BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0011.0001.p         (216 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc3367 [C] COG1804 Predicted acyl-CoA transferases/carnitine de...    64   2e-10

>RSc3367 [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase
           Rso Ralstonia solanacearum
          Length = 482

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 12  SGAWKTRRGFDSLVQMSSGIAEAGMRRLGRDKPTPLPVQALDHATGYLMATAAIRGLTQR 71
           +G W  RRGFDSLVQ +SG   A     G  +P PLP QALDHA GYLMA  A+  L +R
Sbjct: 335 AGPWADRRGFDSLVQTASGFNRAEAEAAGEARPRPLPAQALDHAAGYLMAAGAMAALARR 394

Query: 72  LKTGKGSEVLTSLARMAQLLVTGSGKQVDAALAAAIEMFCN 112
           L  G    V  SLA+ A  L  G G+ +D  L AA   + +
Sbjct: 395 LTEGGSWHVRVSLAQTAHWL-RGLGR-LDHGLGAADPRYED 433