BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0010.0003.p         (109 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ECs2882 [M] COG0845 Membrane-fusion protein Ecs Escherichia coli...    59   3e-09
yegM [M] COG0845 Membrane-fusion protein Eco Escherichia coli K12      59   4e-09
YPO2847 [M] COG0845 Membrane-fusion protein Ype Yersinia pestis        57   1e-08

>ECs2882 [M] COG0845 Membrane-fusion protein Ecs Escherichia coli O157:H7
          Length = 464

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 14/93 (15%)

Query: 27  WSLFHRADAVAASK---EQAQQAPS-----------ISVTTVQVQERDIPLYLSGVGTVT 72
           W    R D+ +A+    +QAQQ+P+             V      E+ +P YL+G+GT+T
Sbjct: 73  WFWQGRNDSQSAAPGATKQAQQSPAGGRRGMRSGPLAPVQAATAVEQAVPRYLTGLGTIT 132

Query: 73  ANASVVVKVRIDGQLDKVGFTEGQDVKAGQLLA 105
           A  +V V+ R+DGQL  + F EGQ VKAG LLA
Sbjct: 133 AANTVTVRSRVDGQLMALHFQEGQQVKAGDLLA 165


>yegM [M] COG0845 Membrane-fusion protein Eco Escherichia coli K12
          Length = 464

 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 14/93 (15%)

Query: 27  WSLFHRADAVAAS---KEQAQQAPS-----------ISVTTVQVQERDIPLYLSGVGTVT 72
           W    R D+ +A+    +QAQQ+P+             V      E+ +P YL+G+GT+T
Sbjct: 73  WFWQGRNDSRSAAPGATKQAQQSPAGGRRGMRSGPLAPVQAATAVEQAVPRYLTGLGTIT 132

Query: 73  ANASVVVKVRIDGQLDKVGFTEGQDVKAGQLLA 105
           A  +V V+ R+DGQL  + F EGQ VKAG LLA
Sbjct: 133 AANTVTVRSRVDGQLIALHFQEGQQVKAGDLLA 165


>YPO2847 [M] COG0845 Membrane-fusion protein Ype Yersinia pestis
          Length = 444

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 36/48 (75%)

Query: 58  ERDIPLYLSGVGTVTANASVVVKVRIDGQLDKVGFTEGQDVKAGQLLA 105
           E+++P YL+G+GTV A  +V V  R+DG+L  + FTEGQ VKAG LLA
Sbjct: 71  EQEVPRYLTGLGTVIAANTVTVTSRVDGELMALHFTEGQQVKAGDLLA 118