BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0301.p         (334 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC1198 Non COG                                                        273   4e-73
Cj0554 Non COG                                                        253   5e-67

>CC1198 Non COG
          Length = 331

 Score =  273 bits (698), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 152/336 (45%), Positives = 196/336 (58%), Gaps = 8/336 (2%)

Query: 1   MQLTIELAAAYTEMPLTYLRQEYPNHIMHVLHSADDVLSPRAMHPVFYGCYDWHSAVHGY 60
           M L    A+ + ++ L +L +EYPN + HV+  +DDV SPR +HP+FYG +DWHS VHGY
Sbjct: 1   MSLARSTASRFAKIALGHLTREYPNKLDHVMGGSDDVRSPRDLHPIFYGSFDWHSCVHGY 60

Query: 61  WLLLRCAKLYPALPTQDKITAIFDEHFTPALMAQETAYFQVGGRASFERPYGFGWILGLA 120
           WLL    +L P +     I A+FD+ FT   +A E AY        FERPYG+ W L L 
Sbjct: 61  WLLATLLRLRPEMSEAPTIIALFDDAFTQEKVAGEVAYLARPESRGFERPYGWAWSLMLQ 120

Query: 121 QELAASSHPRAAAWHAAMQPLTLEIRKRLLEYLGKLTYPIRVGTHYNTAFALALALDYAR 180
            EL     P    W     PL L  ++R   +L    YP+R GTHYNTAFALALA ++A 
Sbjct: 121 AELLRHDRP----WAQTHAPLALAFKQRFETFLPIADYPVRAGTHYNTAFALALAYEFAE 176

Query: 181 AAKDGALESAIIQASQGYYGKDADYPAHYEPGGDEYISAALTEALLMSKVLDARAFPAWF 240
              D A    +   +  +YG+DAD  A +EP GD+++S AL EA  M ++L    F  WF
Sbjct: 177 MTGDQAFFDLLQNRALVWYGQDADCQA-WEPSGDDFLSPALMEAEAMRRLLPRERFDLWF 235

Query: 241 DTFLPQIDKIE--RLMQPAQVSDRTDPKIAHLDGLNLSRAWCMKHIARHLPSAHAAQPAL 298
             FLP +   +   L  PA+VSDRTD KIAHLDGLNLSRAWC + +A  +     AQ   
Sbjct: 236 PRFLPSLADKQPATLFTPARVSDRTDGKIAHLDGLNLSRAWCWRLLAGSMSEHDPAQAHA 295

Query: 299 SGAIERHLKASVDHVVGSHYSGGHWLASFALLALED 334
             A   HL A+V H+ G  Y G HWLA+FALLALE+
Sbjct: 296 VNAAMSHLAAAVPHLAGD-YMGEHWLATFALLALEN 330


>Cj0554 Non COG
          Length = 334

 Score =  253 bits (645), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 185/327 (56%), Gaps = 8/327 (2%)

Query: 11  YTEMPLTYLRQEYPNHIMHVLHSADDVLSPRAMHPVFYGCYDWHSAVHGYWLLLRCAKLY 70
           ++ + L  + +E PN I H  +  +D+  P+ M+P+FYG YDWHS+VH +WLL++  K +
Sbjct: 8   FSFIALENIFRELPNKITHSFNDINDIKPPKLMYPIFYGSYDWHSSVHSHWLLVKILKDF 67

Query: 71  PALPTQDKITAIFDEHFTPALMAQETAYFQVGGRASFERPYGFGWILGLAQE--LAASSH 128
                +D+I    D  F+      E  Y Q      FERPYG+GW L L  E  L A  +
Sbjct: 68  SHFAPKDEIIKALDSQFSKEKAEGELKYLQNPAHKGFERPYGWGWFLKLTLEINLLAKEN 127

Query: 129 PRAAAWHAAMQPLTLEIRKRLLEYLGKLTYPIRVGTHYNTAFALALALDYARAAKDGALE 188
            +A  W   ++ +     K   E+L K+ YPIRVGTH+N++FAL  AL+YAR  KD  LE
Sbjct: 128 DKAEIWAKNLEGIADFFVKEFKEFLPKMDYPIRVGTHFNSSFALYFALEYARFKKDQELE 187

Query: 189 SAIIQASQGYYGKDADYPAHYEPGGDEYISAALTEALLMSKVLDARAFPAWFDTFLPQID 248
             IIQ+++ ++  D +  A  EP GDE++S  L EA+L+S VL    F  +F  +LP ++
Sbjct: 188 YCIIQSAKKWFLNDKNMQA-LEPCGDEFLSPVLMEAVLLSAVLHKNDFVKFFKAYLPNLE 246

Query: 249 KIE--RLMQPAQVSDRTDPKIAHLDGLNLSRAWCMKHIARHLPSAHAAQPALSGAIERHL 306
             E   L  P  VSDR+D KIAHLDGLNLSRAWC K ++         +  L      H 
Sbjct: 247 AKEPATLFTPVSVSDRSDGKIAHLDGLNLSRAWCFKILSNF--CDENLKILLRNNATEHF 304

Query: 307 KASVDHVVGSHYSGGHWLASFALLALE 333
             ++ H +   Y G HWL SFALLAL+
Sbjct: 305 DKAIAH-IEDDYLGSHWLGSFALLALD 330