BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0294.p         (145 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp1188 [J] COG0251 Putative translation initiation inhibitor, y...   157   6e-39
SMb21157 [J] COG0251 Putative translation initiation inhibitor, ...   150   7e-37
SMb21139 [J] COG0251 Putative translation initiation inhibitor, ...   149   3e-36
AGl1839 [J] COG0251 Putative translation initiation inhibitor, y...   102   2e-22
AGpA326 [J] COG0251 Putative translation initiation inhibitor, y...    95   4e-20

>RSp1188 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Rso Ralstonia solanacearum
          Length = 128

 Score =  157 bits (398), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 80/105 (76%), Positives = 88/105 (83%)

Query: 1   MSIKRYGVDGGKGTGGQHLPFARAVEADGWLYVSGQVAMVDGEVIDGGIVAQSHQAIKNV 60
           M+I R GV+GG GTGGQHLPFARA  ADGWL+VSGQ  MV GEV+  GIV Q+HQ +KN+
Sbjct: 1   MTITRIGVEGGTGTGGQHLPFARAAGADGWLFVSGQTPMVGGEVVGHGIVEQTHQTLKNL 60

Query: 61  LAILKEAGYGPEHVVRCGVWLDDTRDFQSFNKVFKEYFGANPLTR 105
           LAIL EAGYGPEHVVRCGVWLDD RDF SFN+VFKEYFGANP  R
Sbjct: 61  LAILAEAGYGPEHVVRCGVWLDDPRDFPSFNRVFKEYFGANPPAR 105


>SMb21157 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Sme Sinorhizobium meliloti
          Length = 129

 Score =  150 bits (380), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 77/112 (68%), Positives = 91/112 (81%), Gaps = 6/112 (5%)

Query: 1   MSIKRYGVDGGKGTGGQHLPFARAVEADGWLYVSGQVAMVDGEVIDGGIVAQSHQAIKNV 60
           MSIKRYG +   G GG+ LPFARAVEA GWL+VSGQVAM +GE+I G IVAQ+H+AI N+
Sbjct: 1   MSIKRYGAEQ-VGAGGKTLPFARAVEAGGWLHVSGQVAMENGEIIGGNIVAQTHKAIGNL 59

Query: 61  LAILKEAGYGPEHVVRCGVWLDDTRDFQSFNKVFKEYFGANPLTRKXPAPAC 112
           LAILKEAGYG EHVVR GVWLDD RDF SFN+++++YFGA+P     PA AC
Sbjct: 60  LAILKEAGYGVEHVVRVGVWLDDPRDFWSFNRIYQDYFGAHP-----PARAC 106


>SMb21139 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Sme Sinorhizobium meliloti
          Length = 127

 Score =  149 bits (375), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 76/112 (67%), Positives = 88/112 (78%), Gaps = 6/112 (5%)

Query: 1   MSIKRYGVDGGKGTGGQHLPFARAVEADGWLYVSGQVAMVDGEVIDGGIVAQSHQAIKNV 60
           M+IKRYG  G  G G QHLPFARAVEA+GWLYVSGQVAM  GE++ GGIVA+S +AI+N+
Sbjct: 1   MTIKRYGT-GETGAGKQHLPFARAVEANGWLYVSGQVAMEAGEIVGGGIVAESRKAIENM 59

Query: 61  LAILKEAGYGPEHVVRCGVWLDDTRDFQSFNKVFKEYFGANPLTRKXPAPAC 112
           +AIL EAGYG E VVR GVWLDD RDF +FN V+ +YFGANP     PA AC
Sbjct: 60  IAILHEAGYGLEDVVRVGVWLDDPRDFWTFNGVYAQYFGANP-----PARAC 106


>AGl1839 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 178

 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 50/91 (54%), Positives = 62/91 (68%)

Query: 15  GGQHLPFARAVEADGWLYVSGQVAMVDGEVIDGGIVAQSHQAIKNVLAILKEAGYGPEHV 74
           GGQ  PFA+AV A  ++YVSGQV  VDGEV+ GGIVAQ+ Q + N+  +L  AG     V
Sbjct: 64  GGQRRPFAKAVRAGDFVYVSGQVPTVDGEVVTGGIVAQTEQVVANIRDVLALAGCTLADV 123

Query: 75  VRCGVWLDDTRDFQSFNKVFKEYFGANPLTR 105
           V+  VWLDD RDF SFN VF++YF  +P  R
Sbjct: 124 VKVNVWLDDARDFSSFNAVFQKYFIDHPPAR 154


>AGpA326 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 130

 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 48/101 (47%), Positives = 63/101 (62%), Gaps = 1/101 (0%)

Query: 5   RYGVDGGKGTGGQHLPFARAVEADGWLYVSGQVAMVDGEVIDGGIVAQSHQAIKNVLAIL 64
           RY V   +  GGQ  PFA+AV A  ++YVSGQV   DGE+I G IVAQ+ + I N++ +L
Sbjct: 8   RYAVADAQA-GGQRRPFAKAVRAGDFVYVSGQVPTFDGEIIVGNIVAQTERVIANIIEVL 66

Query: 65  KEAGYGPEHVVRCGVWLDDTRDFQSFNKVFKEYFGANPLTR 105
             A      VV+   WLDD RDF SFN VF+++F  +P  R
Sbjct: 67  ALAECTLADVVKVNAWLDDARDFSSFNAVFQKHFIDHPPAR 107