BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0285.p         (93 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC2448 Non COG                                                         69   4e-12
mlr5485 [R] COG4976 Predicted methyltransferase (contains TPR re...    67   1e-11
SMc02241 [R] COG4976 Predicted methyltransferase (contains TPR r...    65   5e-11
AGc3455 [R] COG4976 Predicted methyltransferase (contains TPR re...    60   9e-10

>CC2448 Non COG
          Length = 401

 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 4/84 (4%)

Query: 5   SYLEKHFDRYAETFNANLVGSLGYRGPQLMAQGLDIIGAAGKQY-DVLDLGCGTGLCAPI 63
           +Y+E  FD +AE F+  L+ +L Y+ P L+A+   +IG A +++  +LDLGCGTGL  P 
Sbjct: 201 AYVEALFDAFAERFDHQLLDNLEYQTPTLLAE---MIGVADRRFTHMLDLGCGTGLAGPP 257

Query: 64  VAAHARSLTGVDLSGKMLDQARAR 87
           + A    LTGVDLS  ML +A  R
Sbjct: 258 LRARVARLTGVDLSTAMLAKAAER 281


>mlr5485 [R] COG4976 Predicted methyltransferase (contains TPR repeat) Mlo
           Mesorhizobium loti
          Length = 284

 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 1/87 (1%)

Query: 6   YLEKHFDRYAETFNANLVGSLGYRGPQLMAQGLDIIGAAGKQYDVLDLGCGTGLCAPIVA 65
           ++E  FD YAETF   LVG L YR P+ + Q +      G+    LDLGCGTGL    + 
Sbjct: 83  FVEALFDHYAETFEEMLVGKLDYRLPEFLEQMIRK-ARPGRFRLALDLGCGTGLMGERLR 141

Query: 66  AHARSLTGVDLSGKMLDQARARAVVTT 92
                L GVD+S +ML +ARA+ +  T
Sbjct: 142 PLVDRLEGVDISARMLKKARAKGIYDT 168


>SMc02241 [R] COG4976 Predicted methyltransferase (contains TPR repeat) Sme
           Sinorhizobium meliloti
          Length = 312

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 47/84 (55%)

Query: 6   YLEKHFDRYAETFNANLVGSLGYRGPQLMAQGLDIIGAAGKQYDVLDLGCGTGLCAPIVA 65
           Y+E+ FD YAE F+  LV  LGY  P+ +A  +  +   G+   V DLGCGTGL    + 
Sbjct: 104 YVERLFDDYAERFDHALVEKLGYSVPEKLAAVIGRVNGGGRFRHVTDLGCGTGLFGERIR 163

Query: 66  AHARSLTGVDLSGKMLDQARARAV 89
             A  L G DLS  ML +A A+ V
Sbjct: 164 DRADFLEGFDLSANMLAKAEAKGV 187


>AGc3455 [R] COG4976 Predicted methyltransferase (contains TPR repeat) Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 274

 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 1/90 (1%)

Query: 3   SDSYLEKHFDRYAETFNANLVGSLGYRGPQLMAQGLDIIGAAGKQYDVLDLGCGTGLCAP 62
            D+Y+E  FD++AE F   LV  LGY  P ++ Q L  +   G    +LDLGCGTGL   
Sbjct: 66  PDAYVETLFDQHAEAFEDILVEQLGYAVPMMVRQRLQTLNL-GPFKRLLDLGCGTGLTGE 124

Query: 63  IVAAHARSLTGVDLSGKMLDQARARAVVTT 92
            +   A  +TG+D+S  M++ A  + +  T
Sbjct: 125 ALRDMADDITGIDISENMVEIAHEKDLYET 154