BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0245.p (317 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1132 [O] COG1281 Disulfide bond chaperones of the HSP33 famil... 354 2e-97 PA5193 [O] COG1281 Disulfide bond chaperones of the HSP33 family... 245 1e-64 NMA0441 [O] COG1281 Disulfide bond chaperones of the HSP33 famil... 231 2e-60 NMB2000 [O] COG1281 Disulfide bond chaperones of the HSP33 famil... 227 3e-59 STM3498 [O] COG1281 Disulfide bond chaperones of the HSP33 famil... 223 5e-58 >RSc1132 [O] COG1281 Disulfide bond chaperones of the HSP33 family Rso Ralstonia solanacearum Length = 338 Score = 354 bits (908), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 184/338 (54%), Positives = 243/338 (71%), Gaps = 28/338 (8%) Query: 8 MKDTLQKFMVENAPVRGELVEISSTWQQVLARRDYPVAVKALLGQMLSAAALLTANLKFN 67 M D L+KF+ + APVRGELV + TWQ+VL RR YP V+ LLG M++AAALL+ANLKFN Sbjct: 1 MTDELKKFVFDAAPVRGELVRLEGTWQEVLRRRHYPAPVRTLLGGMMAAAALLSANLKFN 60 Query: 68 GMVVMQIHGDGPVRLLVVECDSELRLRATAKLVEDAEVADDATLTQLVNANGEGRFAITL 127 G ++MQ+HGDGP+R+LVVEC+S+L +RATAKLVE A++ADDATL LVN +G GRFAITL Sbjct: 61 GALIMQLHGDGPLRMLVVECNSDLSMRATAKLVEGAQIADDATLASLVNQHGHGRFAITL 120 Query: 128 DPKDKMPGQQAYQGIVPLDGD-----TVATVIENYMLRSEQLDTKLWLAADDKVARGLLL 182 DP+DK+PGQQ YQGIVPL + ++ V+E+YM SEQLDT+LWLAADDK+A G+LL Sbjct: 121 DPQDKLPGQQPYQGIVPLSDEHGPLTSMTAVLEHYMQTSEQLDTRLWLAADDKIASGMLL 180 Query: 183 QKLPNHGG----------KDVGKAAPE-------EELETWNRLSMLGNTLRAEELLSTDI 225 Q+LP++GG +VG+ ++L+TW R+ LG TLR +ELL + Sbjct: 181 QRLPSYGGAMEGHPGHGPAEVGETGQPLREDVHGQDLDTWERVCQLGATLRRDELLEQPV 240 Query: 226 ETLMHRLFWEET----IRVFDPAHPEFHCTCSREKVGNMLKMLGQAEVEDALSTQ-EKLS 280 +TL+ RL+WEE IR+F+P P F C+C+R +VG ML+ LGQ E++D L + K+ Sbjct: 241 DTLIKRLYWEEMEHAGIRMFEPVLPRFRCSCTRLRVGAMLRTLGQEEIDDILQERGGKVE 300 Query: 281 VDCDFCGLHYEFDAVDCAQIFRTETPADAVPQ-TDTRH 317 +DC+FCG HY FDAVDCAQ+F +T V +D RH Sbjct: 301 IDCEFCGQHYAFDAVDCAQLFAQDTVVQGVQSASDQRH 338 >PA5193 [O] COG1281 Disulfide bond chaperones of the HSP33 family Pae Pseudomonas aeruginosa Length = 297 Score = 245 bits (625), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 135/312 (43%), Positives = 196/312 (62%), Gaps = 17/312 (5%) Query: 7 TMKDTLQKFMVENAPVRGELVEISSTWQQVLARRDYPVAVKALLGQMLSAAALLTANLKF 66 + D Q+F+ ++ VRGE+V++ ++ +VLA+ YP V LLG+ML+AA+LL LKF Sbjct: 2 SHSDQSQRFLFDDTDVRGEMVDLERSYSEVLAKHPYPEPVAQLLGEMLAAASLLCGTLKF 61 Query: 67 NGMVVMQIHGDGPVRLLVVECDSELRLRATAKLVEDAEVADDATLTQLVNANGEGRFAIT 126 +G++V+Q G V LL+VEC S+ ++R A+ ++ + DA + +L+ EG +T Sbjct: 62 DGLLVLQARSSGAVPLLMVECSSDRQVRGLARYSAES-IGADAGMQELMP---EGVLTLT 117 Query: 127 LDPKDKMPGQQAYQGIVPLDGDTVATVIENYMLRSEQLDTKLWLAADDKVARGLLLQKLP 186 +DP + GQ+ YQGIV L+G +A + NY SEQL T+ WL A+ + ARGLLLQ+LP Sbjct: 118 VDP---VKGQR-YQGIVALEGVNLAECLSNYFASSEQLPTRFWLNANGRRARGLLLQQLP 173 Query: 187 NHGGKDVGKAAPEEELETWNRLSMLGNTLRAEELLSTDIETLMHRLFWEETIRVFDPAHP 246 KD PE +W L+ L +TL AEELL+ D ET++HRL+ EET+R+F+P Sbjct: 174 ADRLKD-----PEAREASWQHLTTLADTLTAEELLALDNETVLHRLYHEETVRLFEPQPL 228 Query: 247 EFHCTCSREKVGNMLKMLGQAEVEDALSTQE-KLSVDCDFCGLHYEFDAVDCAQIFRTET 305 FHC+CSRE+ N L LGQA+ E L +E +S+DC FC Y FDA D AQ+F Sbjct: 229 VFHCSCSRERSANALVSLGQADCERLLEEEEGSISIDCQFCNQRYLFDASDVAQLF---A 285 Query: 306 PADAVPQTDTRH 317 A + ++TRH Sbjct: 286 GAGSQGPSETRH 297 >NMA0441 [O] COG1281 Disulfide bond chaperones of the HSP33 family NmA Neisseria meningitidis Z2491 Length = 328 Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 127/294 (43%), Positives = 179/294 (60%), Gaps = 20/294 (6%) Query: 10 DTLQKFMVENAPVRGELVEISSTWQQVLARRDYPVAVKALLGQMLSAAALLTANLKFNGM 69 D +F+ ++ PVRG V + + WQ ++ +++YP A++ LG++L+A LL+ NLK G Sbjct: 36 DVRTRFIFDDMPVRGLHVRLENVWQHIVKQKNYPAAIRRALGELLAAGVLLSGNLKNEGT 95 Query: 70 VVMQIHGDGPVRLLVVECDSELRLRATAKLVEDAEVADDATLTQLVNANGEGRFAITLDP 129 +++Q+ G G +++LV E S+ +RATA+ E AE+ADD +L L+ G F +TL P Sbjct: 96 LIVQVQGQGRLKMLVAEATSDRTVRATARWDETAEIADDESLGDLLGEG--GVFVLTLQP 153 Query: 130 KDKMPGQQAYQGIVPLDGDTVATVIENYMLRSEQLDTKLWLAADDKVARGLLLQKLPNHG 189 KD P +QG+VPL+GD +A ++ NYM RSEQLDT + L+A D+ A GLL+Q+L Sbjct: 154 KDGEP----WQGVVPLEGDGIAQMLVNYMKRSEQLDTHIVLSASDEAAGGLLVQRL---- 205 Query: 190 GKDVGKAAPEEEL--ETWNRLSMLGNTLRAEELLSTDIETLMHRLFWEETIRVFDPAHPE 247 PEE L E W +S L TL AEEL D + +++RLF E RVF+P E Sbjct: 206 --------PEEVLDEEAWEHVSTLARTLTAEELAGLDAQHVLYRLFHETPPRVFEPETFE 257 Query: 248 FHCTCSREKVGNMLKMLGQAEVEDALSTQEKLSVDCDFCGLHYEFDAVDCAQIF 301 F CTCSR KV +ML MLG EV + Q + VDCDFC Y FD D +F Sbjct: 258 FSCTCSRGKVSDMLLMLGGEEVGGVVVEQGSIEVDCDFCHSKYVFDETDVNALF 311 >NMB2000 [O] COG1281 Disulfide bond chaperones of the HSP33 family Nme Neisseria meningitidis MC58 Length = 302 Score = 227 bits (579), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 126/294 (42%), Positives = 178/294 (60%), Gaps = 20/294 (6%) Query: 10 DTLQKFMVENAPVRGELVEISSTWQQVLARRDYPVAVKALLGQMLSAAALLTANLKFNGM 69 D +F+ ++ PVRG V + + WQ ++ +++YP A++ LG++L+A LL+ NLK G Sbjct: 10 DVRTRFIFDDMPVRGLHVRLENVWQHIVKQKNYPAAIRRALGELLAAGVLLSGNLKNEGT 69 Query: 70 VVMQIHGDGPVRLLVVECDSELRLRATAKLVEDAEVADDATLTQLVNANGEGRFAITLDP 129 +++Q+ G G +++LV E S+ +RATA+ E AE+ADD +L L+ G F +TL P Sbjct: 70 LIVQVQGRGRLKMLVAEAASDRTVRATARWDETAEIADDESLGDLLGEG--GVFVLTLQP 127 Query: 130 KDKMPGQQAYQGIVPLDGDTVATVIENYMLRSEQLDTKLWLAADDKVARGLLLQKLPNHG 189 KD P +QG+VPL+G +A ++ NYM RSEQLDT + L+A D+ A GLL+Q+L Sbjct: 128 KDGEP----WQGVVPLEGGGIAQMLVNYMKRSEQLDTHIVLSASDEAAGGLLVQRL---- 179 Query: 190 GKDVGKAAPEEEL--ETWNRLSMLGNTLRAEELLSTDIETLMHRLFWEETIRVFDPAHPE 247 PEE L E W +S L TL AEEL D + +++RLF E RVF+P E Sbjct: 180 --------PEEVLDEEAWEHVSTLARTLTAEELAGLDAQHVLYRLFHETPPRVFEPETFE 231 Query: 248 FHCTCSREKVGNMLKMLGQAEVEDALSTQEKLSVDCDFCGLHYEFDAVDCAQIF 301 F CTCSR KV +ML MLG EV + Q + VDCDFC Y FD D +F Sbjct: 232 FSCTCSRGKVSDMLLMLGGEEVGGVVVEQGSIEVDCDFCHSKYVFDETDVNALF 285 >STM3498 [O] COG1281 Disulfide bond chaperones of the HSP33 family Sty Salmonella typhimurium LT2 Length = 294 Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 120/303 (39%), Positives = 185/303 (61%), Gaps = 23/303 (7%) Query: 10 DTLQKFMVENAPVRGELVEISSTWQQVLARRDYPVAVKALLGQMLSAAALLTANLKFNGM 69 D L +++ EN VRGELV +S T QQ+L +YP VK +L ++L A +LLTA LKF G Sbjct: 7 DQLHRYLFENFAVRGELVTVSETLQQILDNHNYPQPVKTVLAELLVATSLLTATLKFAGD 66 Query: 70 VVMQIHGDGPVRLLVVECDSELRLRATAKLVEDAEVADDATLTQLVNANGEGRFAITLDP 129 + +Q+ GDGP+ L V+ +++ ++R A++ D + D+A L LV G G IT+ P Sbjct: 67 ITVQLQGDGPLSLAVINGNNQQQMRGVARVQGD--IPDNADLKTLV---GNGYLVITITP 121 Query: 130 KDKMPGQQAYQGIVPLDGDTVATVIENYMLRSEQLDTKLWLAADD----KVARGLLLQKL 185 ++ + YQG+V L+GDT+A +E+Y LRSEQL T+L++ D A G+LLQ + Sbjct: 122 EEG----ERYQGVVGLEGDTLAACLEDYFLRSEQLPTRLFIRTGDVDGKPAAGGMLLQVM 177 Query: 186 PNHGGKDVGKAAPEEELETWNRLSMLGNTLRAEELLSTDIETLMHRLFWEETIRVFDPAH 245 P A + E ++ L+ML T+++EELL+ ++ RL+ EE + ++DP + Sbjct: 178 P----------AQNAQAEDFDHLAMLTETIKSEELLTLPANDVLWRLYHEEEVTLYDPQN 227 Query: 246 PEFHCTCSREKVGNMLKMLGQAEVEDALSTQEKLSVDCDFCGLHYEFDAVDCAQIFRTET 305 EF CTCSRE+ LK L EV+ L+ + ++ + CD+CG HY F+A+D A+I + Sbjct: 228 VEFKCTCSRERCAGALKTLPDEEVDSILAEEGEIDMHCDYCGNHYLFNAMDIAEIRNNAS 287 Query: 306 PAD 308 PAD Sbjct: 288 PAD 290