BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0216.p         (137 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RP109 [C] COG0280 Phosphotransacetylase Rpr Rickettsia prowazekii     180   8e-46
CAC3076 [C] COG0280 Phosphotransacetylase Cac Clostridium acetob...   143   8e-35
TM1130 [C] COG0280 Phosphotransacetylase Tma Thermotoga maritima      141   4e-34
BS_yqiS [C] COG0280 Phosphotransacetylase Bsu Bacillus subtilis       137   9e-33
RC0147 [C] COG0280 Phosphotransacetylase Rco Rickettsia conorii       128   4e-30

>RP109 [C] COG0280 Phosphotransacetylase Rpr Rickettsia prowazekii
          Length = 351

 Score =  180 bits (456), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 89/133 (66%), Positives = 107/133 (80%)

Query: 2   QQPRVAILAAVETVNARMAATLDAAALCKMADRGQISGAILDGPLAFDNAVSIAAARVKG 61
           +Q RVA+L+AVETV + +  TLDAAAL KMADRGQI+ A++DGPLAFDNA+S+ AA  KG
Sbjct: 208 KQVRVAVLSAVETVTSAIPTTLDAAALSKMADRGQITNAVVDGPLAFDNAISLFAAEAKG 267

Query: 62  IVSEVAGRADILVVPDLESGNMLAKQLEYLGGAASAGIVLGARVPIVLTSRADSRESRIA 121
           I S V+G ADILVVPDLESGNMLAKQL+YLG A  AGIVLGARVPI+LTSRAD  + R+ 
Sbjct: 268 ISSPVSGNADILVVPDLESGNMLAKQLKYLGQAVMAGIVLGARVPIILTSRADPIDMRVI 327

Query: 122 SCAIALLLANCAR 134
           SC +A  + N  +
Sbjct: 328 SCVLASFIYNQTK 340


>CAC3076 [C] COG0280 Phosphotransacetylase Cac Clostridium acetobutylicum
          Length = 301

 Score =  143 bits (361), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 66/130 (50%), Positives = 96/130 (73%)

Query: 1   VQQPRVAILAAVETVNARMAATLDAAALCKMADRGQISGAILDGPLAFDNAVSIAAARVK 60
           ++ P+VA + AVE +N +M +TLDAA L KM+DRGQI G ++DGPLA D A+S  AA  K
Sbjct: 169 IENPKVAPICAVEVINPKMPSTLDAAMLSKMSDRGQIKGCVVDGPLALDIALSEEAAHHK 228

Query: 61  GIVSEVAGRADILVVPDLESGNMLAKQLEYLGGAASAGIVLGARVPIVLTSRADSRESRI 120
           G+  EVAG+ADI ++P++E+GN++ K L Y   + + GI++G   P+VLTSRADS E+++
Sbjct: 229 GVTGEVAGKADIFLMPNIETGNVMYKTLTYTTDSKNGGILVGTSAPVVLTSRADSHETKM 288

Query: 121 ASCAIALLLA 130
            S A+A L+A
Sbjct: 289 NSIALAALVA 298


>TM1130 [C] COG0280 Phosphotransacetylase Tma Thermotoga maritima
          Length = 294

 Score =  141 bits (356), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 68/130 (52%), Positives = 94/130 (72%)

Query: 1   VQQPRVAILAAVETVNARMAATLDAAALCKMADRGQISGAILDGPLAFDNAVSIAAARVK 60
           ++ P+VA++ A+E VN +M  T++AA L KM  RGQI G I+DGP A DN VS  AA+ K
Sbjct: 165 LETPKVAVVGAIEVVNPKMPITMEAAILSKMNQRGQIKGCIVDGPFALDNVVSEEAAKKK 224

Query: 61  GIVSEVAGRADILVVPDLESGNMLAKQLEYLGGAASAGIVLGARVPIVLTSRADSRESRI 120
           GI S VAG+ADIL++PD+E+ N+L K L +L  A SA  +LG +VP+VLTSRADS E++ 
Sbjct: 225 GIQSPVAGKADILILPDIEAANILYKALVFLAKAKSASTILGGKVPVVLTSRADSEETKF 284

Query: 121 ASCAIALLLA 130
            S A++ + A
Sbjct: 285 YSIALSAVFA 294


>BS_yqiS [C] COG0280 Phosphotransacetylase Bsu Bacillus subtilis
          Length = 299

 Score =  137 bits (344), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 73/132 (55%), Positives = 93/132 (70%), Gaps = 4/132 (3%)

Query: 4   PRVAILAAVETVNARMAATLDAAALCKMADRGQISGAILDGPLAFDNAVSIAAARVKGIV 63
           P+ A LAAVETVN +M AT++AAAL +M  RGQI G I+DGPLA DNAVS  AA  K I 
Sbjct: 168 PKAAALAAVETVNPKMEATVNAAALAQMYKRGQIKGCIVDGPLALDNAVSQIAAAQKKIS 227

Query: 64  SEVAGRADILVVPDLESGNMLAKQLEYLGGAASAGIVLGARVPIVLTSRADSRESRIASC 123
            +VAG  DIL+VP +E+GN+L K L Y   A+ A ++ GA+ PI LTSRADS E+++ S 
Sbjct: 228 GDVAGNPDILLVPTIEAGNILYKSLIYFAKASVAAVITGAKAPIALTSRADSAENKLYSI 287

Query: 124 AIALLLANCARE 135
           A+A+    CA E
Sbjct: 288 ALAI----CASE 295


>RC0147 [C] COG0280 Phosphotransacetylase Rco Rickettsia conorii
          Length = 155

 Score =  128 bits (321), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/95 (68%), Positives = 76/95 (80%)

Query: 3   QPRVAILAAVETVNARMAATLDAAALCKMADRGQISGAILDGPLAFDNAVSIAAARVKGI 62
           Q RVA+L+ VETV + +  TLDAAAL +M DRGQI+ AI+DGPLAFDNA+S+ AA  K I
Sbjct: 45  QVRVAVLSVVETVTSAIPTTLDAAALSQMVDRGQITNAIVDGPLAFDNAISLFAAEAKCI 104

Query: 63  VSEVAGRADILVVPDLESGNMLAKQLEYLGGAASA 97
            S V+G ADILVVPDLESGNMLAKQL+YLG A  A
Sbjct: 105 SSSVSGNADILVVPDLESGNMLAKQLKYLGQAVMA 139