BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0195.p         (178 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XF0596 [S] COG3656 Predicted periplasmic protein Xfa Xylella fas...   186   2e-47
CC3060 Non COG                                                        181   5e-46

>XF0596 [S] COG3656 Predicted periplasmic protein Xfa Xylella fastidiosa
           9a5c
          Length = 174

 Score =  186 bits (472), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 88/163 (53%), Positives = 112/163 (68%), Gaps = 1/163 (0%)

Query: 12  ALSAALTGLVWSPAVAADLNVKVEIPRLNVAEYHRPYVAVWLERPDQSVAATLAVWYDVK 71
            L+ AL+GL+  P  A  LN+ +EIP L+VAEYHRPYVA+W+E  DQ VA  LA+WY   
Sbjct: 4   TLTIALSGLLSMPTYATTLNITIEIPTLSVAEYHRPYVAIWIEDADQKVAHNLAIWYQRN 63

Query: 72  KKDKEGEKWLKDLRQWWRRTGREVHMPVDGVSGATRPAGDQQLTLSSDKGPLAQLPAGDY 131
                G KWL +LRQWWR++GR V +P+DGV+G TRPAG   L+L   K  L  LP G Y
Sbjct: 64  GDKTHGTKWLPELRQWWRKSGRTVELPIDGVTGPTRPAGRYTLSLDEQKQ-LKHLPPGKY 122

Query: 132 ILMVEAAREVGGREVVKVPLQWPPKSAQTAKGKGESELGAITL 174
            L+VEA REVGGRE++K+P  WP  + QT +  G+SELG +TL
Sbjct: 123 TLVVEATREVGGRELLKIPFTWPVTTIQTGQALGKSELGTVTL 165


>CC3060 Non COG
          Length = 171

 Score =  181 bits (460), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 88/150 (58%), Positives = 106/150 (70%), Gaps = 2/150 (1%)

Query: 29  DLNVKVEIPRLNVAEYHRPYVAVWLERP-DQSVAATLAVWYDVKKKDKEGEKWLKDLRQW 87
           DLNV VE+P+LNVAEYH+PYVA+W+E P D + A TLAVWYD K ++  G KWLKD+RQW
Sbjct: 23  DLNVTVEVPKLNVAEYHKPYVAIWIENPADSTAAGTLAVWYDAKNREDNGAKWLKDMRQW 82

Query: 88  WRRTGREVHMPVDGVSGATRPAGDQQLTLSSDKGPLAQLPAGDYILMVEAAREVGGREVV 147
           WR+ GRE+  P DGVSGATR  G  +L  S  KG L  L  G Y L+VEAAREVGG E V
Sbjct: 83  WRKAGREMSFPADGVSGATRAPGPHKLVFSGAKGALKSLKPGQYNLVVEAAREVGGHEAV 142

Query: 148 KVPLQWPPKSAQTAKGKGESELGAITLDYK 177
           +VP  W  K  + A  KG +ELGA+T+  K
Sbjct: 143 RVPFAW-GKPGKPASAKGSAELGAVTVSVK 171