BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0190.p         (158 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2634 [O] COG0484 DnaJ-class molecular chaperone with C-termin...   265   3e-71
NMB0059 [O] COG0484 DnaJ-class molecular chaperone with C-termin...   204   8e-53
NMA0209 [O] COG0484 DnaJ-class molecular chaperone with C-termin...   204   8e-53
HI1238 [O] COG0484 DnaJ-class molecular chaperone with C-termina...   192   3e-49
YPO0469 [O] COG0484 DnaJ-class molecular chaperone with C-termin...   191   5e-49

>RSc2634 [O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn
           finger domain Rso Ralstonia solanacearum
          Length = 380

 Score =  265 bits (677), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 120/157 (76%), Positives = 141/157 (89%)

Query: 1   VKIPEGIDDGMRIRSSGNGEPGMNGGPPGDLYVEIHIRQHEVFQRDGDDLHCEMPISFAK 60
           VKIP GID+GMRIRSSGNGEPG+NGGPPGDLYVEIHI+ H VF+RDGDDLHC+MPISFA 
Sbjct: 222 VKIPAGIDEGMRIRSSGNGEPGINGGPPGDLYVEIHIKAHSVFERDGDDLHCQMPISFAV 281

Query: 61  AALGGDIEAPTLSGKASFTIPEGTQSGKTFRLRGKGIKGVRSGYAGDLFCHVVVETPVKL 120
           AA+GGDIE PTL G+ +F +PEGTQ+GKTFRLRGKGIKGVRSGYAGDL+ HVV+ETPV+L
Sbjct: 282 AAMGGDIEVPTLGGRVTFNVPEGTQAGKTFRLRGKGIKGVRSGYAGDLYVHVVIETPVRL 341

Query: 121 TERQKDLLREFEKLTAEGGAKHSPQTKTWKDKVKEFF 157
           TE Q++LLR+F+K   EGG++HSPQ ++W DKVK FF
Sbjct: 342 TEHQRELLRQFDKSVHEGGSRHSPQEQSWLDKVKNFF 378


>NMB0059 [O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn
           finger domain Nme Neisseria meningitidis MC58
          Length = 373

 Score =  204 bits (518), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 92/158 (58%), Positives = 122/158 (77%), Gaps = 1/158 (0%)

Query: 1   VKIPEGIDDGMRIRSSGNGEPGMNGGPPGDLYVEIHIRQHEVFQRDGDDLHCEMPISFAK 60
           V IP GIDDG RIR SG G PGM+G P GDLYV + IR H++FQRDG DLHCE+PISFA 
Sbjct: 217 VNIPAGIDDGQRIRLSGEGGPGMHGAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFAT 276

Query: 61  AALGGDIEAPTLSGKASFTIPEGTQSGKTFRLRGKGIKGVRSGYAGDLFCHVVVETPVKL 120
           AALGG++E PTL GK   T+P+ TQ+G+  R++GKG+K +RS   GDL+CH+VVETPV L
Sbjct: 277 AALGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPVNL 336

Query: 121 TERQKDLLREFEKLTAEGGAKHSPQTKTWKDKVKEFFE 158
           T+RQK+LL EFE+++  G    +P+ K++ DK+++ F+
Sbjct: 337 TDRQKELLEEFERIST-GLENQTPRKKSFLDKLRDLFD 373


>NMA0209 [O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn
           finger domain NmA Neisseria meningitidis Z2491
          Length = 373

 Score =  204 bits (518), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 92/158 (58%), Positives = 122/158 (77%), Gaps = 1/158 (0%)

Query: 1   VKIPEGIDDGMRIRSSGNGEPGMNGGPPGDLYVEIHIRQHEVFQRDGDDLHCEMPISFAK 60
           V IP GIDDG RIR SG G PGM+G P GDLYV + IR H++FQRDG DLHCE+PISFA 
Sbjct: 217 VNIPAGIDDGQRIRLSGEGGPGMHGAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFAT 276

Query: 61  AALGGDIEAPTLSGKASFTIPEGTQSGKTFRLRGKGIKGVRSGYAGDLFCHVVVETPVKL 120
           AALGG++E PTL GK   T+P+ TQ+G+  R++GKG+K +RS   GDL+CH+VVETPV L
Sbjct: 277 AALGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPVNL 336

Query: 121 TERQKDLLREFEKLTAEGGAKHSPQTKTWKDKVKEFFE 158
           T+RQK+LL EFE+++  G    +P+ K++ DK+++ F+
Sbjct: 337 TDRQKELLEEFERIST-GLENQTPRKKSFLDKLRDLFD 373


>HI1238 [O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn
           finger domain Hin Haemophilus influenzae
          Length = 394

 Score =  192 bits (487), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 89/159 (55%), Positives = 117/159 (73%), Gaps = 1/159 (0%)

Query: 1   VKIPEGIDDGMRIRSSGNGEPGMNGGPPGDLYVEIHIRQHEVFQRDGDDLHCEMPISFAK 60
           VKIP G+D G ++R +G G  G NG P GDLYV IH+R+H +F+RDG +L+CE+PISFA 
Sbjct: 229 VKIPAGVDTGNQLRLAGKGAAGENGAPAGDLYVVIHVREHNIFERDGSNLYCEVPISFAT 288

Query: 61  AALGGDIEAPTLSGKASFTIPEGTQSGKTFRLRGKGIKGVRSGYAGDLFCHVVVETPVKL 120
           AALGG+IE PTL G+    IP  TQ+GK FR+RGKG+   RSGYAGDL C +VVETPV L
Sbjct: 289 AALGGEIEVPTLDGRVKLKIPAETQTGKLFRMRGKGVASTRSGYAGDLICRIVVETPVNL 348

Query: 121 TERQKDLLREFEK-LTAEGGAKHSPQTKTWKDKVKEFFE 158
           T  QK+LL + E+ L  +  +KH+P++  + D VK+FF+
Sbjct: 349 TSEQKELLHKLEESLQGKDLSKHAPKSSGFLDGVKKFFD 387


>YPO0469 [O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn
           finger domain Ype Yersinia pestis
          Length = 379

 Score =  191 bits (485), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 90/159 (56%), Positives = 118/159 (74%), Gaps = 1/159 (0%)

Query: 1   VKIPEGIDDGMRIRSSGNGEPGMNGGPPGDLYVEIHIRQHEVFQRDGDDLHCEMPISFAK 60
           VKIP G+D G RIR SG GE G +G P GDLYV++ ++ H +F+R+G++L+CE+PI+FA 
Sbjct: 217 VKIPAGVDTGDRIRLSGEGEAGEHGAPSGDLYVQVQVKAHPIFEREGNNLYCEVPINFAM 276

Query: 61  AALGGDIEAPTLSGKASFTIPEGTQSGKTFRLRGKGIKGVRSGYAGDLFCHVVVETPVKL 120
           AALGG+IE PTL G+    IP  TQ+GK FR+RGKG+K VR G  GDL C VVVETPV L
Sbjct: 277 AALGGEIEVPTLDGRVKLKIPAETQTGKMFRMRGKGVKSVRGGSQGDLLCRVVVETPVSL 336

Query: 121 TERQKDLLREFEK-LTAEGGAKHSPQTKTWKDKVKEFFE 158
           +E+QK LLRE E+      G K+SP+ K++ D VK+FF+
Sbjct: 337 SEKQKQLLRELEESFVGAAGEKNSPRAKSFLDGVKKFFD 375