BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0187.p (213 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2629 [F] COG1428 Deoxynucleoside kinases Rso Ralstonia solana... 182 4e-46 DR0299 [F] COG1428 Deoxynucleoside kinases Dra Deinococcus radio... 148 7e-36 SA0515 [F] COG1428 Deoxynucleoside kinases Sau Staphylococcus au... 123 3e-28 BS_yaaG [F] COG1428 Deoxynucleoside kinases Bsu Bacillus subtilis 120 2e-27 BS_yaaF [F] COG1428 Deoxynucleoside kinases Bsu Bacillus subtilis 107 2e-23 >RSc2629 [F] COG1428 Deoxynucleoside kinases Rso Ralstonia solanacearum Length = 214 Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 94/210 (44%), Positives = 128/210 (60%) Query: 1 MDLDSYHYIVIEGPIGVGKTTLARKLADRLGVQAVLEQPQENPFLEKFYRDAGRYALQTQ 60 M LD IV+EGPIG GKT LA++LAD L + E P++NPFL +FY + RYAL Q Sbjct: 1 MALDHLRRIVVEGPIGAGKTALAQRLADHLRAATLFETPEDNPFLARFYEEPARYALPVQ 60 Query: 61 MFFLFQRIQQLQELAQSDLFNTRFVGDFLLEKDPLFARLTLADEELKLYEQLYQHMRTHA 120 + FL QR Q+L ++ L R V D L +D LFA+LTL +EL LY+ + Q + Sbjct: 61 LRFLLQRAQRLAAWQKATLAGERIVADSFLPRDRLFAQLTLPADELALYDAMAQALALPP 120 Query: 121 VQPDLVIYLQAPVETLIERIRKRGIPMEASISHDYLQRLGDSYSRFFYNYDAAPLLIVNN 180 + DLV+ LQA E L+ RI +R +P EA I +YL+R+ +Y F YDAAP LIV+ Sbjct: 121 QRIDLVVCLQARAEDLLPRIARRAVPYEAGIDAEYLERICAAYGELFLYYDAAPTLIVDT 180 Query: 181 EHMNMADSDEDFELLLSHIIEMRGKRAFLN 210 + A +D+DF LL+ I MRG + F+ Sbjct: 181 AAFDPAGNDDDFRTLLTRIDAMRGPKEFIK 210 >DR0299 [F] COG1428 Deoxynucleoside kinases Dra Deinococcus radiodurans Length = 205 Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 81/192 (42%), Positives = 110/192 (57%), Gaps = 1/192 (0%) Query: 8 YIVIEGPIGVGKTTLARKLADRLGVQAVLEQPQENPFLEKFYRDAGRYALQTQMFFLFQR 67 Y+V+EGPIGVGKT+LA++LA R G + LE +ENPFL KFY YA Q Q FFL R Sbjct: 2 YVVVEGPIGVGKTSLAQRLAQRSGAELNLEVVEENPFLAKFYEQPQAYAFQVQAFFLLSR 61 Query: 68 IQQLQELAQSDLFNTRFVGDFLLEKDPLFARLTLADEELKLYEQLYQHMRTHAVQPDLVI 127 +QL +L Q L+ V D+L +KD +FA + L D E LY+ LY H+ PDLV+ Sbjct: 62 FKQLSQLWQPGLYRPEVVSDYLFDKDFIFAAMNLRDAEFDLYQDLYGHLSPRLPTPDLVV 121 Query: 128 YLQAPVETLIERIRKRGIPMEASISHDYLQRLGDSYSRFFYNYDAAPLLIVNNEHMNMAD 187 YL+A L+ RI +RG P E + YL L Y +F Y A P LI+ + + Sbjct: 122 YLRADPPELLRRIARRGRPFEHDMKAAYLADLTGRYDDYFRTY-AHPHLILEAGNYDFVA 180 Query: 188 SDEDFELLLSHI 199 ++ D + + I Sbjct: 181 NEADQQAIFDQI 192 >SA0515 [F] COG1428 Deoxynucleoside kinases Sau Staphylococcus aureus N315 Length = 205 Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 114/199 (57%), Gaps = 5/199 (2%) Query: 8 YIVIEGPIGVGKTTLARKLADRLGVQAVLEQPQENPFLEKFYRDAGRYALQTQMFFLFQR 67 +I IEGPIGVGK++LA KL+ L E ENPFL FY D +++ QT+MFFL R Sbjct: 5 FIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDISKWSFQTEMFFLCNR 64 Query: 68 IQQLQELAQSDLFNTRFVGDFLLEKDPLFARLTLADEELKLYEQLYQHMRTHAVQPDLVI 127 +Q Q++ Q N V D+ + K+ +FA+ TL+ E + + ++Y + + P+++I Sbjct: 65 YKQFQDVTQ---LNQGVVSDYHIHKNKIFAKNTLSPVEFQKFSKIYDILTEDMIMPNMII 121 Query: 128 YLQAPVETLIERIRKRGIPMEASISHDYLQRLGDSYSRFFYNY--DAAPLLIVNNEHMNM 185 +L A ++ L RI KR E I +YL +L Y ++ + + + +++++ ++ Sbjct: 122 FLDADLDVLKSRIAKRNRSFEHQIEDEYLLKLKKDYREYYESLQSNGSNVVLIDTTSIDF 181 Query: 186 ADSDEDFELLLSHIIEMRG 204 +++D+E +L I+ M G Sbjct: 182 LKNEQDYEDILHIILPMIG 200 >BS_yaaG [F] COG1428 Deoxynucleoside kinases Bsu Bacillus subtilis Length = 207 Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 117/207 (56%), Gaps = 9/207 (4%) Query: 3 LDSYHYIVIEGPIGVGKTTLARKLADRLGVQAVLEQPQENPFLEKFYRDAGRYALQTQMF 62 +++ +I IEGPIG GKTTLA L+ + G + E ++NP+L+KFY + ++ Q +MF Sbjct: 1 MNTAPFIAIEGPIGAGKTTLATMLSQKFGFPMINEIVEDNPYLDKFYDNIKEWSFQLEMF 60 Query: 63 FLFQRIQQLQELAQSDLFNTR---FVGDFLLEKDPLFARLTLADEELKLYEQLYQHMRTH 119 FL R +QL++ SD F + + D+ + K+ +FA TL+ +L+ Y+++Y + Sbjct: 61 FLCHRYKQLED--TSDHFLKKGQPVIADYHIYKNVIFAERTLSPHQLEKYKKIYHLLTDD 118 Query: 120 AVQPDLVIYLQAPVETLIERIRKRGIPMEASISHDYLQRLGDSYSRFFYNYDAA----PL 175 +P+ +IY++A + TL+ RI KRG P E I YL++L Y A + Sbjct: 119 LPKPNFIIYIKASLPTLLHRIEKRGRPFEKKIETSYLEQLISDYEVAIKQLQEADPELTV 178 Query: 176 LIVNNEHMNMADSDEDFELLLSHIIEM 202 L V+ + + + DFE + +H+ E+ Sbjct: 179 LTVDGDSKDFVLNKSDFERIAAHVKEL 205 >BS_yaaF [F] COG1428 Deoxynucleoside kinases Bsu Bacillus subtilis Length = 217 Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 108/199 (54%), Gaps = 11/199 (5%) Query: 9 IVIEGPIGVGKTTLARKLADRLGVQAVLEQPQENPFLEKFYRDAGRYALQTQMFFLFQRI 68 I + G +GVGK+TL + LA RLG + LE+ NP+LEKFY D R++ Q++FL +R Sbjct: 12 ITVAGTVGVGKSTLTKTLAKRLGFKTSLEEVDHNPYLEKFYHDFERWSFHLQIYFLAERF 71 Query: 69 QQLQELAQSDLFNTRFVGD-FLLEKDPLFARL-----TLADEELKLYEQLYQH--MRTHA 120 ++ + + ++ FV D + E +FA++ T++ + K Y L++ M + Sbjct: 72 KEQKTIFEA---GGGFVQDRSIYEDTGIFAKMHADKGTMSKVDYKTYTSLFEAMVMTPYF 128 Query: 121 VQPDLVIYLQAPVETLIERIRKRGIPMEASISHDYLQRLGDSYSRFFYNYDAAPLLIVNN 180 PD++IYL+ +E ++ RI +RG ME S Y + + Y + ++A P+L + Sbjct: 129 PHPDVLIYLEGDLENILNRIEQRGREMELQTSRSYWEEMHTRYENWISGFNACPVLKLRI 188 Query: 181 EHMNMADSDEDFELLLSHI 199 E ++ + + E ++ I Sbjct: 189 EDYDLLNDENSIENIVDQI 207