BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0132.p (332 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0985 [KE] COG1167 Transcriptional regulators containing a DNA... 311 2e-84 PAB2227 [KE] COG1167 Transcriptional regulators containing a DNA... 223 4e-58 PH0207 [KE] COG1167 Transcriptional regulators containing a DNA-... 223 5e-58 DR1588 [KE] COG1167 Transcriptional regulators containing a DNA-... 212 1e-54 Ta1193 [KE] COG1167 Transcriptional regulators containing a DNA-... 203 4e-52 >RSc0985 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Rso Ralstonia solanacearum Length = 406 Score = 311 bits (796), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 144/230 (62%), Positives = 177/230 (76%) Query: 103 GARLLYSLPNFQNPTGRTLPLERRFALVEACARLGLPLIEDDPYGALSYRNDPLPKMLNM 162 GAR Y++PNFQNPTGR LPLERR ALV LG+ L+EDDPYG LSY D LP + ++ Sbjct: 169 GARFFYTIPNFQNPTGRRLPLERRQALVARAKELGVLLVEDDPYGELSYTGDALPSLRSL 228 Query: 163 NPAGVIYMGSFSKVLTPGIRLGYVVAPTPLILKMEQAKQAADLHTAQLTQMVVYEAIKDG 222 NP GV+YMGSFSK+L PG+RLGY++AP P+ K+ QAKQA+DLHT TQ V YE +K G Sbjct: 229 NPDGVVYMGSFSKILAPGMRLGYIIAPEPIHFKLVQAKQASDLHTPSFTQRVAYEVLKTG 288 Query: 223 FLQTHIPTIRKLYADQCQAMLDALQTYFPAGTSWTRPEGGMFIWVTLPAHIDSGALLKEA 282 L THIP+IR LY QC+ MLDAL + PAG W RPEGGMFIWV +P ID+ ALL++A Sbjct: 289 LLDTHIPSIRTLYGKQCETMLDALTRHMPAGVHWNRPEGGMFIWVEVPEGIDTMALLEKA 348 Query: 283 VEQHVAFVPGAPFYANEPQQNTLRLSFVTVPPEKIRAGIERLGKLIAAKL 332 V ++VAFVPGAPFYAN P++NT+RL+FVTV PE+I GI LG+LI A++ Sbjct: 349 VARNVAFVPGAPFYANAPRRNTMRLAFVTVSPERIEQGITVLGELIRAEI 398 >PAB2227 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Pab Pyrococcus abyssi Length = 410 Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 105/238 (44%), Positives = 153/238 (64%), Gaps = 1/238 (0%) Query: 92 DVCTRCRTSRXGARLLYSLPNFQNPTGRTLPLERRFALVEACARLGLPLIEDDPYGALSY 151 D + + +++Y++P FQNP G T+ ERR L+E + L +IEDDPYG L Y Sbjct: 167 DELRKLKAEGKKVKIVYTVPTFQNPAGVTMSEERRKHLIELASEYDLIVIEDDPYGELRY 226 Query: 152 RNDPLPKMLNMNPAG-VIYMGSFSKVLTPGIRLGYVVAPTPLILKMEQAKQAADLHTAQL 210 P K+ ++ G VIY+G+FSK+L PG R+G++V +I K+E AKQ+ DL T Sbjct: 227 SGKPKKKIKALDKEGRVIYLGTFSKILAPGFRIGWIVGDPGIIRKLEIAKQSTDLCTNVF 286 Query: 211 TQMVVYEAIKDGFLQTHIPTIRKLYADQCQAMLDALQTYFPAGTSWTRPEGGMFIWVTLP 270 Q+V ++ + +G L HIP IR+ Y + AML+AL+ + P WT+PEGGMF+WVTLP Sbjct: 287 GQVVAWKYVSEGHLDRHIPKIREFYKPRRDAMLEALEEFMPENVKWTKPEGGMFVWVTLP 346 Query: 271 AHIDSGALLKEAVEQHVAFVPGAPFYANEPQQNTLRLSFVTVPPEKIRAGIERLGKLI 328 IDS +L++AV++ VA+VPG FYA +NT+RL+F V +KIR G++RL + I Sbjct: 347 DGIDSKKMLEKAVKKGVAYVPGEAFYAYRDVKNTMRLNFTYVDEDKIREGVKRLAETI 404 >PH0207 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Pho Pyrococcus horikoshii Length = 428 Score = 223 bits (568), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 105/230 (45%), Positives = 152/230 (66%), Gaps = 1/230 (0%) Query: 104 ARLLYSLPNFQNPTGRTLPLERRFALVEACARLGLPLIEDDPYGALSYRNDPLPKMLNMN 163 +++Y++P FQNP G T+ +RR L+E + ++EDDPYG L Y +P K+ ++ Sbjct: 197 VKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALD 256 Query: 164 PAG-VIYMGSFSKVLTPGIRLGYVVAPTPLILKMEQAKQAADLHTAQLTQMVVYEAIKDG 222 G VIY+G+FSK+L PG R+G++V +I KME AKQ+ DL T Q+V + + G Sbjct: 257 NEGRVIYLGTFSKILAPGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGG 316 Query: 223 FLQTHIPTIRKLYADQCQAMLDALQTYFPAGTSWTRPEGGMFIWVTLPAHIDSGALLKEA 282 +L+ HIP IRK Y + AML+AL+ + P G WT+PEGGMFIWVTLP IDS +L+ A Sbjct: 317 YLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGIDSKKMLERA 376 Query: 283 VEQHVAFVPGAPFYANEPQQNTLRLSFVTVPPEKIRAGIERLGKLIAAKL 332 +++ VA+VPG FYA+ +NT+RL+F V +KI GI+RL + I +L Sbjct: 377 IKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEEL 426 >DR1588 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Dra Deinococcus radiodurans Length = 420 Score = 212 bits (539), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 111/229 (48%), Positives = 149/229 (65%), Gaps = 10/229 (4%) Query: 105 RLLYSLPNFQNPTGRTLPLERRFALVEACARLGLPLIEDDPYGALSYRNDPLPKM--LNM 162 +LLY++PNFQNPTGRTL LERR LVE A+ G+ +IEDDPYG L + + LP + + + Sbjct: 186 KLLYAIPNFQNPTGRTLSLERRRRLVELTAQYGVLVIEDDPYGQLRFSGEALPSLYEIGL 245 Query: 163 NPAG------VIYMGSFSKVLTPGIRLGYVVAPTPLILKMEQAKQAADLHTAQLTQMVVY 216 AG VIY SFSK L PG+R +V A P+I K+ QAKQ ADLHT L QM++ Sbjct: 246 ELAGDVDRNHVIYSSSFSKTLVPGLRDAWVEAAAPVITKLIQAKQGADLHTPTLNQMMIT 305 Query: 217 EAIKDGFLQTHIPTIRKLYADQCQAMLDALQTYFPAGTSWTRPEGGMFIWVTLPAHIDSG 276 E + L I T++ Y ++ ML + +FPAG ++TRP+GGMF+WVTLP +D+ Sbjct: 306 ELLP--LLPAQIETVKAAYRERGAHMLSQMDEFFPAGVTYTRPQGGMFLWVTLPEGVDTV 363 Query: 277 ALLKEAVEQHVAFVPGAPFYANEPQQNTLRLSFVTVPPEKIRAGIERLG 325 ALL AVE VA+VPG PF+A NT+R+S+ + PE+I G+ LG Sbjct: 364 ALLPRAVENKVAYVPGQPFFALGGGANTMRMSYSSATPEQITQGMRALG 412 >Ta1193 [KE] COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs Tac Thermoplasma acidophilum Length = 402 Score = 203 bits (517), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 94/229 (41%), Positives = 145/229 (63%), Gaps = 1/229 (0%) Query: 105 RLLYSLPNFQNPTGRTLPLERRFALVEACARLGLPLIEDDPYGALSYRNDPLPKMLNMNP 164 + +Y +P FQNP G T+ L+RR L+E R +P++ED+PYG L Y DP+P + +M+ Sbjct: 170 KFIYVIPTFQNPAGTTMVLDRRKQLLEISKRYEIPIVEDNPYGQLRYDGDPVPSIKSMDD 229 Query: 165 AG-VIYMGSFSKVLTPGIRLGYVVAPTPLILKMEQAKQAADLHTAQLTQMVVYEAIKDGF 223 G VIY+G+FSKV+ PG+RLGYV+A ++ K+ KQ DL + L++ + YE +K G Sbjct: 230 DGNVIYLGTFSKVMAPGLRLGYVIADRQIVEKINLVKQGLDLASDSLSEYIAYEYLKRGD 289 Query: 224 LQTHIPTIRKLYADQCQAMLDALQTYFPAGTSWTRPEGGMFIWVTLPAHIDSGALLKEAV 283 + IP LY + ML ++ YFP G +T+P GGMF+WV+L ID+ +L+ A+ Sbjct: 290 IYRQIPKTVSLYRKKRDLMLKSIAEYFPEGVKYTKPNGGMFLWVSLDEKIDTTRMLERAL 349 Query: 284 EQHVAFVPGAPFYANEPQQNTLRLSFVTVPPEKIRAGIERLGKLIAAKL 332 + VA+V GA FY + + N++RL+F +KI GI+RL +I ++ Sbjct: 350 KAKVAYVSGAAFYPHGEKHNSMRLNFTYSDDDKIVEGIKRLAYVINEEM 398