BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0100.p         (65 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0566 [S] COG4391 Uncharacterized protein conserved in bacteri...    76   2e-14

>RSc0566 [S] COG4391 Uncharacterized protein conserved in bacteria Rso
          Ralstonia solanacearum
          Length = 65

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 3  QVQQTQPV-QLDGKDLPAHCPNPNMPHWSSHPRVFLELDDHGAAKCPYCGTQYQLKPGAV 61
             QT P+ ++   DLP HCP    P W+ HPRVFL++ D G AKCPYCGT Y+L PG  
Sbjct: 1  MTTQTAPIIEIGADDLPLHCPTSKTPAWNYHPRVFLDVADTGEAKCPYCGTVYKLAPGVE 60

Query: 62 VKAH 65
          VK H
Sbjct: 61 VKGH 64