BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0081.p         (235 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2717 [S] COG2353 Uncharacterized conserved protein Rso Ralsto...   207   1e-53
NMA1457 [S] COG2353 Uncharacterized conserved protein NmA Neisse...   121   1e-27
NMB1030 [S] COG2353 Uncharacterized conserved protein Nme Neisse...   116   4e-26
PA4926 [E] COG1305 Transglutaminase-like enzymes, putative cyste...   107   3e-23
STM1621 [S] COG2353 Uncharacterized conserved protein Sty Salmon...   105   7e-23

>RSc2717 [S] COG2353 Uncharacterized conserved protein Rso Ralstonia
           solanacearum
          Length = 198

 Score =  207 bits (527), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 92/138 (66%), Positives = 114/138 (82%), Gaps = 1/138 (0%)

Query: 23  TYTIDPSHTYPSFEADHMG-ISVWRGKFTKTSGTVTLDRAAKTGSLDITIDASSVDFGHA 81
           TY +DPSHTYPSFEADHMG +S WRGKF K++G VTLDR AK G++D+T+   S+DFG A
Sbjct: 24  TYQLDPSHTYPSFEADHMGGLSKWRGKFEKSNGVVTLDREAKAGTIDVTVQTDSIDFGFA 83

Query: 82  KLNDHVKGPDVFDVQKFPTATYKGTSIKFEGDKPVAVDGELTLHGVTKPVQLKINKFTCI 141
           K+N+H KGPD+FDV K+PTAT+KGT  KF+GD P   +G+LTLHGVTKPV+L+I+ F C+
Sbjct: 84  KMNEHAKGPDLFDVTKYPTATFKGTFTKFKGDAPTEAEGQLTLHGVTKPVKLEIDSFKCM 143

Query: 142 QHPMLKREVCGADASHAW 159
           QHPMLKREVCGADA   +
Sbjct: 144 QHPMLKREVCGADAEMKF 161


>NMA1457 [S] COG2353 Uncharacterized conserved protein NmA Neisseria
           meningitidis Z2491
          Length = 187

 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/134 (43%), Positives = 75/134 (55%)

Query: 23  TYTIDPSHTYPSFEADHMGISVWRGKFTKTSGTVTLDRAAKTGSLDITIDASSVDFGHAK 82
           TY +D  H    F  DH   S   G F   +G+V  D+A + G +DITI  +++  G   
Sbjct: 21  TYKVDEYHANARFSIDHFNTSTNVGGFYGLTGSVEFDQAKRDGKIDITIPVANLQSGSQH 80

Query: 83  LNDHVKGPDVFDVQKFPTATYKGTSIKFEGDKPVAVDGELTLHGVTKPVQLKINKFTCIQ 142
             DH+K  D+FD  ++P   +  T   F G K V+VDG LT+HG T PV+LK  KF C Q
Sbjct: 81  FTDHLKSADIFDAAQYPDIRFVSTKFNFNGKKLVSVDGNLTMHGKTAPVKLKAEKFNCYQ 140

Query: 143 HPMLKREVCGADAS 156
            PMLK EVCG D S
Sbjct: 141 SPMLKTEVCGGDFS 154


>NMB1030 [S] COG2353 Uncharacterized conserved protein Nme Neisseria
           meningitidis MC58
          Length = 187

 Score =  116 bits (290), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 56/133 (42%), Positives = 73/133 (54%)

Query: 24  YTIDPSHTYPSFEADHMGISVWRGKFTKTSGTVTLDRAAKTGSLDITIDASSVDFGHAKL 83
           Y +D  H    F  DH   S   G F   +G+V  D+A + G +DITI  +++  G    
Sbjct: 22  YKVDEYHANARFAIDHFNTSTNVGGFYGLTGSVEFDQAKRDGKIDITIPIANLQSGSQHF 81

Query: 84  NDHVKGPDVFDVQKFPTATYKGTSIKFEGDKPVAVDGELTLHGVTKPVQLKINKFTCIQH 143
            DH+K  D+FD  ++P   +  T   F G K V+VDG LT+HG T PV+LK  KF C Q 
Sbjct: 82  TDHLKSADIFDAAQYPDIRFVSTKFNFNGKKLVSVDGNLTMHGKTAPVKLKAEKFNCYQS 141

Query: 144 PMLKREVCGADAS 156
           PM K EVCG D S
Sbjct: 142 PMEKTEVCGGDFS 154


>PA4926 [E] COG1305 Transglutaminase-like enzymes, putative cysteine
           proteases Pae Pseudomonas aeruginosa
          Length = 311

 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/96 (52%), Positives = 66/96 (68%), Gaps = 5/96 (5%)

Query: 135 INKFTCIQHPMLKREVCGADASHAWVSVYCPGRDGQPGCWIDADPTNGIFPDISHITLGW 194
           ++ +   + P  +  + GADASHAWVS+YCP  +G    W+D DPTN + PD+ HITL W
Sbjct: 221 VSGYLLTRPPPGQARLIGADASHAWVSLYCP-ENG----WVDFDPTNDLLPDLEHITLAW 275

Query: 195 GRDFLDISPLRGVLIGGGQQTMQVAVTVMPSQEVPG 230
           GRDF D+SPLRGV++GGG    +V VTV+P QE  G
Sbjct: 276 GRDFSDVSPLRGVILGGGSHDPEVRVTVLPLQETAG 311


>STM1621 [S] COG2353 Uncharacterized conserved protein Sty Salmonella
           typhimurium LT2
          Length = 191

 Score =  105 bits (263), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 72/134 (53%)

Query: 21  ADTYTIDPSHTYPSFEADHMGISVWRGKFTKTSGTVTLDRAAKTGSLDITIDASSVDFGH 80
           AD Y  D +HT   F  DH   S   G F   SG +      +   + +TI  S+++ G 
Sbjct: 23  ADVYKFDNTHTNAVFNIDHFQTSTNHGGFYAISGELKYQPEKQVAEMRVTIPVSALNTGV 82

Query: 81  AKLNDHVKGPDVFDVQKFPTATYKGTSIKFEGDKPVAVDGELTLHGVTKPVQLKINKFTC 140
              ++H++  D+ D +K+P   +K T   FE +KPV++DG LT+ GVTKPV L   KF C
Sbjct: 83  DAFDNHIRSSDILDAEKYPEMVFKSTKWHFEDNKPVSIDGLLTMKGVTKPVTLTTTKFGC 142

Query: 141 IQHPMLKREVCGAD 154
              P+ K +VCG D
Sbjct: 143 YMSPIFKAQVCGGD 156