BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0069.p         (169 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2724 [LR] COG0494 NTP pyrophosphohydrolases including oxidati...   194   9e-50
PA2625 [LR] COG0494 NTP pyrophosphohydrolases including oxidativ...   137   1e-32
XF1441 [LR] COG0494 NTP pyrophosphohydrolases including oxidativ...   125   4e-29
YPO1639 [LR] COG0494 NTP pyrophosphohydrolases including oxidati...    92   6e-19
STM1235 [LR] COG0494 NTP pyrophosphohydrolases including oxidati...    88   8e-18

>RSc2724 [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage
           repair enzymes Rso Ralstonia solanacearum
          Length = 168

 Score =  194 bits (492), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 97/157 (61%), Positives = 113/157 (71%), Gaps = 3/157 (1%)

Query: 5   WKPSVTVAAIIEREGRFLMIEEQAGDGLRLNQPAGHLDQGETLTQAVVREALEESAHDFE 64
           WKPSVTVAA+IE EGRFL++EE    GLRLNQPAGHLD  E+L  AV REALEE+AH F 
Sbjct: 7   WKPSVTVAAVIEHEGRFLLVEEHTAAGLRLNQPAGHLDPDESLVDAVAREALEETAHSFA 66

Query: 65  PTALVGMYMSRNVSSSRGGADTTYLRFAFAGTLG-LQHDRPLDDGIVRTLWMARDEIAAC 123
           PTA +G YM++       G   TY+R AF G LG     R LDDGIVRT+WM  DEI AC
Sbjct: 67  PTAFLGCYMAQFQPPV--GDPVTYVRMAFTGELGPFDPRRTLDDGIVRTVWMTADEIRAC 124

Query: 124 RERHRSPLVLRCVDDYLSGQRAPLSLLHTDPSVTAST 160
            ERHRSPL+L CV+DYL+G+R PL ++HT PSV   T
Sbjct: 125 PERHRSPLLLACVEDYLAGKRYPLEVIHTHPSVYGLT 161


>PA2625 [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage
           repair enzymes Pae Pseudomonas aeruginosa
          Length = 156

 Score =  137 bits (344), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/156 (48%), Positives = 100/156 (64%), Gaps = 9/156 (5%)

Query: 5   WKPSVTVAAIIEREGRFLMIEEQAGDGLRLNQPAGHLDQGETLTQAVVREALEESAHDFE 64
           W P VTVA I+E +GRFL++EEQA     LNQPAGHL+  E+L +A +RE LEE+  + E
Sbjct: 3   WHPHVTVATIVEDQGRFLLVEEQADGREVLNQPAGHLEPAESLLEAALRETLEETGWEVE 62

Query: 65  PTALVGMYMSRNVSSSRGGADTTYLRFAFAGTLGLQH-DRPLDDGIVRTLWMARDEIAAC 123
            +A+ G+Y+    S+       TY R  FA      H +R LDDGI+   W+ RDE+AA 
Sbjct: 63  LSAVTGIYLYTAPSNG-----VTYQRVCFAARPVRHHPERALDDGIIGPRWLTRDELAAQ 117

Query: 124 RERHRSPLVLRCVDDYLSGQRAPLSLL---HTDPSV 156
            +R RS LVLRC+DDYL+G R PL+L+   H  PS+
Sbjct: 118 PQRWRSHLVLRCIDDYLAGGRYPLALIRDTHVSPSL 153


>XF1441 [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage
           repair enzymes Xfa Xylella fastidiosa 9a5c
          Length = 152

 Score =  125 bits (314), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 91/153 (59%), Gaps = 7/153 (4%)

Query: 3   EVWKPSVTVAAIIEREGRFLMIEEQAGDGLRLNQPAGHLDQGETLTQAVVREALEESAHD 62
           E W+P+VTVA ++      L++EE     L LNQPAGHL+ GE+L QA +RE LEE+   
Sbjct: 6   EHWQPNVTVATVVAHNQHLLLVEETIDGILMLNQPAGHLEPGESLLQAALRETLEETGWK 65

Query: 63  FEPTALVGMYMSRNVSSSRGGADTTYLRFAF-AGTLGLQHDRPLDDGIVRTLWMARDEIA 121
              T+L+G Y+    +S+ G    TYLRFAF A  L      PLD GIVR LW+   E+ 
Sbjct: 66  VRLTSLIGSYLW---TSATG---YTYLRFAFSAEPLTYYPQYPLDVGIVRALWLTPSELQ 119

Query: 122 ACRERHRSPLVLRCVDDYLSGQRAPLSLLHTDP 154
                 RSPLV + + DYLSGQ+APL L+   P
Sbjct: 120 TATPPLRSPLVWQVITDYLSGQQAPLDLVRYVP 152


>YPO1639 [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage
           repair enzymes Ype Yersinia pestis
          Length = 148

 Score = 91.7 bits (226), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 79/150 (52%), Gaps = 8/150 (5%)

Query: 4   VWKPSVTVAAIIEREGRFLMIEEQAGDGLRLNQPAGHLDQGETLTQAVVREALEESAHDF 63
           ++KP VTVA ++  +G+FL++EE   +  R NQPAGHL+  ETL QA  RE  EE+    
Sbjct: 1   MFKPHVTVACVVHTQGKFLIVEETINNEKRWNQPAGHLEADETLIQAAERELWEETGIRA 60

Query: 64  EPTALVGMYMSRNVSSSRGGADTTYLRFAFAGTLGLQ-HDRPLDDGIVRTLWMARDEIAA 122
            P   + M+            +T +LRFAF   L  Q   +P D  I R LW++ DEI  
Sbjct: 61  TPQHFLRMH------QWLAPDNTPFLRFAFVIELPAQLPTQPHDSDIDRCLWLSADEILQ 114

Query: 123 CRERHRSPLVLRCVDDYLSGQRAPLSLLHT 152
                RSPLV   +  YL  +R  L L+ T
Sbjct: 115 STHL-RSPLVAESIRCYLQPERYSLDLIGT 143


>STM1235 [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage
           repair enzymes Sty Salmonella typhimurium LT2
          Length = 153

 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 81/150 (54%), Gaps = 12/150 (8%)

Query: 4   VWKPSVTVAAIIEREGRFLMIEEQAGDGLRLNQPAGHLDQGETLTQAVVREALEESAHDF 63
           ++KP VTVA I+  E +FL++EE        NQPAGHL+  ETL QA  RE  EE+    
Sbjct: 1   MFKPHVTVACIVHAEDKFLVVEETINGKSLWNQPAGHLEADETLAQAAARELWEETGITA 60

Query: 64  EPTALVGMYMSRNVSSSRGGADTTYLRFAFAGTLGLQH---DRPLDDGIVRTLWMARDEI 120
           +P   + M+  + ++  +    T +LRF FA  + L H     P D+ I    W++ DEI
Sbjct: 61  QPQYFIRMH--QWIAPDK----TPFLRFLFA--IKLDHICATDPHDNDIDCCRWVSADEI 112

Query: 121 AACRERHRSPLVLRCVDDYLSGQRAPLSLL 150
                  RSPLV   V  Y +GQR PLS++
Sbjct: 113 LNAPNL-RSPLVAESVRSYQTGQRYPLSIV 141