BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0009.0067.p         (116 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2731 [H] COG0853 Aspartate 1-decarboxylase Rso Ralstonia sola...   192   2e-49
aq_476 [H] COG0853 Aspartate 1-decarboxylase Aae Aquifex aeolicus     143   9e-35
XF0231 [H] COG0853 Aspartate 1-decarboxylase Xfa Xylella fastidi...   132   2e-31
PA4731 [H] COG0853 Aspartate 1-decarboxylase Pae Pseudomonas aer...   132   2e-31
NMB1282 [H] COG0853 Aspartate 1-decarboxylase Nme Neisseria meni...   130   7e-31

>RSc2731 [H] COG0853 Aspartate 1-decarboxylase Rso Ralstonia solanacearum
          Length = 120

 Score =  192 bits (488), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 89/116 (76%), Positives = 104/116 (89%)

Query: 1   MLRAKIHRATVTECDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAIRGRR 60
           MLRAK+HRATVT+ DL+YEGSCGIDEDLL+AAD+RE+EKIELYNVNNGERFSTY I+G+R
Sbjct: 5   MLRAKLHRATVTQADLDYEGSCGIDEDLLDAADMREYEKIELYNVNNGERFSTYIIKGKR 64

Query: 61  GSGEISLNGAAARRAHLGDLLIICTYAPMTDAEIASYVPKIVFVDDKNHITSLKAI 116
           GSGEISLNGAAARRAH+GD LIICTYAPM + E+A+Y PKIV + D N I  +KA+
Sbjct: 65  GSGEISLNGAAARRAHVGDKLIICTYAPMNEEEVANYKPKIVLLGDGNRIKEIKAV 120


>aq_476 [H] COG0853 Aspartate 1-decarboxylase Aae Aquifex aeolicus
          Length = 124

 Score =  143 bits (361), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 64/114 (56%), Positives = 86/114 (75%)

Query: 1   MLRAKIHRATVTECDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAIRGRR 60
           ML++KIHR TVT+ DL+YEGS  +DE L+E AD++ FEKI++YN+NNG RF TY I   R
Sbjct: 5   MLKSKIHRLTVTDADLHYEGSLSLDEYLMELADLKPFEKIDVYNINNGARFQTYVIPAPR 64

Query: 61  GSGEISLNGAAARRAHLGDLLIICTYAPMTDAEIASYVPKIVFVDDKNHITSLK 114
            SGE+ LNGAAAR  H GDL+II +YA  T+ E+ +Y PK++FV++KN    +K
Sbjct: 65  YSGEVKLNGAAARLGHKGDLIIIASYAQYTEEELENYAPKLIFVNEKNQPVEVK 118


>XF0231 [H] COG0853 Aspartate 1-decarboxylase Xfa Xylella fastidiosa 9a5c
          Length = 142

 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 81/111 (72%)

Query: 1   MLRAKIHRATVTECDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAIRGRR 60
           +L+AKIHRATV+  +LNYEGS  ID  LLEAA + EFEK+ ++NV NG RF+TYAIR   
Sbjct: 21  LLKAKIHRATVSHSELNYEGSIAIDGLLLEAAGLYEFEKVHIWNVTNGARFTTYAIRAEH 80

Query: 61  GSGEISLNGAAARRAHLGDLLIICTYAPMTDAEIASYVPKIVFVDDKNHIT 111
           GSG IS+NG AAR   +GDL+I+  +A M++ E A + P +V+VD  N +T
Sbjct: 81  GSGIISVNGGAARYVQVGDLVIVAAFAQMSEDEAAVFSPNLVYVDAANAMT 131


>PA4731 [H] COG0853 Aspartate 1-decarboxylase Pae Pseudomonas aeruginosa
          Length = 126

 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 86/111 (77%)

Query: 1   MLRAKIHRATVTECDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAIRGRR 60
           ML+AK+HRA VT   L+YEGSC ID D L+ + IRE+E+I++YN++NGERF+TYAIR   
Sbjct: 5   MLKAKLHRAEVTHAVLDYEGSCAIDGDWLDLSGIREYEQIQIYNIDNGERFTTYAIRAEN 64

Query: 61  GSGEISLNGAAARRAHLGDLLIICTYAPMTDAEIASYVPKIVFVDDKNHIT 111
           GS  IS+NGAAA +A +GD +IIC YA  ++AE+AS+ P+++++   N ++
Sbjct: 65  GSKMISVNGAAAHKAKVGDRVIICAYAHYSEAELASHKPRMLYMAPGNQLS 115


>NMB1282 [H] COG0853 Aspartate 1-decarboxylase Nme Neisseria meningitidis
           MC58
          Length = 127

 Score =  130 bits (327), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 64/110 (58%), Positives = 79/110 (71%)

Query: 1   MLRAKIHRATVTECDLNYEGSCGIDEDLLEAADIREFEKIELYNVNNGERFSTYAIRGRR 60
           ML  KIHRATVTE DLNY GS  +D+DLL+AA I   EK+ + N NNGERF TY I G+R
Sbjct: 5   MLGGKIHRATVTEADLNYVGSITVDQDLLDAAGIYPNEKVAIVNNNNGERFETYTIAGKR 64

Query: 61  GSGEISLNGAAARRAHLGDLLIICTYAPMTDAEIASYVPKIVFVDDKNHI 110
           GSG I LNGAAAR    GD++II +Y  +++ EIA++ PK+V VD  N I
Sbjct: 65  GSGVICLNGAAARLVQKGDIVIIMSYVQLSEPEIAAHEPKVVLVDGNNKI 114