BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0042.p (205 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0619 [C] COG4117 Thiosulfate reductase cytochrome B subunit (... 243 3e-64 PA4883 [C] COG4117 Thiosulfate reductase cytochrome B subunit (m... 145 5e-35 alr2943 [C] COG4117 Thiosulfate reductase cytochrome B subunit (... 86 7e-17 mlr0877 Non COG 73 4e-13 BMEII0074 [C] COG4117 Thiosulfate reductase cytochrome B subunit... 65 7e-11 >RSc0619 [C] COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) Rso Ralstonia solanacearum Length = 212 Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 125/196 (63%), Positives = 150/196 (76%) Query: 10 TTSAIIHPLWLRVTHWTNALAVVLMILSGWRIYNASPIFPFAFPKAWTLGGWLGGALQWH 69 + SA + P WLR+THW NA+AV++M+LSGWRIYN+SP+F F FP TLGGWL GALQWH Sbjct: 17 SPSATLQPAWLRITHWLNAIAVIIMMLSGWRIYNSSPLFAFRFPNEITLGGWLAGALQWH 76 Query: 70 FAAMWLLAINGVIYLALNLLSGRARRKFFPLRPLEVFQDFVQALKGKLQHASLDHYNAVQ 129 FAAMWLL NG++YLALN+++GR R+F P+ D V AL+G+L HA+L YNA Q Sbjct: 77 FAAMWLLVANGLVYLALNVVTGRFWRRFIPVSIPSALHDMVAALRGRLSHANLAEYNAAQ 136 Query: 130 KLAYLSVIADLVLIVVSGLAIWKSVQLPLLRDLMGGYDNARIVHFFAMSFLVLFIAVHVA 189 KL YL V+A +V+ V+SGLAIWKSVQ PLLR LMGGYD AR VHF MS + LFI VHV Sbjct: 137 KLLYLGVVAVIVITVLSGLAIWKSVQFPLLRMLMGGYDAARWVHFIGMSAIALFIVVHVV 196 Query: 190 MVALVPRTLLAMLRGR 205 M LVPRTL+ MLRGR Sbjct: 197 MTVLVPRTLIIMLRGR 212 >PA4883 [C] COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) Pae Pseudomonas aeruginosa Length = 204 Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 86/159 (54%), Positives = 103/159 (64%), Gaps = 1/159 (0%) Query: 20 LRVTHWTNALAVVLMILSGWRIYNASPIFPFAFPKAWTLGGWLGGALQWHFAAMWLLAIN 79 +R+ HW NA A+ +I SGW IYNASP+ F FP TLGGWLGG++ WH AAMWLL N Sbjct: 10 VRLCHWLNAYAMACLIGSGWGIYNASPLLDFRFPAWATLGGWLGGSIAWHLAAMWLLLGN 69 Query: 80 GVIYLALNLLSGRARRKFFPLRPLEVFQDFVQALKGKLQHASLDHYNAVQKLAYLSVIAD 139 G+ YLA L SG RR F PL V++D AL +L H YNAVQ+L Y V+A Sbjct: 70 GLCYLAYGLSSGHFRRDFLPLSAAGVWRDLRLALGLRLVHEP-GRYNAVQRLLYWLVLAL 128 Query: 140 LVLIVVSGLAIWKSVQLPLLRDLMGGYDNARIVHFFAMS 178 L+V+SGLAIWK VQL L L GG+ AR VHF AM+ Sbjct: 129 GALLVLSGLAIWKPVQLHGLTALFGGFQGARWVHFLAMA 167 >alr2943 [C] COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) Nos Nostoc sp. PCC 7120 Length = 167 Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 91/158 (57%), Gaps = 13/158 (8%) Query: 34 MILSGWRIYNASPIFP----FAFPKAWTLGGWLGGALQWHFAAMWLLAINGVIYLALNLL 89 M+ SG +IYNA+P+F P +TLGGWL G WHFAAMWL ++N + Y L Sbjct: 1 MLTSGLQIYNANPVFGGRAGLHIPPIFTLGGWLAGGRHWHFAAMWLFSLNLLWYGFYILF 60 Query: 90 SGRARRKFFPLRPLEVFQDFVQALKGKLQHASLDHYNAVQKLAYLSVIADLVLIVVSGLA 149 + R R +F V + ++AL+ + L + A ++ Y S+I L+L +++G+ Sbjct: 61 TQRWRHRF-------VGANDIKALQKSQNNKRLIY--AWHRIIYTSIIPILLLALLTGIG 111 Query: 150 IWKSVQLPLLRDLMGGYDNARIVHFFAMSFLVLFIAVH 187 ++K Q P + D+ G + + RIVHF ++ +++F+ VH Sbjct: 112 MYKPAQFPWIVDMFGNWQSLRIVHFASVPMVIIFVIVH 149 >mlr0877 Non COG Length = 293 Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 101/233 (43%), Gaps = 62/233 (26%) Query: 19 WLRVTHWTNALAVVLMILSGWRIYNASP-------------------------------- 46 W R+THW A+++ M+LSG +I+NA P Sbjct: 30 WTRLTHWIWAISLFFMLLSGLQIFNARPQLYIGKQSGFGYNNTIFEIGAVNTDAGPRGFT 89 Query: 47 -IFPFAFPKAWTLG--------------GW--------LGGALQWHFAAMWLLAINGVIY 83 IF F LG W LG A HF W+L +++ Sbjct: 90 EIFGHRFDTTGVLGWSGPPGNETARGFPSWATIPSYYDLGTARVVHFFFAWILTTTLIVW 149 Query: 84 LALNLLSGRARRKFFP-LRPLEVF-QDFVQALKGKLQHASLDHYNAVQKLAYLSVIADLV 141 L +L++G RR P L L+ +D V + K H YN +QK+AY V+ L+ Sbjct: 150 LVASLVNGHIRRDLAPRLDDLKRLPRDIVDHARLKFHHTR--EYNTLQKMAYGGVLFVLL 207 Query: 142 -LIVVSGLAIWKSVQ--LPLLRDLMGGYDNARIVHFFAMSFLVLFIAVHVAMV 191 L++++GLA+ S+ LP L +++GG AR +HF M LV F +H+ M+ Sbjct: 208 PLMIITGLAMSPSMNSVLPFLNEVLGGRQTARTIHFTVMLLLVGFFIIHILMI 260 >BMEII0074 [C] COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) Bme Brucella melitensis Length = 181 Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 55/149 (36%), Positives = 77/149 (51%), Gaps = 13/149 (8%) Query: 51 AFPKAWTLGGW--LGGALQWHFAAMWLLAINGVIYLALNLLSGRARR---KFFPLRPLEV 105 AFP A T+ + L HF W+L +++ +L +G + F +R L Sbjct: 8 AFPPALTIPSYRDLATGRVVHFFFAWVLVATLLLWFTSSLFNGHLKDISPSFTDIRSLP- 66 Query: 106 FQDFVQALKGKLQHASLDHYNAVQKLAYLSVIADLV-LIVVSGLAIWKSVQ--LPLLRDL 162 +DFV+ LK + QH YN +QKL+Y V+ L LIV +GLA+ LPL + Sbjct: 67 -RDFVEHLKFRFQHGK--SYNPLQKLSYFLVLFGLFPLIVATGLAMSPGADSILPL-SEW 122 Query: 163 MGGYDNARIVHFFAMSFLVLFIAVHVAMV 191 +GG AR +HF AM LV F VH+AMV Sbjct: 123 LGGRQTARTLHFVAMLLLVAFFIVHIAMV 151