BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0009.p (258 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2563 [L] COG0323 DNA mismatch repair enzyme (predicted ATPase... 298 9e-81 STM4359 [L] COG0323 DNA mismatch repair enzyme (predicted ATPase... 239 5e-63 ZmutL [L] COG0323 DNA mismatch repair enzyme (predicted ATPase) ... 237 2e-62 ECs5146 [L] COG0323 DNA mismatch repair enzyme (predicted ATPase... 237 2e-62 mutL [L] COG0323 DNA mismatch repair enzyme (predicted ATPase) E... 236 3e-62 >RSc2563 [L] COG0323 DNA mismatch repair enzyme (predicted ATPase) Rso Ralstonia solanacearum Length = 636 Score = 298 bits (763), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 146/200 (73%), Positives = 172/200 (86%), Gaps = 1/200 (0%) Query: 12 RPIQALPDQLISQIAAGEVIERPSAVVKELLENALDAGATHITVRLEQGGVKRIAITDNG 71 RPI+ LPDQLISQIAAGEV+ERP++VVKELLENALDAGAT + ++LE+GGV+RIAITDNG Sbjct: 9 RPIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGATQLQIKLEEGGVRRIAITDNG 68 Query: 72 RGIPPEQMPLALARHATSKIASLTDLENVGTLGFRGEALASIASVAQLTLTTRTADAAHA 131 GIP +++P+AL RHATSKI SL +LE+V TLGFRGEALASIASVA+LTLT+RTA AHA Sbjct: 69 GGIPVDELPVALMRHATSKIGSLEELESVATLGFRGEALASIASVAELTLTSRTAQDAHA 128 Query: 132 WEIIGSQEGSVVPASGAPGTTIDVQDLYFNTPARRKFLKSEQTEYGHCAEVVRRIALARP 191 +II +Q G V PASG GTT+DVQ LYFNTPARRKFLK+EQTE GHC EV+RR ALARP Sbjct: 129 TQII-AQTGRVQPASGGVGTTVDVQHLYFNTPARRKFLKTEQTELGHCLEVIRRTALARP 187 Query: 192 DVTFSLTHNGKTVDHWNTGE 211 DV S+ HNGK ++HWN + Sbjct: 188 DVAISVHHNGKPLEHWNAAQ 207 >STM4359 [L] COG0323 DNA mismatch repair enzyme (predicted ATPase) Sty Salmonella typhimurium LT2 Length = 618 Score = 239 bits (610), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 120/198 (60%), Positives = 157/198 (79%), Gaps = 3/198 (1%) Query: 13 PIQALPDQLISQIAAGEVIERPSAVVKELLENALDAGATHITVRLEQGGVKRIAITDNGR 72 PIQ LP QL +QIAAGEV+ERP++VVKEL+EN+LDAGAT + + +E+GG K I I DNG Sbjct: 2 PIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNGC 61 Query: 73 GIPPEQMPLALARHATSKIASLTDLENVGTLGFRGEALASIASVAQLTLTTRTADAAHAW 132 GI E++ LALARHATSKIASL DLE + +LGFRGEALASI+SV++LTLT+RTA+ A AW Sbjct: 62 GIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEAW 121 Query: 133 EIIG---SQEGSVVPASGAPGTTIDVQDLYFNTPARRKFLKSEQTEYGHCAEVVRRIALA 189 + + +V PA+ GTT++V DL++NTPARRKF+++E+TE+ H E++RRIALA Sbjct: 122 QAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIALA 181 Query: 190 RPDVTFSLTHNGKTVDHW 207 R DVT +L+HNGK V + Sbjct: 182 RFDVTLNLSHNGKLVRQY 199 >ZmutL [L] COG0323 DNA mismatch repair enzyme (predicted ATPase) EcZ Escherichia coli O157:H7 EDL933 Length = 615 Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 120/198 (60%), Positives = 156/198 (78%), Gaps = 3/198 (1%) Query: 13 PIQALPDQLISQIAAGEVIERPSAVVKELLENALDAGATHITVRLEQGGVKRIAITDNGR 72 PIQ LP QL +QIAAGEV+ERP++VVKEL+EN+LDAGAT I + +E+GG K I I DNG Sbjct: 2 PIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGC 61 Query: 73 GIPPEQMPLALARHATSKIASLTDLENVGTLGFRGEALASIASVAQLTLTTRTADAAHAW 132 GI +++ LALARHATSKIASL DLE + +LGFRGEALASI+SV++LTLT+RTA+ AW Sbjct: 62 GIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEAW 121 Query: 133 EIIG---SQEGSVVPASGAPGTTIDVQDLYFNTPARRKFLKSEQTEYGHCAEVVRRIALA 189 + + +V PA+ GTT++V DL++NTPARRKFL++E+TE+ H E++RRIALA Sbjct: 122 QAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIALA 181 Query: 190 RPDVTFSLTHNGKTVDHW 207 R DVT +L+HNGK V + Sbjct: 182 RFDVTINLSHNGKIVRQY 199 >ECs5146 [L] COG0323 DNA mismatch repair enzyme (predicted ATPase) Ecs Escherichia coli O157:H7 Length = 615 Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 120/198 (60%), Positives = 156/198 (78%), Gaps = 3/198 (1%) Query: 13 PIQALPDQLISQIAAGEVIERPSAVVKELLENALDAGATHITVRLEQGGVKRIAITDNGR 72 PIQ LP QL +QIAAGEV+ERP++VVKEL+EN+LDAGAT I + +E+GG K I I DNG Sbjct: 2 PIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGC 61 Query: 73 GIPPEQMPLALARHATSKIASLTDLENVGTLGFRGEALASIASVAQLTLTTRTADAAHAW 132 GI +++ LALARHATSKIASL DLE + +LGFRGEALASI+SV++LTLT+RTA+ AW Sbjct: 62 GIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEAW 121 Query: 133 EIIG---SQEGSVVPASGAPGTTIDVQDLYFNTPARRKFLKSEQTEYGHCAEVVRRIALA 189 + + +V PA+ GTT++V DL++NTPARRKFL++E+TE+ H E++RRIALA Sbjct: 122 QAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIALA 181 Query: 190 RPDVTFSLTHNGKTVDHW 207 R DVT +L+HNGK V + Sbjct: 182 RFDVTINLSHNGKIVRQY 199 >mutL [L] COG0323 DNA mismatch repair enzyme (predicted ATPase) Eco Escherichia coli K12 Length = 615 Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 120/198 (60%), Positives = 155/198 (78%), Gaps = 3/198 (1%) Query: 13 PIQALPDQLISQIAAGEVIERPSAVVKELLENALDAGATHITVRLEQGGVKRIAITDNGR 72 PIQ LP QL +QIAAGEV+ERP++VVKEL+EN+LDAGAT I + +E+GG K I I DNG Sbjct: 2 PIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGC 61 Query: 73 GIPPEQMPLALARHATSKIASLTDLENVGTLGFRGEALASIASVAQLTLTTRTADAAHAW 132 GI +++ LALARHATSKIASL DLE + +LGFRGEALASI+SV++LTLT+RTA+ AW Sbjct: 62 GIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEAW 121 Query: 133 EIIG---SQEGSVVPASGAPGTTIDVQDLYFNTPARRKFLKSEQTEYGHCAEVVRRIALA 189 + +V PA+ GTT++V DL++NTPARRKFL++E+TE+ H E++RRIALA Sbjct: 122 QAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIALA 181 Query: 190 RPDVTFSLTHNGKTVDHW 207 R DVT +L+HNGK V + Sbjct: 182 RFDVTINLSHNGKIVRQY 199