BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0008.0024.p (715 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0510_3 [T] COG2200 FOG Rso Ralstonia solanacearum 241 4e-63 SMc00038_4 [T] COG2200 FOG Sme Sinorhizobium meliloti 238 4e-62 SMa1548_3 [T] COG2200 FOG Sme Sinorhizobium meliloti 231 3e-60 all4225_2 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 231 3e-60 PA0285_3 [T] COG2200 FOG Pae Pseudomonas aeruginosa 231 6e-60 >RSc0510_3 [T] COG2200 FOG Rso Ralstonia solanacearum Length = 282 Score = 241 bits (615), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 130/271 (47%), Positives = 169/271 (62%), Gaps = 3/271 (1%) Query: 365 CFVQYSNALNTRAQERLALEAQLRHAIERNELELHFQPQQGLTDDRLVGFEALVRWRRNG 424 CF + S +NT ++L L LR A+ER+EL LH+QP+ +VG EALVRW+ Sbjct: 2 CFFEAS--MNTNVHQQLQLVQDLRLALERHELVLHYQPKFSAPHGPVVGVEALVRWQHPE 59 Query: 425 E-LISPADFIPLAEESGLIVPIGDWVLAEACRQAKIWSLETPRKFVIAVNISPRQFHHPS 483 L+ P FIPLAE++GLIVP+G WVL EACRQ W E ++ IAVN+S QF H + Sbjct: 60 RGLVQPDAFIPLAEKTGLIVPLGAWVLDEACRQMAQWRREGHAQWSIAVNLSAVQFAHAA 119 Query: 484 FLRRVTTTLAESMIDPSFIELEITEGIVMRDVERTIELLEDLRKRGLTLAIDDFGTGYSS 543 + V TLA ++P + LEITE MRD + ++ +L+ L G+ ++IDDFGTGYSS Sbjct: 120 LVDTVRDTLARHALEPQGLTLEITESTAMRDADASLHILQQLHAMGVRISIDDFGTGYSS 179 Query: 544 LAYLKRFSIDKLKIDQSFIRHLRPNSEDAAIVQAVINLGHHLGLSVIAEGVETVTQRELL 603 L YLKR +LKID+ F+R L +SEDAAIV AV+ LG L L ++AEGVET Q+ L Sbjct: 180 LLYLKRLPASELKIDRGFVRDLAHDSEDAAIVSAVVALGQTLNLRIVAEGVETEAQQAFL 239 Query: 604 RAWGCDEIQGYFYGRPAVVPAVLRPAAAAGA 634 GC +QG GRP AVL A A A Sbjct: 240 TRLGCHALQGNLLGRPMTAQAVLEAAGLAQA 270 >SMc00038_4 [T] COG2200 FOG Sme Sinorhizobium meliloti Length = 257 Score = 238 bits (606), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 121/242 (50%), Positives = 161/242 (66%), Gaps = 1/242 (0%) Query: 379 ERLALEAQLRHAIERNELELHFQPQQGLTDDRLVGFEALVRWRRNGE-LISPADFIPLAE 437 E+L + +LR A+ R E LHFQPQ L R+ EAL+RW+ +ISPA FIPLAE Sbjct: 1 EKLQSQEELREALAREEFLLHFQPQMSLETGRIFAAEALLRWQHPVRGIISPAAFIPLAE 60 Query: 438 ESGLIVPIGDWVLAEACRQAKIWSLETPRKFVIAVNISPRQFHHPSFLRRVTTTLAESMI 497 E+GLIVPIGDWVL ACRQ K W +++VN+S RQF ++ RV L E+ + Sbjct: 61 ETGLIVPIGDWVLRTACRQLKAWQDAGLPPLIVSVNVSARQFRERNWAARVAAVLEETCL 120 Query: 498 DPSFIELEITEGIVMRDVERTIELLEDLRKRGLTLAIDDFGTGYSSLAYLKRFSIDKLKI 557 + ++ELE+TE ++M+DV I + L G+ LAIDDFGTGYSSL+ LKRF + +LKI Sbjct: 121 EARYLELELTESLIMQDVPGAIATMHALEAIGVHLAIDDFGTGYSSLSALKRFPVRRLKI 180 Query: 558 DQSFIRHLRPNSEDAAIVQAVINLGHHLGLSVIAEGVETVTQRELLRAWGCDEIQGYFYG 617 D+SF+ + +++D AI A+I+L LGL VIAEGVET Q E L+ GC EIQGYF+ Sbjct: 181 DRSFVTDIPHDADDMAITSAIISLAQKLGLRVIAEGVETEAQVEFLQKSGCGEIQGYFFS 240 Query: 618 RP 619 +P Sbjct: 241 QP 242 >SMa1548_3 [T] COG2200 FOG Sme Sinorhizobium meliloti Length = 253 Score = 231 bits (590), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 111/238 (46%), Positives = 162/238 (68%), Gaps = 5/238 (2%) Query: 383 LEAQLRHAIERNELELHFQPQQGLTDDRLVGFEALVRWRRNGE-LISPADFIPLAEESGL 441 ++ +R A+ + E ELH+QP L + EAL+RWR +I+P++FIP+AEE+GL Sbjct: 5 MKITMRDALAKGEFELHYQPLVSLESRCVSCCEALLRWRHPERGMIAPSEFIPIAEETGL 64 Query: 442 IVPIGDWVLAEACRQAKIWSLETPRKFVIAVNISPRQFHHPSFLRRVTTTLAESMIDPSF 501 IVPIG+W+L EACRQA W P + +AVN+SP QF H + +R V L+ + +DP+ Sbjct: 65 IVPIGEWILGEACRQAARW----PERVSVAVNLSPVQFKHRNLVRAVAKALSATRLDPAR 120 Query: 502 IELEITEGIVMRDVERTIELLEDLRKRGLTLAIDDFGTGYSSLAYLKRFSIDKLKIDQSF 561 ++LEITE +++ + E +ELL+DLR+ G+ +A+DDFGTGYSSL YL+ F DK+K+DQ+F Sbjct: 121 LQLEITETVLLDESEHNLELLQDLRRLGVKIAMDDFGTGYSSLGYLRSFPFDKIKVDQAF 180 Query: 562 IRHLRPNSEDAAIVQAVINLGHHLGLSVIAEGVETVTQRELLRAWGCDEIQGYFYGRP 619 +R L E AIV+AV LG LG++ EGVET Q ++ + G +E+QGY + RP Sbjct: 181 VRDLPHGKESLAIVKAVAGLGQSLGMTTSVEGVETEDQLAVVDSEGFNEVQGYLFSRP 238 >all4225_2 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 Length = 260 Score = 231 bits (590), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 119/259 (45%), Positives = 170/259 (65%), Gaps = 8/259 (3%) Query: 379 ERLALEAQLRHAIERNELELHFQPQQGLTDDRLVGFEALVRWRRNGE-LISPADFIPLAE 437 ERLALE +L A+ERNE+ +++QP L ++ EALVRW+ L+SPA FIP+AE Sbjct: 1 ERLALENELHGALERNEIVVYYQPIIDLQTKQITAVEALVRWQHPTRGLVSPAKFIPIAE 60 Query: 438 ESGLIVPIGDWVLAEACRQAKIWSLETPRKFVIAVNISPRQFHHPSFLRRVTTTLAESMI 497 +GLIV IG+WVL AC Q + W L ++VN+S RQF + + V+ + ES + Sbjct: 61 ANGLIVEIGEWVLRTACLQNRTWQLAGLPPIRMSVNLSARQFEESNLVELVSEIIQESGL 120 Query: 498 DPSFIELEITEGIVMRDVERTIELLEDLRKRGLTLAIDDFGTGYSSLAYLKRFSIDKLKI 557 PS++ELE+TE +M D++R++ +L+ LR+ G+ LA+DDFGTGYSSL YLKRF ++ LKI Sbjct: 121 HPSYLELEVTESSLMTDIQRSVTILKQLRELGVWLALDDFGTGYSSLNYLKRFPVNMLKI 180 Query: 558 DQSFIRHLRPNSEDAAIVQAVINLGHHLGLSVIAEGVETVTQRELLRAWGCDEIQGYFYG 617 D+SF++ + N + AA+ A+I L L L + AEG+ET Q L+ GC E QGY++G Sbjct: 181 DRSFVQDVCSNPDSAAVTNAIIALAKSLQLKITAEGIETQQQLSYLQKRGCQEGQGYYFG 240 Query: 618 RPAVVPA-----VLRPAAA 631 PA PA +L+P A Sbjct: 241 IPA--PAKEIMEILQPKEA 257 >PA0285_3 [T] COG2200 FOG Pae Pseudomonas aeruginosa Length = 274 Score = 231 bits (588), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 123/275 (44%), Positives = 167/275 (60%), Gaps = 8/275 (2%) Query: 369 YSNALNTRAQERLALEAQLRHAIERNELELHFQPQQGLTDDRLVGFEALVRWRRNGE-LI 427 Y+ L RA+ + +E+ LRHA+E +EL +H+QP L R+VG E+LVRW+ L+ Sbjct: 5 YTRVLTARARAHVQVESALRHALEHDELRVHYQPVHDLASGRIVGVESLVRWQHPERGLV 64 Query: 428 SPADFIPLAEESGLIVPIGDWVLAEACRQAKIWSLETPRKFVIAVNISPRQFHHPSFLRR 487 P +F+P+AEE GLI + +WVL ACRQ + W +AVN+S R F+ R Sbjct: 65 PPGEFVPVAEECGLIAALDNWVLKRACRQMREWQQRGVELEFVAVNVSSRLFNRGGLEER 124 Query: 488 VTTTLAESMIDPSFIELEITEGIVMRDVERTIELLEDLRKRGLTLAIDDFGTGYSSLAYL 547 + L ES ++P ++ELE+TE VM D E+++ LL LR G+ LAIDDFGTGYSSL L Sbjct: 125 IANALEESGLEPRYLELEVTESAVMEDFEQSLNLLCRLRILGVNLAIDDFGTGYSSLMRL 184 Query: 548 KRFSIDKLKIDQSFIRHLRPNSEDAAIVQAVINLGHHLGLSVIAEGVETVTQRELLRAWG 607 KR + KLKIDQ F+ L +DAAI +A++ L +GL V+AEG+E Q LR G Sbjct: 185 KRLPVHKLKIDQGFVAGLPGAVDDAAIARAIVALAQSMGLRVVAEGIEHQDQALFLREHG 244 Query: 608 CDEIQGYFYGRPAVVPAVLRPAAAAGAVVPAVLRP 642 CD QGY+YGRP +PA A +P V P Sbjct: 245 CDFGQGYWYGRP-------QPAEALRFDLPPVALP 272