BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0014.p         (170 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMb20394 [S] COG3395 Uncharacterized protein conserved in bacter...    77   1e-14
mll7005 Non COG                                                        68   9e-12

>SMb20394 [S] COG3395 Uncharacterized protein conserved in bacteria Sme
           Sinorhizobium meliloti
          Length = 442

 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 1   MDMVQLRDGAATDAQYLARLKGADTPVVMLDVLDEETLREAGRLVWEQRGA-GVFSASSS 59
           +D+VQL   A+ D    A    AD  +V+LDV DE +    GR +W  R A G F   SS
Sbjct: 180 VDLVQL---ASPDVDAFADRALADHQLVLLDVADEGSQAVVGRQLWRTRTAEGQFVCGSS 236

Query: 60  GLQYALTSYWRSRGWIAEKTSLPKAGPVPVIAAVSGSCSPVTAGQIAWARTHGFAVERLD 119
           G++YAL   WR  G I E  +    GPV  IA VSGS SP T  QI  A  +GF    LD
Sbjct: 237 GIEYALVREWRRLGLIGEAPAFAPPGPVDRIAVVSGSVSPTTERQIRHAIQNGFDGIALD 296

Query: 120 LAAVLGAD 127
             A+   D
Sbjct: 297 AVALAATD 304


>mll7005 Non COG
          Length = 438

 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 3/98 (3%)

Query: 24  DTPVVMLDVLDEETLREAGRLVWE--QRGAGVFSASSSGLQYALTSYWRSRGWIAEKTSL 81
           D  +V+ DV   +T R  G  +W   ++G G F   SSG++YAL + W  +G  A   S 
Sbjct: 196 DKEIVLFDVESHQTQRRVGEQIWRICEQGNG-FVVGSSGVEYALLAEWAGKGIAAGHASF 254

Query: 82  PKAGPVPVIAAVSGSCSPVTAGQIAWARTHGFAVERLD 119
              GPV  +A VSGS SP T  QI +A  HGF   ++D
Sbjct: 255 APPGPVDRLAVVSGSVSPTTEKQIRFALAHGFDGVQID 292