BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0169.p (283 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SA1571 [EH] COG0115 Branched-chain amino acid aminotransferase/4... 207 2e-53 BS_yheM [EH] COG0115 Branched-chain amino acid aminotransferase/... 199 8e-51 RSp0714 [EH] COG0115 Branched-chain amino acid aminotransferase/... 189 6e-48 lin1660 [EH] COG0115 Branched-chain amino acid aminotransferase/... 183 5e-46 CC1744 [EH] COG0115 Branched-chain amino acid aminotransferase/4... 174 2e-43 >SA1571 [EH] COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Sau Staphylococcus aureus N315 Length = 282 Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 108/272 (39%), Positives = 159/272 (58%), Gaps = 1/272 (0%) Query: 6 VYLNGDMTPLSEARIPVLDRGFIFGDGVYEVIPMYGRKPFRGTHHIARLFRSLGTIGITN 65 ++LNG+ SEA++ DRG++FGDG+YE I +Y K F T H R RS IG+ Sbjct: 4 IFLNGEFVSPSEAKVSYNDRGYVFGDGIYEYIRVYNGKLFTVTEHYERFLRSANEIGLDL 63 Query: 66 PHNEAEWLALIGRVVQANDLNDQIVYIQVTRGVAKRGHAFPKDPVTPTVFMMTSPLAVPS 125 ++ E + L ++V N + +YIQ TRGVA+R H+FP V P + T P Sbjct: 64 NYSVEELIELSRKLVDMNQIETGAIYIQATRGVAERNHSFPTPEVEPAIVAYTKSYDRPY 123 Query: 126 AEVRAKGVACVTLEDKRWLNCQIKSTSLLGNVLAAQYAAEHEVTEAIQFRDGFLSEASSS 185 + GV VT+ED RWL C IKS +LLGNVLA +YA ++ EAIQ R ++E SSS Sbjct: 124 DHLE-NGVNGVTVEDIRWLRCDIKSLNLLGNVLAKEYAVKYNAVEAIQHRGETVTEGSSS 182 Query: 186 NVWIVKDGKLSAPPKDNLILEGIRYGLIEELCKSQGIVFEARRITREEVFGADEVLLSSA 245 N + +KDG + P +N IL GI +I+++ + I F+ T + + ADEV++SS Sbjct: 183 NAYAIKDGVIYTHPINNYILNGITRIVIKKIAEDYNIPFKEETFTVDFLKNADEVIVSST 242 Query: 246 TKEVLPVVAIDDQRVGDGKPGPVFGKLYAAYQ 277 + EV PV+ +D + + DGK GP+ +L ++ Sbjct: 243 SAEVTPVIKLDGEPINDGKVGPITRQLQEGFE 274 >BS_yheM [EH] COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Bsu Bacillus subtilis Length = 282 Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 117/276 (42%), Positives = 162/276 (58%), Gaps = 6/276 (2%) Query: 6 VYLNGDMTPLSEARIPVLDRGFIFGDGVYEVIPMYGRKPFRGTHHIARLFRSLGTIGITN 65 V +NG + SEA I + DRG+ FGDG+YEVI +Y F H R FRS IGI+ Sbjct: 3 VLVNGRLIGRSEASIDLEDRGYQFGDGIYEVIRVYKGVLFGLREHAERFFRSAAEIGISL 62 Query: 66 PHN--EAEWLALIGRVVQANDLNDQIVYIQVTRGVAKRGHAFPKDPVTPTVFMMTSPLAV 123 P + + EW + ++VQ N +++ VYIQ TRGVA R H + + + P T + Sbjct: 63 PFSIEDLEWD--LQKLVQENAVSEGAVYIQTTRGVAPRKHQY-EAGLEPQTTAYTFTVKK 119 Query: 124 PSAEVRAKGVACVTLEDKRWLNCQIKSTSLLGNVLAAQYAAEHEVTEAIQFRDGFLSEAS 183 P E +A GVA +T ED RWL C IKS +LL NV+ Q A E EAI RDG ++E + Sbjct: 120 PEQE-QAYGVAAITDEDLRWLRCDIKSLNLLYNVMTKQRAYEAGAFEAILLRDGVVTEGT 178 Query: 184 SSNVWIVKDGKLSAPPKDNLILEGIRYGLIEELCKSQGIVFEARRITREEVFGADEVLLS 243 SSNV+ V +G + P + LIL GI I L + GI + ++ EE+ A+E+ +S Sbjct: 179 SSNVYAVINGTVRTHPANRLILNGITRMNILGLIEKNGIKLDETPVSEEELKQAEEIFIS 238 Query: 244 SATKEVLPVVAIDDQRVGDGKPGPVFGKLYAAYQAA 279 S T E++PVV +D Q +G GKPGPV +L AA+Q + Sbjct: 239 STTAEIIPVVTLDGQSIGSGKPGPVTKQLQAAFQES 274 >RSp0714 [EH] COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Rso Ralstonia solanacearum Length = 290 Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 106/273 (38%), Positives = 149/273 (54%), Gaps = 2/273 (0%) Query: 5 IVYLNGDMTPLSEARIPVLDRGFIFGDGVYEVIPMYGRKPFRGTHHIARLFRSLGTIGIT 64 IV+LNG P +EA + ++DRGF F DG+YEV + K H+ARL RSL IGI Sbjct: 4 IVFLNGQYVPAAEATVSIMDRGFTFADGIYEVTAVARGKLVDNDAHLARLTRSLSEIGID 63 Query: 65 NPHNEAEWLALIGRVVQANDLNDQIVYIQVTRGVAKRGHAFPKDPVTPTVFMMTSPLAVP 124 NP+ +AEW + ++ N L + +VY+QVTRG A+R P + PT T ++ Sbjct: 64 NPYTDAEWTRVCEALIARNGLEEGVVYMQVTRGAAERDFGIPAQ-IAPTAVAFTQVKSIV 122 Query: 125 SAEVRAKGVACVTLEDKRWLNCQIKSTSLLGNVLAAQYAAEHEVTEAIQFRDGFLSEASS 184 + + KG A VT+ D RW C IKS LL V+A Q AA +EA ++E +S Sbjct: 123 DSPLARKGAAVVTVPDLRWKRCDIKSVGLLPQVMAKQVAARAGASEAWMTDGDRVTEGAS 182 Query: 185 SNVWIV-KDGKLSAPPKDNLILEGIRYGLIEELCKSQGIVFEARRITREEVFGADEVLLS 243 S +I+ D +L P N +L GI + L + G+V E R T +E A E + Sbjct: 183 STAFIITTDKRLITRPLSNAVLPGITRVSVMALAREHGLVLEERTFTVQEAQQAAEAFFT 242 Query: 244 SATKEVLPVVAIDDQRVGDGKPGPVFGKLYAAY 276 SA+ V+PV++ID VGDG+PGP+ L Y Sbjct: 243 SASTFVMPVISIDGVPVGDGQPGPLTRALRTLY 275 >lin1660 [EH] COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Lin Listeria innocua Length = 289 Score = 183 bits (464), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 108/273 (39%), Positives = 154/273 (56%), Gaps = 3/273 (1%) Query: 6 VYLNGDMTPLSEARIPVLDRGFIFGDGVYEVIPMYGRKPFRGTHHIARLFRSLGTIGITN 65 V +N + ++A + V DRG+ FGDGVYEV+ +Y K F HI RL+ S I + Sbjct: 3 VLVNDRLVERNDATVDVEDRGYQFGDGVYEVVRLYNGKFFTYNEHIDRLYASAAKIDLVI 62 Query: 66 PHNEAEWLALIGRVVQANDLNDQIVYIQVTRGVAK-RGHAFPKDPVTPTVFMMTSPLAVP 124 P+++ AL+ ++V N++N VY+QVTRGV R H P D V + + VP Sbjct: 63 PYSKETLRALLDKLVAENNINTGNVYLQVTRGVQNPRNHVLPDDFPLEGV-LTAAAREVP 121 Query: 125 SAEVR-AKGVACVTLEDKRWLNCQIKSTSLLGNVLAAQYAAEHEVTEAIQFRDGFLSEAS 183 E + +G + +T ED RWL C IKS +LLGN+LA A + EAI R ++E S Sbjct: 122 RNERQFIEGGSAITEEDVRWLRCDIKSLNLLGNILAKNKAHQQNALEAILHRGEQVTECS 181 Query: 184 SSNVWIVKDGKLSAPPKDNLILEGIRYGLIEELCKSQGIVFEARRITREEVFGADEVLLS 243 +SNV I+KDG L DNLIL GI +I ++ K GI + T ++ ADEV +S Sbjct: 182 ASNVSIIKDGVLWTHAADNLILNGITRQVIIDVAKKNGIPVKEADFTLTDLREADEVFIS 241 Query: 244 SATKEVLPVVAIDDQRVGDGKPGPVFGKLYAAY 276 S T E+ P+ ID +V DGK GP+ +L+ + Sbjct: 242 STTIEITPITHIDGVQVADGKRGPITAQLHNYF 274 >CC1744 [EH] COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Ccr Caulobacter vibrioides Length = 287 Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 103/274 (37%), Positives = 152/274 (55%), Gaps = 5/274 (1%) Query: 7 YLNGDMTPLSEARIPVLDRGFIFGDGVYEVIPMYGRKPFRGTHHIARLFRSLGTIGITNP 66 Y+NG EA + + DRG+ DGVYEV ++ K H ARL+RSL + I +P Sbjct: 6 YVNGRFVRHGEAAVHIEDRGYQLADGVYEVWAVFDGKLADAEGHFARLWRSLDELRIAHP 65 Query: 67 HNEAEWLALIGRVVQANDLNDQIVYIQVTRGVAKRGHAFPKDPVTPTVFMMTSPLAVPSA 126 +EA ++ V+ N + + + Y+QVTRGVA+R HAFP V P+V + L ++ Sbjct: 66 MSEAALTMVLREAVRRNKVREGLCYLQVTRGVARRDHAFPNPAVLPSVVVTARSLDRAAS 125 Query: 127 EVR-AKGVACVTLEDKRWLNCQIKSTSLLGNVLAAQYAAEHEVTEAIQFRD-GFLSEASS 184 E + A+G + +++++ RW C IKS LL N LA Q A E EA D G ++E +S Sbjct: 126 EAKAAQGASVISVQENRWGRCDIKSIGLLPNALAKQAARERGAIEAWFVDDMGLVTEGAS 185 Query: 185 SNVWIVK-DGKLSAPPKDNLILEGI-RYGLIEELCKSQGIVFEARRITREEVFGADEVLL 242 SN WIV +G L + IL G+ RY L+ ++ + G+V + T E A E + Sbjct: 186 SNAWIVDAEGALRTRDTNANILRGVTRYTLL-DVIRESGMVINEKPFTIAEAQSAREAFI 244 Query: 243 SSATKEVLPVVAIDDQRVGDGKPGPVFGKLYAAY 276 + A V P+V +D ++GDGKPGPV +L A Y Sbjct: 245 TGAGSLVTPIVQVDGVKLGDGKPGPVAKRLRALY 278