BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0153.p         (213 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

STM4574 Non COG                                                        96   4e-20
gltF Non COG                                                           71   2e-12
STM4575 Non COG                                                        64   3e-10

>STM4574 Non COG
          Length = 229

 Score = 96.3 bits (238), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 113/231 (48%), Gaps = 23/231 (9%)

Query: 3   KQIALFSALAASLLVSFAAQAAETAELKVKGVIRPSACTPSFTGTNVVDYGTISGAX--- 59
           K+I L +A+AAS   + +  A  TA LKV G +    CTP  +G  VVDYGTI  A    
Sbjct: 2   KKILLITAIAASFATT-SVNADTTAVLKVTGQLVVGGCTPELSGGGVVDYGTIRLATLSA 60

Query: 60  -------EKTIAFTVTCDAATKVAVRAIDNKAST--------VVNGLMTAINSNLTDK-H 103
                   K ++ +++C +ATK A    D++A T        + NG MT  NS ++D   
Sbjct: 61  TDVNQLGTKDVSLSISCPSATKAAWTITDDRADTHPGASVISIANGDMT--NSIVSDTTM 118

Query: 104 AYGLG-AAGGKNIGAYSVRTIVGSFTADGATPDVVADAANNNTWTKSTYGRFHADGSARQ 162
           +YG+G    G  IGA+S+ T   + TADG   D ++   ++  W KS+ G          
Sbjct: 119 SYGVGKTTEGVKIGAFSIYTDTANVTADGVKSDAISGTVDSPVWQKSSTGIIKNGNMEMF 178

Query: 163 SFAATGSTVPGSYKTISGNLGVTAVLDKGDNLPLTQNIDLDGSATIEVQYL 213
           + A  G+T P  Y      L  +  +     L +T + DLDG ATI ++YL
Sbjct: 179 TVATKGTTEPVPYTLAIFPLKTSLAIQNTATLAITDDTDLDGQATITLKYL 229


>gltF Non COG
          Length = 254

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 113/245 (46%), Gaps = 38/245 (15%)

Query: 6   ALFSALAASLLVSFAAQAAETAELKVKGVIRPSACTPSFTGTNVVDYG-------TISGA 58
           A+ +AL+ +   + A  + +T EL + G   P ACTP  TG  +VDYG         +G 
Sbjct: 11  AICAALSVAAFSAMATDSTDT-ELTIIGEYTPGACTPVVTGGGIVDYGKHHNSALNPTGK 69

Query: 59  XEKTI-------AFTVTCDAATKVAVRAIDNKASTVV----NGLMTAINSNLTD----KH 103
             K +          +TC A T +AV + DN+ ST+V       +      L D    K+
Sbjct: 70  SNKLVQLGRKNSTLNITCTAPTLIAVTSKDNRQSTIVALNDTSYIEKAYDTLVDMKGTKN 129

Query: 104 AYGLGAA-GGKNIGAYSV---RTIVGSFTAD--GATP-DVVAD---AANNNTWTKSTYGR 153
           A+GLG+A  G+ IGA S+   R+  G   AD  G  P D++     +A   TW  S+ G 
Sbjct: 130 AFGLGSAPNGQKIGAASIGIDRSNGGIHAADDTGEIPVDLIQTDHWSAATPTWKASSNGA 189

Query: 154 FHADGSAR-----QSFAATGSTVPGSYKTISGNLGVTAVLDKGDNLPLTQNIDLDGSATI 208
           F +  S        S A TG   P +   ++  L + A ++    L   + I LDG+ TI
Sbjct: 190 FCSLTSCSAIERGYSVAKTGELTPVAITAVTFPLLIDAAVNDNTILGSDETIKLDGNVTI 249

Query: 209 EVQYL 213
            VQYL
Sbjct: 250 SVQYL 254


>STM4575 Non COG
          Length = 229

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 100/227 (44%), Gaps = 21/227 (9%)

Query: 7   LFSALAASLLVSFAAQAAE-TAELKVKGVIRPSACTPSFTGTNVVDYGT----------I 55
           L  A +  + +S +AQA E TA LK+ GV+   AC P  +   VVD+GT           
Sbjct: 4   LLIATSVIIGLSTSAQAVESTAVLKLTGVLTNGACIPELSDGGVVDFGTKAVSDLLPTQT 63

Query: 56  SGAXEKTIAFTVTCDAATKVAVRAIDNKAS-----TVVNGLMTAINSNLTDKHAYGLG-A 109
           +    K I  T+ C A  KV   A DN        T+ N      N+ + + +  GLG  
Sbjct: 64  NQLGYKDITLTIQCLAPAKVGWVATDNHGDSATTLTIDNATFGGQNNRIPN-YQLGLGTT 122

Query: 110 AGGKNIGAYSVRTIVGSFTADGATPDVVA-DAANNNTWTKST--YGRFHADGSARQSFAA 166
           A G  IGAY +     + TADG    +VA + +N   W  ++  Y         R +++ 
Sbjct: 123 ADGIKIGAYGLSIDANNSTADGVKTKMVASNDSNPGVWALASNEYVALTNTFPTRTTYSV 182

Query: 167 TGSTVPGSYKTISGNLGVTAVLDKGDNLPLTQNIDLDGSATIEVQYL 213
                P ++ T +  + V A +   D L +T N  LDG AT  + YL
Sbjct: 183 GDGNGPVAFTTATFPIRVAAAIQGTDTLAITDNTTLDGQATFTLVYL 229