BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0140.p (212 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value VC2440 [S] COG3025 Uncharacterized conserved protein Vch Vibrio ... 130 2e-30 PM0251 [S] COG3025 Uncharacterized conserved protein Pmu Pasteur... 108 9e-24 STM3202 [S] COG3025 Uncharacterized conserved protein Sty Salmon... 102 9e-22 ygiF [S] COG3025 Uncharacterized conserved protein Eco Escherich... 101 1e-21 ZygiF [S] COG3025 Uncharacterized conserved protein EcZ Escheric... 100 2e-21 >VC2440 [S] COG3025 Uncharacterized conserved protein Vch Vibrio cholerae Length = 505 Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 80/202 (39%), Positives = 115/202 (56%), Gaps = 6/202 (2%) Query: 2 EIELKLLIAAEDVVAFCALPLLQQHAVGAATSQDLFSTYFDTPTLHLKQHRSALRVRKAG 61 EIELK ++ + A + + V + ++L +TYFDTP L+QH LR+R+ Sbjct: 4 EIELKFFVSPDFSTILRAK--ISETKVLQHSCRELGNTYFDTPDNWLRQHDIGLRIRRFD 61 Query: 62 ALWIQTYKGGGSVAAGLHQRHEWECEVAGPRIELDKLLPLVDNPAARAALELPGLAAQLE 121 +++QT K G V AGLHQR E+ E +L L P P + EL L A+L Sbjct: 62 EVYVQTVKTAGRVVAGLHQRPEFNAEHHSNEPDL-SLHPADIWPQGK---ELTQLQAELM 117 Query: 122 AVFATSFRRTAWQLRLPQGTEVELALDQGVVEADGRTLPICEIELELKSGQTDELLAFSQ 181 +F+T+F R W + + G++VE+A DQG+V A R PICE+ELELKSGQTD L ++ Sbjct: 118 PLFSTNFTREQWLISMADGSQVEVAFDQGLVVAGDRQEPICEVELELKSGQTDALFTLAR 177 Query: 182 ALRQAIALAPSNVSKAQRGFAL 203 L + + N+SKA RG+ L Sbjct: 178 QLCEHGGMRLGNLSKAARGYRL 199 >PM0251 [S] COG3025 Uncharacterized conserved protein Pmu Pasteurella multocida Length = 356 Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 77/208 (37%), Positives = 107/208 (51%), Gaps = 14/208 (6%) Query: 2 EIELKLLIAAEDVVAFCALPLLQQHAVGAATSQDLFSTYFDTPTLHLKQHRSALRVRKAG 61 E+ELKL + + A L + A + L +TY+DT L +H+ LRVR+ Sbjct: 4 EVELKLAVTPK--FADLLHQELTNFRILAHNTIFLANTYYDTADRVLAKHKMGLRVRQEN 61 Query: 62 ALWIQTYKGGGSVAAGLHQRHEWECEV--AGPRIELDKLLPLVDNPAARAALELPGLAA- 118 + T K G V GLH R E+ + A P I L LV+ + AL LP A Sbjct: 62 QQYTLTLKTDGEVHGGLHIRPEYNVTLPDAQPNISL-----LVE----KYALTLPNYAQW 112 Query: 119 QLEAVFATSFRRTAWQLRLPQGTEVELALDQGVVEADGRTLPICEIELELKSGQTDELLA 178 +L+ VF+T F R +W + GT +E+A DQG + A + PICE+E ELKSG +LL Sbjct: 113 ELKPVFSTDFERESWLIECGNGTHIEVAFDQGKIVAGEKQTPICEVEFELKSGLPIDLLR 172 Query: 179 FSQALRQAIALAPSNVSKAQRGFALRFP 206 F Q L + S+ SKA+RG+ L P Sbjct: 173 FVQTLTLENEIRLSSASKAKRGYLLANP 200 >STM3202 [S] COG3025 Uncharacterized conserved protein Sty Salmonella typhimurium LT2 Length = 433 Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 108/209 (51%), Gaps = 21/209 (10%) Query: 2 EIELKLLIAAEDVVAFCALPLLQQHAVGA---ATSQDLFSTYFDTPTLHLKQHRSALRVR 58 EIELK ++ + V A H +G A SQ L + YF+TP L++H LR+R Sbjct: 4 EIELKFIVNHDAVDALRN----HLHTLGGEHHAPSQ-LLNIYFETPDNWLRRHDMGLRIR 58 Query: 59 KAGALWIQTYKGGGSVAAGLHQRHEWECEVAGPRIELDKL----LPLVDNPAARAALELP 114 + T K G V GLHQR E+ ++ P ++L +L P + PA Sbjct: 59 GENGRYEMTMKIAGRVTGGLHQRPEYNVALSEPVLDLTQLPAEVWPDGNLPA-------- 110 Query: 115 GLAAQLEAVFATSFRRTAWQLRLPQGTEVELALDQGVVEADGRTLPICEIELELKSGQTD 174 GLA+ ++ +F+T F R W L + G+ +E+ALD G V+A PICE+ELEL G T Sbjct: 111 GLASSVQPLFSTDFYREKWCLDV-DGSRIEIALDLGDVKAGEFAEPICELELELLRGDTR 169 Query: 175 ELLAFSQALRQAIALAPSNVSKAQRGFAL 203 +L ++ L L ++SKA RG+ L Sbjct: 170 AVLKLAKQLLSQTGLRQGSLSKAARGYHL 198 >ygiF [S] COG3025 Uncharacterized conserved protein Eco Escherichia coli K12 Length = 433 Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 108/207 (52%), Gaps = 17/207 (8%) Query: 2 EIELKLLIAAEDVVAFCALPLLQQH--AVGAATSQ--DLFSTYFDTPTLHLKQHRSALRV 57 EIELK +V A+ L+ H +G L + Y++TP L+ H LR+ Sbjct: 4 EIELKF------IVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETPDNWLRGHDMGLRI 57 Query: 58 RKAGALWIQTYKGGGSVAAGLHQRHEWECEVAGPRIELDKLLPLVDNPAARAALELPG-L 116 R + T K G V GLHQR E+ ++ P ++L +L P P ELP L Sbjct: 58 RGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQL-PTEVWPNG----ELPADL 112 Query: 117 AAQLEAVFATSFRRTAWQLRLPQGTEVELALDQGVVEADGRTLPICEIELELKSGQTDEL 176 A++++ +F+T F R W + + G+++E+ALDQG V+A PICE+ELEL SG T + Sbjct: 113 ASRVQPLFSTDFYREKWLVAV-DGSQIEIALDQGEVKAGEFAEPICELELELLSGDTRAV 171 Query: 177 LAFSQALRQAIALAPSNVSKAQRGFAL 203 L + L L ++SKA RG+ L Sbjct: 172 LKLANQLVSQTGLRQGSLSKAARGYHL 198 >ZygiF [S] COG3025 Uncharacterized conserved protein EcZ Escherichia coli O157:H7 EDL933 Length = 433 Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 107/207 (51%), Gaps = 17/207 (8%) Query: 2 EIELKLLIAAEDVVAFCALPLLQQH--AVGAATSQ--DLFSTYFDTPTLHLKQHRSALRV 57 EIELK +V A+ L+ H +G L + Y++TP L+ H LR+ Sbjct: 4 EIELKF------IVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETPDNWLRGHDMGLRI 57 Query: 58 RKAGALWIQTYKGGGSVAAGLHQRHEWECEVAGPRIELDKLLPLVDNPAARAALELPG-L 116 R + T K G V GLHQR E+ ++ P ++L +L P P ELP L Sbjct: 58 RGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQL-PTEVWPNG----ELPADL 112 Query: 117 AAQLEAVFATSFRRTAWQLRLPQGTEVELALDQGVVEADGRTLPICEIELELKSGQTDEL 176 A++++ +F+T F R W + + G+ +E+ALDQG V+A PICE+ELEL SG T + Sbjct: 113 ASRVQPLFSTDFYREKWLVAV-DGSRIEIALDQGEVKAGEFAEPICELELELLSGDTRAV 171 Query: 177 LAFSQALRQAIALAPSNVSKAQRGFAL 203 L + L L ++SKA RG+ L Sbjct: 172 LKLANQLVSQTGLRQGSLSKAARGYHL 198