BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0106.p (768 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1280 [C] COG0348 Polyferredoxin Rso Ralstonia solanacearum 444 e-124 PA1551 [C] COG0348 Polyferredoxin Pae Pseudomonas aeruginosa 391 e-108 NMA1668 [C] COG0348 Polyferredoxin NmA Neisseria meningitidis Z2491 373 e-103 PA4131 [C] COG0348 Polyferredoxin Pae Pseudomonas aeruginosa 371 e-102 NMB1454 [C] COG0348 Polyferredoxin Nme Neisseria meningitidis MC58 370 e-102 >RSc1280 [C] COG0348 Polyferredoxin Rso Ralstonia solanacearum Length = 477 Score = 444 bits (1141), Expect = e-124, Method: Compositional matrix adjust. Identities = 221/355 (62%), Positives = 272/355 (76%), Gaps = 5/355 (1%) Query: 349 NIFAREIKGRYASLRWVCLWLTQLVFYGLPWLQWNGRQAVLFDLGARKFYIFGIVLWPQD 408 I+ R + G +A R + TQ VFYGLPWLQW+GRQAVLFDLGARKFY+FG+VLWPQD Sbjct: 25 KIYPRAVTGAFARWRVWLVLATQAVFYGLPWLQWHGRQAVLFDLGARKFYLFGLVLWPQD 84 Query: 409 FIYLAALLIICAYALFLFTAVAGRVWCGFSCPQTVYTEMFLWIERRIEGTRSARMRLDRQ 468 IYL LL++ A +LFLFTAVAGR++CG++CPQTVYTE+F+WIER IEG R AR+RLD + Sbjct: 85 VIYLTVLLVLSALSLFLFTAVAGRLFCGYACPQTVYTEIFMWIERHIEGDRFARIRLDGE 144 Query: 469 PWGVQKLLKKSAKHIVWGALSLWTGFSFVGYFTPIHELMASVAVVSPGPWEAFWITFYSF 528 W V+KL K+AKH W ++LWTGF+FVG+FTPI EL V +S GPW+ FW+ FY+F Sbjct: 145 RWSVRKLRLKTAKHSAWILIALWTGFTFVGFFTPIRELGMEVWTLSLGPWQTFWMLFYAF 204 Query: 529 ATYGNAGWMREQVCKYMCPYARFQSAMIDKDTLIITYDRARGEPRGAKSK----AAQKTG 584 AT+GNAG+MREQVC+YMCPYARFQS M+D+DT ++TYD RGEPRG++S+ AA+ G Sbjct: 205 ATWGNAGFMREQVCRYMCPYARFQSVMVDRDTYVVTYDTQRGEPRGSRSRNEDFAARGLG 264 Query: 585 DCIDCSMCVQVCPTGIDIRDGLQYECIGCAACIDACNGVMAKVALPPGLIRYSTEHAITS 644 C+DCS+CVQVCPTGIDIR GLQYECIGC ACIDAC+ VM K+ P GLIRY++E A+ Sbjct: 265 ACVDCSICVQVCPTGIDIRQGLQYECIGCGACIDACDQVMDKMRYPRGLIRYTSERAMRD 324 Query: 645 HLSLQEMRRRVLRPRVLAYTALLVLIVAGFGTALALRTPLXGRDGARSRGRHDRE 699 L E RR +LRPRVL Y+ +L+ + AG ALALR PL D R RG RE Sbjct: 325 RLPPGEARRHLLRPRVLIYSGVLLTLAAGLIVALALRAPLK-VDVIRDRGALARE 378 >PA1551 [C] COG0348 Polyferredoxin Pae Pseudomonas aeruginosa Length = 471 Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust. Identities = 187/357 (52%), Positives = 243/357 (68%), Gaps = 11/357 (3%) Query: 349 NIFAREIKGRYASLRWVCLWLTQLVFYGLPWLQWNGRQAVLFDLGARKFYIFGIVLWPQD 408 I+ R G + LR V L+++G WL W+GRQAV +DL RKFYIFG WPQD Sbjct: 29 KIYTRAFTGIFRRLRMVGGAALFLLYFGTVWLNWSGRQAVWWDLPERKFYIFGATFWPQD 88 Query: 409 FIYLAALLIICAYALFLFTAVAGRVWCGFSCPQTVYTEMFLWIERRIEGTRSARMRLDRQ 468 F+ L+ LLI+CA+ LF T AGRVWCG++CPQ+V+T +++W E+ EG R+ R++LD+ Sbjct: 89 FMLLSWLLIVCAFGLFFITVFAGRVWCGYTCPQSVWTWIYMWCEKVTEGDRNQRIKLDKA 148 Query: 469 PWGVQKLLKKSAKHIVWGALSLWTGFSFVGYFTPIHELMASVAVVSPGPWEAFWITFYSF 528 P KLL+K+AKH +W + L TG +FVGYF+PI EL+ + W FW+ F++ Sbjct: 149 PMSGNKLLRKTAKHSLWLLIGLVTGLTFVGYFSPIRELIPELLTGQADGWAYFWVGFFTL 208 Query: 529 ATYGNAGWMREQVCKYMCPYARFQSAMIDKDTLIITYDRARGEPRGAKSKA----AQKTG 584 ATYGNAGW+REQVC YMCPYARFQS M DKDTLI++YD RGE RG + K+ AQ G Sbjct: 209 ATYGNAGWLREQVCIYMCPYARFQSVMFDKDTLIVSYDPRRGEKRGPRKKSLDYKAQGLG 268 Query: 585 DCIDCSMCVQVCPTGIDIRDGLQYECIGCAACIDACNGVMAKVALPPGLIRYSTEHAITS 644 DCIDC+MCVQVCPTGIDIRDGLQ ECIGCAACIDAC+ +M K+ P GLI Y+TEH Sbjct: 269 DCIDCTMCVQVCPTGIDIRDGLQIECIGCAACIDACDSIMEKMNYPKGLISYTTEH---- 324 Query: 645 HLSLQEMRRRVLRPRVLAYTALLVLIVAGFGTALALRTPLXGRDGARSRGRHDRERL 701 +L + + RPR++ Y LVL+++ TA+ LR PL G D ++ R + L Sbjct: 325 --NLNGQKTHLARPRLIGYAIALVLMISALITAVVLR-PLVGFDVSKDRVLYRENEL 378 >NMA1668 [C] COG0348 Polyferredoxin NmA Neisseria meningitidis Z2491 Length = 498 Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust. Identities = 177/355 (49%), Positives = 242/355 (68%), Gaps = 5/355 (1%) Query: 350 IFAREIKGRYASLRWVCLWLTQLVFYGLPWLQWNGRQAVLFDLGARKFYIFGIVLWPQDF 409 I ++ +GR+A LR + TQ VFY +PW W+GRQAV+F++ R F+IFG+ L D Sbjct: 46 IHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGVGDL 105 Query: 410 IYLAALLIICAYALFLFTAVAGRVWCGFSCPQTVYTEMFLWIERRIEGTRSARMRLDRQP 469 IYLA LL+ICA+ LF +T +AGR+WCG+SCPQTVYTE+ LWI+ +EG R+ R++L++ P Sbjct: 106 IYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLKLEKSP 165 Query: 470 WGVQKLLKKSAKHIVWGALSLWTGFSFVGYFTPIHELMASVAVVSPGPWEAFWITFYSFA 529 W K+ K+ K+++ + WTG +F G+F PI + + + + G F FY F Sbjct: 166 WNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFATAFYGFM 225 Query: 530 TYGNAGWMREQVCKYMCPYARFQSAMIDKDTLIITYDRARGEPRGAKSKAAQKT----GD 585 T+ A MRE+VC +MCPYARFQSAM DKDTLI++YD RGEPRGA+ K K GD Sbjct: 226 TFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTVNKEEAGLGD 285 Query: 586 CIDCSMCVQVCPTGIDIRDGLQYECIGCAACIDACNGVMAKVALPPGLIRYSTEHAITSH 645 CI+C+MCVQVCP GIDIR+GLQY+CIGCAACIDAC+ +M K+ P GLIRY+TE A+ Sbjct: 286 CINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDACDEIMDKMGYPRGLIRYTTESALEHE 345 Query: 646 LSLQEMRRRVLRPRVLAYTALLVLIVAGFGTALALRTPLXGRDGARSRGRHDRER 700 S +++++R+LRPRV Y A+L L++ F L+ R + D + RG RE Sbjct: 346 YSEKDIKKRLLRPRVAGYGAVLALVIIAFLAGLSTRK-MVEVDILKDRGVLVREN 399 >PA4131 [C] COG0348 Polyferredoxin Pae Pseudomonas aeruginosa Length = 573 Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust. Identities = 177/320 (55%), Positives = 225/320 (70%), Gaps = 11/320 (3%) Query: 379 WLQWNGRQAVLFDLGARKFYIFGIVLWPQDFIYLAALLIICAYALFLFTAVAGRVWCGFS 438 WL WNGRQAVL+DL RKFYIFG WPQDFI L+ALLII A+ LF T AGRVWCG++ Sbjct: 162 WLNWNGRQAVLWDLPERKFYIFGATFWPQDFILLSALLIIAAFGLFFITVFAGRVWCGYT 221 Query: 439 CPQTVYTEMFLWIERRIEGTRSARMRLDRQPWGVQKLLKKSAKHIVWGALSLWTGFSFVG 498 CPQ+V+T +F+W E+ EG R+AR++LD+ P KLL+K+AKH +W +SL T +F+G Sbjct: 222 CPQSVWTWVFMWCEKVTEGDRNARIKLDQGPASAAKLLRKTAKHALWLGVSLVTAITFIG 281 Query: 499 YFTPIHELMASVAVVSPGPWEAFWITFYSFATYGNAGWMREQVCKYMCPYARFQSAMIDK 558 YFTP+ L+A + FW+ F++ ATY NAGW+REQVC +MCPY+RFQS M DK Sbjct: 282 YFTPVRPLVADLFSFQLDLESLFWVLFFTAATYVNAGWLREQVCIHMCPYSRFQSVMFDK 341 Query: 559 DTLIITYDRARGEPRGAKSKA----AQKTGDCIDCSMCVQVCPTGIDIRDGLQYECIGCA 614 DTLI++YD ARGE RGA+ K AQ GDCIDC CVQVCPTGIDIRDGLQ CIGCA Sbjct: 342 DTLIVSYDAARGESRGARKKGSDPRAQGLGDCIDCQQCVQVCPTGIDIRDGLQIACIGCA 401 Query: 615 ACIDACNGVMAKVALPPGLIRYSTEHAITSHLSLQEMRRRVLRPRVLAYTALLVLIVAGF 674 AC+DAC+ +M K+ GL+RY++E A L+ + R LRPR++ Y A+++ ++ F Sbjct: 402 ACVDACDSIMDKMGYERGLVRYTSERA------LEGGQTRFLRPRLVGYAAVMLAMIGAF 455 Query: 675 GTALALRTPLXGRDGARSRG 694 AL R PL D R RG Sbjct: 456 VVALDAR-PLASLDVTRDRG 474 >NMB1454 [C] COG0348 Polyferredoxin Nme Neisseria meningitidis MC58 Length = 498 Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust. Identities = 177/355 (49%), Positives = 242/355 (68%), Gaps = 5/355 (1%) Query: 350 IFAREIKGRYASLRWVCLWLTQLVFYGLPWLQWNGRQAVLFDLGARKFYIFGIVLWPQDF 409 I ++ +GR+A LR + TQ VFY +PW W+GRQAV+F++ R F+IFG+ L D Sbjct: 46 IHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGVGDL 105 Query: 410 IYLAALLIICAYALFLFTAVAGRVWCGFSCPQTVYTEMFLWIERRIEGTRSARMRLDRQP 469 IYLA LL+ICA+ LF +T +AGR+WCG+SCPQTVYTE+ LWI+ +EG R+ R++L++ P Sbjct: 106 IYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLKLEKSP 165 Query: 470 WGVQKLLKKSAKHIVWGALSLWTGFSFVGYFTPIHELMASVAVVSPGPWEAFWITFYSFA 529 W K+ K+ K+++ + WTG +F G+F PI + + + + G F FY F Sbjct: 166 WNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFAAAFYGFM 225 Query: 530 TYGNAGWMREQVCKYMCPYARFQSAMIDKDTLIITYDRARGEPRGAKSKAAQKT----GD 585 T+ A MRE+VC +MCPYARFQSAM DKDTLI++YD RGEPRGA+ K K GD Sbjct: 226 TFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTVNKEEAGLGD 285 Query: 586 CIDCSMCVQVCPTGIDIRDGLQYECIGCAACIDACNGVMAKVALPPGLIRYSTEHAITSH 645 CI+C+MCVQVCP GIDIR+GLQY+CIGCAACIDAC+ +M K+ P GLIRY+TE A+ Sbjct: 286 CINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDACDEIMDKMGYPRGLIRYTTESALEHE 345 Query: 646 LSLQEMRRRVLRPRVLAYTALLVLIVAGFGTALALRTPLXGRDGARSRGRHDRER 700 S +++++R+LRPRV Y A+L L++ F L+ R + D + RG RE Sbjct: 346 YSEKDIKKRLLRPRVAGYGAVLALVIIAFLAGLSTRK-MVEVDILKDRGVLVREN 399