BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0094.p         (120 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGl2580 [G] COG2376 Dihydroxyacetone kinase Atu Agrobacterium tu...    67   1e-11
ycgT [G] COG2376 Dihydroxyacetone kinase Eco Escherichia coli K12      58   5e-09
Z1971 [G] COG2376 Dihydroxyacetone kinase EcZ Escherichia coli O...    58   5e-09
ECs1705 [G] COG2376 Dihydroxyacetone kinase Ecs Escherichia coli...    58   5e-09

>AGl2580 [G] COG2376 Dihydroxyacetone kinase Atu Agrobacterium tumefaciens
          strain C58 (Cereon)
          Length = 564

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 1/60 (1%)

Query: 1  MKKLINDVSQVVPDMLNGLVALNPHLALLQGKTIVVRADAAQAAGRGEVALISGGGAGHE 60
          MKKLIND S VV DML G+VAL+P   LLQ + +V+R+   +A  R +VA++SGGG+GHE
Sbjct: 1  MKKLINDPSTVVRDMLEGIVALSPETILLQDENVVIRSGLPEAEKR-KVAVLSGGGSGHE 59


>ycgT [G] COG2376 Dihydroxyacetone kinase Eco Escherichia coli K12
          Length = 366

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)

Query: 1  MKKLINDVSQVVPDMLNGLVALNPHLALLQGKTIVVRADAAQAAGRGEVALISGGGAGHE 60
          MKKLINDV  V+ + L GL   +P L L Q    V RADA  A   G+VAL+SGGG+GHE
Sbjct: 11 MKKLINDVQDVLDEQLAGLAKAHPSLTLHQDPVYVTRADAPVA---GKVALLSGGGSGHE 67


>Z1971 [G] COG2376 Dihydroxyacetone kinase EcZ Escherichia coli O157:H7
          EDL933
          Length = 366

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)

Query: 1  MKKLINDVSQVVPDMLNGLVALNPHLALLQGKTIVVRADAAQAAGRGEVALISGGGAGHE 60
          MKKLINDV  V+ + L GL   +P L L Q    V RADA  A   G+VAL+SGGG+GHE
Sbjct: 11 MKKLINDVQDVLDEQLAGLAKAHPSLTLHQDPVYVTRADAPVA---GKVALLSGGGSGHE 67


>ECs1705 [G] COG2376 Dihydroxyacetone kinase Ecs Escherichia coli O157:H7
          Length = 366

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)

Query: 1  MKKLINDVSQVVPDMLNGLVALNPHLALLQGKTIVVRADAAQAAGRGEVALISGGGAGHE 60
          MKKLINDV  V+ + L GL   +P L L Q    V RADA  A   G+VAL+SGGG+GHE
Sbjct: 11 MKKLINDVQDVLDEQLAGLAKAHPSLTLHQDPVYVTRADAPVA---GKVALLSGGGSGHE 67