BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0046.p (213 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr6925 [L] COG2818 3-methyladenine DNA glycosylase Mlo Mesorhiz... 303 1e-82 BMEII1058 [L] COG2818 3-methyladenine DNA glycosylase Bme Brucel... 288 8e-78 SMc00923 [L] COG2818 3-methyladenine DNA glycosylase Sme Sinorhi... 277 1e-74 AGc1200 [L] COG2818 3-methyladenine DNA glycosylase Atu Agrobact... 262 3e-70 Cgl2777 [L] COG2818 3-methyladenine DNA glycosylase Cgl Coryneba... 180 2e-45 >mlr6925 [L] COG2818 3-methyladenine DNA glycosylase Mlo Mesorhizobium loti Length = 212 Score = 303 bits (777), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 142/210 (67%), Positives = 169/210 (80%), Gaps = 3/210 (1%) Query: 6 SNEVPGLITAEDGKDYCAWHAAMPEY---HGSEWGRPVADDVRLFEKICLEGFQSGLAWI 62 SNE GL+ DG C WH +P+Y H EWGRPVADD RLFEKICLEGFQSGL+W+ Sbjct: 2 SNENTGLLAGPDGVARCFWHGNLPDYLHYHDHEWGRPVADDRRLFEKICLEGFQSGLSWL 61 Query: 63 TILRKRENFRAAFDGFDFHRVARYTEPDIGRLLGDAGIIRNRAKIVSAINNARRAIELVE 122 TILRKRENFR AF GFDF ++A +T+ D+ RLLG+AGIIR+R KIVS INNA+RA E+V+ Sbjct: 62 TILRKRENFREAFAGFDFDKIAAFTDKDVERLLGNAGIIRHRGKIVSTINNAKRAREMVD 121 Query: 123 EAGSLAAWFWQFEPAAKDRPKVLTLDYWQANPTSEASVALSKALKKRGWTFVGPTTIYAF 182 E GSLAAWFW+FEP +RP+++ L + +ANPT+ SV +SK LKKRGW+FVGPTT+YAF Sbjct: 122 EFGSLAAWFWKFEPGKAERPEIVDLAHLRANPTTAVSVRISKELKKRGWSFVGPTTVYAF 181 Query: 183 MQAMGLVNDHLTGCACRKTVEAERKAFRRP 212 MQAMGLVNDHL GC CRK VE ERKAF+RP Sbjct: 182 MQAMGLVNDHLEGCVCRKQVEKERKAFKRP 211 >BMEII1058 [L] COG2818 3-methyladenine DNA glycosylase Bme Brucella melitensis Length = 226 Score = 288 bits (736), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 134/206 (65%), Positives = 159/206 (77%), Gaps = 3/206 (1%) Query: 11 GLITAEDGKDYCAWHAAMPEY---HGSEWGRPVADDVRLFEKICLEGFQSGLAWITILRK 67 GL+ DG+ C +P+Y H +EWG PVADD RLFEKICLEGFQSGL+W+TILRK Sbjct: 18 GLVVGADGRTRCFCPGELPDYLAYHDNEWGVPVADDFRLFEKICLEGFQSGLSWLTILRK 77 Query: 68 RENFRAAFDGFDFHRVARYTEPDIGRLLGDAGIIRNRAKIVSAINNARRAIELVEEAGSL 127 RENFRAAFDGF+FHR+A Y E D+ RLL D GI+R+R KIVS INNA RAIEL+EE GSL Sbjct: 78 RENFRAAFDGFNFHRIATYDESDVERLLADKGIVRHRGKIVSVINNAGRAIELIEEKGSL 137 Query: 128 AAWFWQFEPAAKDRPKVLTLDYWQANPTSEASVALSKALKKRGWTFVGPTTIYAFMQAMG 187 AA+FW FEP A++RP V+ ANP + S +SK LKKRGW+FVGPTT+YAFMQAMG Sbjct: 138 AAYFWSFEPGAENRPAVVDYPTLVANPITATSTRISKDLKKRGWSFVGPTTVYAFMQAMG 197 Query: 188 LVNDHLTGCACRKTVEAERKAFRRPG 213 LVNDH+ GC CR T+E R+ F+RPG Sbjct: 198 LVNDHIEGCHCRATIEKLRQNFKRPG 223 >SMc00923 [L] COG2818 3-methyladenine DNA glycosylase Sme Sinorhizobium meliloti Length = 211 Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 133/205 (64%), Positives = 157/205 (76%), Gaps = 3/205 (1%) Query: 11 GLITAEDGKDYCAWHAAMPEY---HGSEWGRPVADDVRLFEKICLEGFQSGLAWITILRK 67 GLIT +DG D CAWH + +Y H EWGRPVADD RLFEKICLEGFQSGL+W+TILRK Sbjct: 5 GLITGDDGLDRCAWHGNLEDYRRYHDEEWGRPVADDHRLFEKICLEGFQSGLSWLTILRK 64 Query: 68 RENFRAAFDGFDFHRVARYTEPDIGRLLGDAGIIRNRAKIVSAINNARRAIELVEEAGSL 127 R+ FRAAF GFDF +VA + E D+ R L DAGI+R+R KIVS INNARRA EL E GSL Sbjct: 65 RDAFRAAFAGFDFDKVAEFGEEDVERCLADAGIVRHRGKIVSTINNARRAKELRAEFGSL 124 Query: 128 AAWFWQFEPAAKDRPKVLTLDYWQANPTSEASVALSKALKKRGWTFVGPTTIYAFMQAMG 187 A++FW EP +RP+++ + ANPT+ ASV +SK LKKRGWTFVGPTT+YAFMQAMG Sbjct: 125 ASYFWSHEPDGSERPQIVDFETLIANPTTPASVRISKDLKKRGWTFVGPTTVYAFMQAMG 184 Query: 188 LVNDHLTGCACRKTVEAERKAFRRP 212 LVNDH+ GC CR +E R+ F RP Sbjct: 185 LVNDHIEGCFCRAPIEDLRRRFARP 209 >AGc1200 [L] COG2818 3-methyladenine DNA glycosylase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 230 Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 127/205 (61%), Positives = 151/205 (73%), Gaps = 3/205 (1%) Query: 11 GLITAEDGKDYCAWHAAMPEY---HGSEWGRPVADDVRLFEKICLEGFQSGLAWITILRK 67 GL T DG+ C W + +Y H EWG PV DD RLFEKICLEGFQSGL+W+T+LRK Sbjct: 26 GLETGADGRVRCFWQQGLDDYSRYHDEEWGYPVTDDRRLFEKICLEGFQSGLSWLTVLRK 85 Query: 68 RENFRAAFDGFDFHRVARYTEPDIGRLLGDAGIIRNRAKIVSAINNARRAIELVEEAGSL 127 RE FR AF F+F +VA + + DI R L D GIIR+R KIVS INNARRA+ L +E GSL Sbjct: 86 REAFRLAFANFEFEKVAEFGDADIERCLADKGIIRHRGKIVSTINNARRAMALRDEFGSL 145 Query: 128 AAWFWQFEPAAKDRPKVLTLDYWQANPTSEASVALSKALKKRGWTFVGPTTIYAFMQAMG 187 A +FW FEPAA +RP+ L +ANPTS AS+ LSK LKKRGWTFVGPTT+YAFMQAMG Sbjct: 146 ARYFWGFEPAAAERPQRLDYATLRANPTSAASIRLSKDLKKRGWTFVGPTTVYAFMQAMG 205 Query: 188 LVNDHLTGCACRKTVEAERKAFRRP 212 +VNDH+ GC CR+ +E R+ F RP Sbjct: 206 MVNDHIEGCHCRQPIEVMRREFVRP 230 >Cgl2777 [L] COG2818 3-methyladenine DNA glycosylase Cgl Corynebacterium glutamicum Length = 196 Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 94/192 (48%), Positives = 129/192 (67%), Gaps = 10/192 (5%) Query: 12 LITAEDGKDYCAWHAAMP---EYHGSEWGRPVADDVRLFEKICLEGFQSGLAWITILRKR 68 LI DG +W A P +Y+ +EWG P+ D+ LFE++ LE FQSGL+W TILRKR Sbjct: 4 LIVGTDGLSRPSWAAQDPLMRDYYDTEWGMPIRDEQGLFERVSLEAFQSGLSWATILRKR 63 Query: 69 ENFRAAFDGFDFHRVARYTEPDIGRLLGDAGIIRNRAKIVSAINNARRAIELVEEAGSLA 128 ++FRAAF FD VA++T+ DI RL+ DAGI+RN+ KI++ INNA+ ++L E G L Sbjct: 64 DSFRAAFSQFDPELVAKFTDADIERLMEDAGIVRNKRKILATINNAKATLQL-REKGGLV 122 Query: 129 AWFWQFEPAAKDRPKVLTLDYWQANPT-SEASVALSKALKKRGWTFVGPTTIYAFMQAMG 187 + W F+P +P+ L + PT S SVALSKALKK G++FVGPTT++A M+A+G Sbjct: 123 EFVWGFKPIDTPQPETL-----EEIPTQSPESVALSKALKKEGFSFVGPTTMFALMEAIG 177 Query: 188 LVNDHLTGCACR 199 +V+ HL G R Sbjct: 178 IVDTHLVGSHRR 189