BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0025.p         (156 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMa0592 [R] COG3550 Uncharacterized protein related to capsule b...    67   2e-11
NMB1761 [R] COG3550 Uncharacterized protein related to capsule b...    60   2e-09

>SMa0592 [R] COG3550 Uncharacterized protein related to capsule biosynthesis
           enzymes Sme Sinorhizobium meliloti
          Length = 390

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 11  LTAIADRLPFGLRSDAENFLLIHRFDRDAGTATGRLHMEDFAQITGTPLGVVLLER-SVK 69
           LTA+ D          E  L++ RFDR       +L +ED AQI   P G     +    
Sbjct: 191 LTAVVD----------ETALIVTRFDRRPNGE--KLRLEDCAQILSKPKGQDYAGKYDAA 238

Query: 70  GAALGVVLLERSVKGEEDLFELLRRIKVNELLGNFDAHLKNFSMLYRTPQAAELSPAYDI 129
              +  ++ + S +   DL     R+ V  L+GN DAHLKNFS+L  TP    LSPAYD+
Sbjct: 239 YEDIAAIIRQHSSRAPIDLLRFFNRLIVFTLIGNCDAHLKNFSLL-ETPTGLRLSPAYDV 297

Query: 130 VAYSAYLAGHGHALAFAPG 148
           V  +A+  G    LA + G
Sbjct: 298 VN-TAFYDGFDQTLALSIG 315


>NMB1761 [R] COG3550 Uncharacterized protein related to capsule biosynthesis
           enzymes Nme Neisseria meningitidis MC58
          Length = 417

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 24  SDAENFLLIHRFD-RDAGTATGRLHMEDFAQITGTPLGVVLLERSVKGAALGVVLLERSV 82
           S+  + LL+ RFD  + G   G   MEDF     T L    +E   KG+   +  + R +
Sbjct: 215 SEDSSVLLVRRFDVSEQGYFLG---MEDF-----TSLRQYSVEDKYKGSYAAIAQIIRQI 266

Query: 83  KG--EEDLFELLRRIKVNELLGNFDAHLKNFSMLYRTPQAAELSPAYDIVAYSAYLAG 138
            G  +EDL     ++  + +L N DAHLKNFS+LY       L+P YD++  S Y  G
Sbjct: 267 SGRPDEDLIHFFNQLAASCILKNGDAHLKNFSVLYHDEYDVRLAPVYDVLDTSIYRVG 324