BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0001.p (1034 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1545 [T] COG5001 Predicted signal transduction protein contai... 289 2e-77 SMc00038_4 [T] COG2200 FOG Sme Sinorhizobium meliloti 254 5e-67 PA0575_4 [T] COG2200 FOG Pae Pseudomonas aeruginosa 251 5e-66 all4225_2 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 251 9e-66 CC0896 Non COG 248 5e-65 >RSc1545 [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Rso Ralstonia solanacearum Length = 776 Score = 289 bits (739), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 164/430 (38%), Positives = 248/430 (57%), Gaps = 11/430 (2%) Query: 597 KAEERIRHLAHYDELTGLPNRFLCTQHISNAIAHAEHRGGQVAVFLMDLDRFKNINDTFG 656 +AE RIR LAHYD LTGL NR + + +A E R G + +DLD FK +NDT G Sbjct: 333 EAENRIRQLAHYDTLTGLANRTNFREQLDARLAAPEARLG---LLYIDLDGFKLVNDTKG 389 Query: 657 HETGEALLSEIALRFRH-CLRELDILARVGGDEFIVLVDDYDDPLQLGEIAQKLLSVARK 715 H G+ALL +A R R C R +AR+GGDEF VLV +DD + +A L+ Sbjct: 390 HRAGDALLERVAQRLRAVCDRPGMAIARLGGDEFAVLVP-HDDADRAATLATALIEALGA 448 Query: 716 PFDISGHE-CQLSASIGIATYPTDGANAQTLIKNADIAMYRAKHNGKDDYRFYSDEVNTH 774 P+ + + ++ ASIGIA P G + + L+ ADIA+Y AK GK R + ++ T Sbjct: 449 PYALGADQNVRIGASIGIALAPAHGRDTENLLARADIALYAAKAAGKGLARLFCADMETR 508 Query: 775 TVERIALETELRRAIERRE-FVVHYQPKVELASARIVGAEALVRWQHPVRGLLAPAEFIG 833 R LE +LR A+E ++ V YQP V++A+ ++ EALVRW H RG + P EF+ Sbjct: 509 IQARALLEAQLRAALEHQDRLFVFYQPIVDVATGKVTAREALVRWHHAERGWVPPDEFVP 568 Query: 834 LAEEAGLIDQIGLLVLDSACADIVKLTQLNLPFGRIAINLAGSQFNDDNLLADIQRVVQA 893 +AE++GLIDQ+G VL AC + + R+A+N++ Q L + + Sbjct: 569 IAEQSGLIDQLGRFVLHRACREATRWED----GARVAVNVSPMQLGKATLAQTVHAALID 624 Query: 894 RGVSSASLEFEITESMVMHNREQAIAIMDGIRALGFTISIDDFGTGYSSLAYLKRFPVDN 953 G++ LE E+TE+ ++ N ++ + + +G +++DDFGTGYSSLA+L+ FP D Sbjct: 625 SGLAPDRLEIEVTETALIQNEAESFEDLRQLYDMGVRVALDDFGTGYSSLAHLRAFPFDK 684 Query: 954 VKIDRSFITDIPHDANGSAIVQAIIAMAHALNLKVVTEGVETEVQLQALQVFGSDEYQGY 1013 +KIDRSF+ D+ + + +V+AI + L + V EGVET+ ++ ++ G E QGY Sbjct: 685 IKIDRSFVRDLLERPDSAVLVRAIADLGRQLGVTTVAEGVETQAHVRGIREAGCTEAQGY 744 Query: 1014 FFSRPVPHEQ 1023 ++ RP P ++ Sbjct: 745 YYGRPAPSDE 754 >SMc00038_4 [T] COG2200 FOG Sme Sinorhizobium meliloti Length = 257 Score = 254 bits (650), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 124/248 (50%), Positives = 171/248 (68%) Query: 777 ERIALETELRRAIERREFVVHYQPKVELASARIVGAEALVRWQHPVRGLLAPAEFIGLAE 836 E++ + ELR A+ R EF++H+QP++ L + RI AEAL+RWQHPVRG+++PA FI LAE Sbjct: 1 EKLQSQEELREALAREEFLLHFQPQMSLETGRIFAAEALLRWQHPVRGIISPAAFIPLAE 60 Query: 837 EAGLIDQIGLLVLDSACADIVKLTQLNLPFGRIAINLAGSQFNDDNLLADIQRVVQARGV 896 E GLI IG VL +AC + LP +++N++ QF + N A + V++ + Sbjct: 61 ETGLIVPIGDWVLRTACRQLKAWQDAGLPPLIVSVNVSARQFRERNWAARVAAVLEETCL 120 Query: 897 SSASLEFEITESMVMHNREQAIAIMDGIRALGFTISIDDFGTGYSSLAYLKRFPVDNVKI 956 + LE E+TES++M + AIA M + A+G ++IDDFGTGYSSL+ LKRFPV +KI Sbjct: 121 EARYLELELTESLIMQDVPGAIATMHALEAIGVHLAIDDFGTGYSSLSALKRFPVRRLKI 180 Query: 957 DRSFITDIPHDANGSAIVQAIIAMAHALNLKVVTEGVETEVQLQALQVFGSDEYQGYFFS 1016 DRSF+TDIPHDA+ AI AII++A L L+V+ EGVETE Q++ LQ G E QGYFFS Sbjct: 181 DRSFVTDIPHDADDMAITSAIISLAQKLGLRVIAEGVETEAQVEFLQKSGCGEIQGYFFS 240 Query: 1017 RPVPHEQF 1024 +P+P E F Sbjct: 241 QPLPGEDF 248 >PA0575_4 [T] COG2200 FOG Pae Pseudomonas aeruginosa Length = 267 Score = 251 bits (642), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 122/258 (47%), Positives = 180/258 (69%), Gaps = 1/258 (0%) Query: 777 ERIALETELRRAIERREFVVHYQPKVELASARIVGAEALVRWQHPVRGLLAPAEFIGLAE 836 ER+ALETELRRA+ER E ++YQPK+ L S +VGAEALVRW HP+ G ++P FI LAE Sbjct: 1 ERMALETELRRALERDELQLYYQPKLSLESGLLVGAEALVRWYHPLFGEISPERFIPLAE 60 Query: 837 EAGLIDQIGLLVLDSACADIVKLTQLNLPFGRIAINLAGSQFNDDNLLADIQRVVQARGV 896 + GLI +G VL+ AC + + +L+ PFG +++NLAG+Q L+ ++++++ G+ Sbjct: 61 DCGLILPLGDWVLEHACQQMGEWQKLHAPFGPLSVNLAGAQLGQPQLIERLEQLLEQSGL 120 Query: 897 SSASLEFEITESMVMHNREQAIAIMDGIRALGFTISIDDFGTGYSSLAYLKRFPVDNVKI 956 + L+ EITES +M+ E+A+A++ G++ LG ++IDDFGTGYSSL+YLKR P+D +KI Sbjct: 121 EPSRLQLEITESFIMNQTEEALAVLHGLKRLGVQLAIDDFGTGYSSLSYLKRLPLDILKI 180 Query: 957 DRSFITDIPHDANGSAIVQAIIAMAHALNLKVVTEGVETEVQLQALQVFGSDEYQGYFFS 1016 D+SFI +P D + +AI +AIIA+ ++ L V+ EGVETE Q L G ++ QG+ S Sbjct: 181 DKSFIRGLPDDPHDAAITRAIIALGRSMQLTVIAEGVETEGQQSFLTHEGCEQIQGFVLS 240 Query: 1017 RPVPHEQFV-EILQRRHP 1033 P+P E F + L+ R P Sbjct: 241 PPLPAELFASKFLKPRQP 258 >all4225_2 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 Length = 260 Score = 251 bits (640), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 120/256 (46%), Positives = 174/256 (67%) Query: 777 ERIALETELRRAIERREFVVHYQPKVELASARIVGAEALVRWQHPVRGLLAPAEFIGLAE 836 ER+ALE EL A+ER E VV+YQP ++L + +I EALVRWQHP RGL++PA+FI +AE Sbjct: 1 ERLALENELHGALERNEIVVYYQPIIDLQTKQITAVEALVRWQHPTRGLVSPAKFIPIAE 60 Query: 837 EAGLIDQIGLLVLDSACADIVKLTQLNLPFGRIAINLAGSQFNDDNLLADIQRVVQARGV 896 GLI +IG VL +AC LP R+++NL+ QF + NL+ + ++Q G+ Sbjct: 61 ANGLIVEIGEWVLRTACLQNRTWQLAGLPPIRMSVNLSARQFEESNLVELVSEIIQESGL 120 Query: 897 SSASLEFEITESMVMHNREQAIAIMDGIRALGFTISIDDFGTGYSSLAYLKRFPVDNVKI 956 + LE E+TES +M + ++++ I+ +R LG +++DDFGTGYSSL YLKRFPV+ +KI Sbjct: 121 HPSYLELEVTESSLMTDIQRSVTILKQLRELGVWLALDDFGTGYSSLNYLKRFPVNMLKI 180 Query: 957 DRSFITDIPHDANGSAIVQAIIAMAHALNLKVVTEGVETEVQLQALQVFGSDEYQGYFFS 1016 DRSF+ D+ + + +A+ AIIA+A +L LK+ EG+ET+ QL LQ G E QGY+F Sbjct: 181 DRSFVQDVCSNPDSAAVTNAIIALAKSLQLKITAEGIETQQQLSYLQKRGCQEGQGYYFG 240 Query: 1017 RPVPHEQFVEILQRRH 1032 P P ++ +EILQ + Sbjct: 241 IPAPAKEIMEILQPKE 256 >CC0896 Non COG Length = 677 Score = 248 bits (633), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 147/446 (32%), Positives = 236/446 (52%), Gaps = 4/446 (0%) Query: 577 EYLHLTGVAADLASVAIESRKAEERIRHLAHYDELTGLPNRFLCTQHISNAIAHAEHRGG 636 E+ L L A E+R+ + LA+ D LT LPNR + + A G Sbjct: 200 EFSDLVQSRVTLTQKAEEARRLSDENDRLANLDSLTDLPNRRRYFAELDARVEAARQSGR 259 Query: 637 QVAVFLMDLDRFKNINDTFGHETGEALLSEIALRFRHCLRELDILARVGGDEFIVLVDDY 696 ++DLD FK IND FGH TG+ LL E+ R + + AR+GGDEF +++D Sbjct: 260 GFVAGVIDLDDFKPINDAFGHATGDRLLIEVGRRLKAFDGAPILAARLGGDEFGLIIDAA 319 Query: 697 DDPLQLGEIAQKLLSVARKPFDISGHECQLSASIGIATYPTDGANAQTLIKNADIAMYRA 756 +P L + ++L + + +D+ G Q+ ASIG +P+ ++ L + AD A+Y A Sbjct: 320 LEPDALRVLGRELCASLQATYDLRGVRAQVGASIGFCPFPSGADTSEQLFERADYALYHA 379 Query: 757 KHNGKDDYRFYSDEVNTHTVERIALETELRRAIERREFVVHYQPKVELASARIVGAEALV 816 K NGK + + + +E LR A +E VH+QP V++ S R + EAL Sbjct: 380 KQNGKGAAVVFDERHEAAIRDMAVVEQALRSADLEQEMSVHFQPLVDIVSQRTIALEALA 439 Query: 817 RWQHPVRGLLAPAEFIGLAEEAGLIDQIGLLVLDSACADIVKLTQLNLPFGRIAINLAGS 876 RW P G + P FIG AE +G I +I L++ A ++ + +++ R++INL+ Sbjct: 440 RWTSPEIGPIRPDVFIGAAERSGQIVEITRLLVAKALREM-RAWPMDV---RVSINLSAR 495 Query: 877 QFNDDNLLADIQRVVQARGVSSASLEFEITESMVMHNREQAIAIMDGIRALGFTISIDDF 936 + + +V ++ ++FEITE+ ++ + +QA + LG ++DDF Sbjct: 496 DIASMENVRRLLAIVSESCIAPHRIDFEITETAIVCDFDQARDALAAFHELGVRTALDDF 555 Query: 937 GTGYSSLAYLKRFPVDNVKIDRSFITDIPHDANGSAIVQAIIAMAHALNLKVVTEGVETE 996 GTG+SSL++L+ P+D +KID SF++DI H+ IV+ ++ + L ++ V EGVETE Sbjct: 556 GTGHSSLSHLRLLPLDKLKIDASFVSDIEHNPTSEDIVRTVLQLGRNLRMECVVEGVETE 615 Query: 997 VQLQALQVFGSDEYQGYFFSRPVPHE 1022 Q + G+ QGY F+RP+P E Sbjct: 616 AQRDRVAALGATVMQGYHFARPMPAE 641