BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0006.0035.p         (77 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA2153 [G] COG0296 1,4-alpha-glucan branching enzyme Pae Pseudom...    64   8e-11

>PA2153 [G] COG0296 1,4-alpha-glucan branching enzyme Pae Pseudomonas
           aeruginosa
          Length = 732

 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 6/61 (9%)

Query: 11  YVLHVAWPGKNGKREEVQITEDPYAFGLLVSDFDLHLFREGRHRQLGRCLGSQVMRIDGV 70
           Y L V WP      + VQ +EDPYAFG L+ + DL+LF EG HRQL  CLG+Q+ R +GV
Sbjct: 87  YRLRVHWP------DGVQESEDPYAFGPLLGELDLYLFAEGNHRQLASCLGAQLTRHEGV 140

Query: 71  D 71
           +
Sbjct: 141 E 141