BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0005.p (352 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA4024 [E] COG4303 Ethanolamine ammonia-lyase, large subunit Pae... 288 1e-77 RSc3127 Non COG 280 5e-75 lin1139 [E] COG4303 Ethanolamine ammonia-lyase, large subunit Li... 178 2e-44 CAC2718 [E] COG4303 Ethanolamine ammonia-lyase, large subunit Ca... 171 2e-42 FN0079 [E] COG4303 Ethanolamine ammonia-lyase, large subunit Fnu... 167 3e-41 >PA4024 [E] COG4303 Ethanolamine ammonia-lyase, large subunit Pae Pseudomonas aeruginosa Length = 464 Score = 288 bits (738), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 140/204 (68%), Positives = 167/204 (81%), Gaps = 2/204 (0%) Query: 2 AQMALAELPLRIFLNETLAPYETDEVTRLIIDEHDAAAFATISHLTVGDFRNWLLGDDVD 61 AQMALA++PL+ FL+E L PYE DEVTRLIID H AFA +SHLTVG FR+WLLGD D Sbjct: 48 AQMALADIPLKHFLDEALIPYEDDEVTRLIIDTHQRDAFAPVSHLTVGGFRDWLLGDAAD 107 Query: 62 SATLSAVAPGITPEMAAAVSKIMRNQDLILVAKKCRVVTAFRNTIGLAGRLSTRLQPNHP 121 A+L A+APG+TPEMAAAVSKIMR QDL+LVA+K RVVT FRNT+GL GRLSTRLQPNHP Sbjct: 108 EASLRALAPGLTPEMAAAVSKIMRVQDLVLVAQKIRVVTRFRNTLGLRGRLSTRLQPNHP 167 Query: 122 TDDATGIAASLLDGLVYGSGDAVFGINPATDNVPQVVNLVTMMADIIARYEIPTQSCVLT 181 TDD GIAAS+LDGL++G+GDA+ GINPATD++ + L+ M+ II RYEIPTQ+CVLT Sbjct: 168 TDDPAGIAASILDGLLFGNGDAMLGINPATDSMASICALLEMLDAIIQRYEIPTQACVLT 227 Query: 182 HVTNTIAAIERGAP--VVTNTIAA 203 HVT++I AI RG P +V +IA Sbjct: 228 HVTSSIEAINRGVPLDLVFQSIAG 251 >RSc3127 Non COG Length = 464 Score = 280 bits (715), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 139/194 (71%), Positives = 164/194 (84%) Query: 3 QMALAELPLRIFLNETLAPYETDEVTRLIIDEHDAAAFATISHLTVGDFRNWLLGDDVDS 62 QMALAE+PLR FL+E + PYE DEVTRLI+D HDAAAFA +SHLTVGDFR+WLLGD D Sbjct: 49 QMALAEIPLRHFLDEAVIPYEADEVTRLIVDTHDAAAFAPVSHLTVGDFRDWLLGDAADE 108 Query: 63 ATLSAVAPGITPEMAAAVSKIMRNQDLILVAKKCRVVTAFRNTIGLAGRLSTRLQPNHPT 122 A L+A+APG+TPEMAAAVSK+MR QDLILVA+K RVVT FRNTIGL GR++TRLQPNHPT Sbjct: 109 AALAALAPGLTPEMAAAVSKLMRVQDLILVAQKTRVVTRFRNTIGLRGRMATRLQPNHPT 168 Query: 123 DDATGIAASLLDGLVYGSGDAVFGINPATDNVPQVVNLVTMMADIIARYEIPTQSCVLTH 182 DD GIAASLLDGL+YGSGDAV G+NP +D+ + +L+ M+ +I RY+IPTQ+CVLTH Sbjct: 169 DDPAGIAASLLDGLMYGSGDAVIGVNPVSDSTAAICDLLGMLDAVIRRYDIPTQACVLTH 228 Query: 183 VTNTIAAIERGAPV 196 VT T+ AI RG PV Sbjct: 229 VTTTLEAIRRGMPV 242 >lin1139 [E] COG4303 Ethanolamine ammonia-lyase, large subunit Lin Listeria innocua Length = 454 Score = 178 bits (452), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 93/204 (45%), Positives = 128/204 (62%), Gaps = 2/204 (0%) Query: 2 AQMALAELPLRIFLNETLAPYETDEVTRLIIDEHDAAAFATISHLTVGDFRNWLLGDDVD 61 A++ L+++ L N + PYETDEVTR+I D+ + +I + TV + R W+L Sbjct: 47 AKVVLSKMTLGDLRNNPVVPYETDEVTRIIQDQVNERIHDSIKNWTVEELREWILDHKTT 106 Query: 62 SATLSAVAPGITPEMAAAVSKIMRNQDLILVAKKCRVVTAFRNTIGLAGRLSTRLQPNHP 121 A + VA G+T E+ AAV+K+M N DLI AKK RV+ TIGL G S RLQPNHP Sbjct: 107 DADIKRVARGLTSEIIAAVTKLMSNLDLIYGAKKIRVIAHANTTIGLPGTFSARLQPNHP 166 Query: 122 TDDATGIAASLLDGLVYGSGDAVFGINPATDNVPQVVNLVTMMADIIARYEIPTQSCVLT 181 TDD GI ASL++GL YG GDAV G+NP D+ VV L+ + +++++PTQ+CVL Sbjct: 167 TDDPDGILASLMEGLTYGIGDAVIGLNPVDDSTDSVVRLLNKFEEFRSKWDVPTQTCVLA 226 Query: 182 HVTNTIAAIERGAP--VVTNTIAA 203 HV + A+ RGAP +V +IA Sbjct: 227 HVKTQMEAMRRGAPTGLVFQSIAG 250 >CAC2718 [E] COG4303 Ethanolamine ammonia-lyase, large subunit Cac Clostridium acetobutylicum Length = 451 Score = 171 bits (434), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 84/195 (43%), Positives = 119/195 (61%), Gaps = 2/195 (1%) Query: 2 AQMALAELPLRIFLNETLAPYETDEVTRLIIDEHDAAAFATISHLTVGDFRNWLLGDDVD 61 A+ LA++ L N + YE DE+TR+I D D + I LTVG+FR +LL +D D Sbjct: 47 AKTVLADITLEELRNNPVVSYEKDEITRVIQDSVDEEQYKKIKALTVGEFREFLLENDED 106 Query: 62 SATLSAVAPGITPEMAAAVSKIMRNQDLILVAKKCRVVTAFRNTIGLAGRLSTRLQPNHP 121 + + G+T EM AAV+K+M N DL+ A+K TIG G S+RLQPNHP Sbjct: 107 K--IKEIRDGLTSEMIAAVTKLMSNMDLVYAAQKICNTAKCNTTIGRRGTFSSRLQPNHP 164 Query: 122 TDDATGIAASLLDGLVYGSGDAVFGINPATDNVPQVVNLVTMMADIIARYEIPTQSCVLT 181 TD+ GI ASL+DG+ YG GDAV G+NP D + V +++ + D ++ IPTQ+CVL Sbjct: 165 TDNPQGIMASLIDGISYGVGDAVIGLNPVADTIESVSDVLKVFNDFTRKWRIPTQNCVLA 224 Query: 182 HVTNTIAAIERGAPV 196 H+T + A++ G P+ Sbjct: 225 HITTQMEALKNGVPI 239 >FN0079 [E] COG4303 Ethanolamine ammonia-lyase, large subunit Fnu Fusobacterium nucleatum Length = 455 Score = 167 bits (424), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 88/195 (45%), Positives = 119/195 (61%) Query: 2 AQMALAELPLRIFLNETLAPYETDEVTRLIIDEHDAAAFATISHLTVGDFRNWLLGDDVD 61 A++ L+++ L+ PYE DEVTR+IID+ + + I TV D R WLL ++ Sbjct: 47 AKVVLSKITLKDLKENPAVPYEEDEVTRIIIDDLNLQIYDEIKDWTVSDLREWLLSEEAT 106 Query: 62 SATLSAVAPGITPEMAAAVSKIMRNQDLILVAKKCRVVTAFRNTIGLAGRLSTRLQPNHP 121 + ++ + G+T EM AAV+K+M N DLI+ AKK V TIG L+ RLQPNH Sbjct: 107 PSKINWIRRGLTSEMIAAVAKLMSNMDLIVAAKKIEVRAHCNTTIGGYDTLAVRLQPNHT 166 Query: 122 TDDATGIAASLLDGLVYGSGDAVFGINPATDNVPQVVNLVTMMADIIARYEIPTQSCVLT 181 TDD GI S L+GL YG GDAV G+NP D+V V+ ++ I Y+IPTQ+CVL Sbjct: 167 TDDPDGIMISTLEGLSYGIGDAVIGLNPVDDSVDSVMAVMERFHKIKTEYQIPTQTCVLA 226 Query: 182 HVTNTIAAIERGAPV 196 HVT + AI+RGA V Sbjct: 227 HVTTQMEAIKRGAKV 241