BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0006.0004.p         (97 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc3127 Non COG                                                        84   8e-17
PA4024 [E] COG4303 Ethanolamine ammonia-lyase, large subunit Pae...    80   1e-15
STM2458 [E] COG4303 Ethanolamine ammonia-lyase, large subunit St...    68   5e-12
eutB [E] COG4303 Ethanolamine ammonia-lyase, large subunit Eco E...    68   5e-12
ZeutB [E] COG4303 Ethanolamine ammonia-lyase, large subunit EcZ ...    68   5e-12

>RSc3127 Non COG
          Length = 464

 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 38/46 (82%), Positives = 42/46 (91%)

Query: 1   MDNLLTLLATAGCSFVMGIPGSDDIMLNYQTTSFHDALYVRRVLGL 46
           MD LLTLL  AG +++MGIPGSDD+MLNYQTTSFHDALYVRRVLGL
Sbjct: 378 MDTLLTLLGAAGVNYIMGIPGSDDVMLNYQTTSFHDALYVRRVLGL 423


>PA4024 [E] COG4303 Ethanolamine ammonia-lyase, large subunit Pae
           Pseudomonas aeruginosa
          Length = 464

 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/46 (78%), Positives = 40/46 (86%)

Query: 1   MDNLLTLLATAGCSFVMGIPGSDDIMLNYQTTSFHDALYVRRVLGL 46
           MD LLTLL  AG +F+MGIPGSDD+MLNYQTTSFHDALY R+ LGL
Sbjct: 378 MDMLLTLLGVAGINFIMGIPGSDDVMLNYQTTSFHDALYARQTLGL 423


>STM2458 [E] COG4303 Ethanolamine ammonia-lyase, large subunit Sty
           Salmonella typhimurium LT2
          Length = 453

 Score = 68.2 bits (165), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/45 (64%), Positives = 38/45 (84%)

Query: 2   DNLLTLLATAGCSFVMGIPGSDDIMLNYQTTSFHDALYVRRVLGL 46
           +NL+ LLATAGC+++MG+P  DDIMLNYQTT+FHD   VR++L L
Sbjct: 377 ENLMILLATAGCNYIMGMPLGDDIMLNYQTTAFHDTATVRQLLNL 421


>eutB [E] COG4303 Ethanolamine ammonia-lyase, large subunit Eco
           Escherichia coli K12
          Length = 467

 Score = 68.2 bits (165), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/45 (64%), Positives = 38/45 (84%)

Query: 2   DNLLTLLATAGCSFVMGIPGSDDIMLNYQTTSFHDALYVRRVLGL 46
           +NL+ LLATAGC+++MG+P  DDIMLNYQTT+FHD   VR++L L
Sbjct: 391 ENLMILLATAGCNYIMGMPLGDDIMLNYQTTAFHDTATVRQLLNL 435


>ZeutB [E] COG4303 Ethanolamine ammonia-lyase, large subunit EcZ
           Escherichia coli O157:H7 EDL933
          Length = 453

 Score = 68.2 bits (165), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/45 (64%), Positives = 38/45 (84%)

Query: 2   DNLLTLLATAGCSFVMGIPGSDDIMLNYQTTSFHDALYVRRVLGL 46
           +NL+ LLATAGC+++MG+P  DDIMLNYQTT+FHD   VR++L L
Sbjct: 377 ENLMILLATAGCNYIMGMPLGDDIMLNYQTTAFHDTATVRQLLNL 421