BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0302.p         (210 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

STM1678 Non COG                                                       208   5e-54

>STM1678 Non COG
          Length = 309

 Score =  208 bits (530), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 97/201 (48%), Positives = 140/201 (69%)

Query: 1   MKLARAALQARIPRYFPWQFGVDFDVIGRGSPQDIFDAQLDVRELLRSQHQTEWVIISTG 60
           +K+ RA L+A + RYFPWQFGV++DV+G+GS Q ++D Q DVR LLR Q+ TEWVI+STG
Sbjct: 106 IKITRAVLEAGVKRYFPWQFGVNYDVVGKGSGQPVWDEQYDVRTLLREQNVTEWVIVSTG 165

Query: 61  MFMSYLFEPEFGVVDLQNHAVHALGSLDTAVTLTTPDDIGALTAEVMFAKPRIQNEIVYL 120
           +F S+LFEP FGVV+L    ++ALG  +  VT+T+P DIG LT E+   +PRI NE+V++
Sbjct: 166 IFTSFLFEPAFGVVNLAKKTINALGGWEMQVTVTSPADIGRLTTEIYLHQPRITNEVVFV 225

Query: 121 AGDTVTYGEVADKLEVSLGRPFTRSEWSEEYLLGELARDPHNMMRKYRAAFAQGRGVAWD 180
           AG+T +Y ++A+ +E    + FTR   +   L  +L   PH+ M +YR AFA+G G+ W 
Sbjct: 226 AGETTSYAKLAETVERVTQQTFTRGVLTLPDLQEQLRLHPHDPMLRYRVAFARGDGMWWP 285

Query: 181 KSGTFNSQRALAVTDVASWIN 201
            S T+N+Q  L   D+A+W+ 
Sbjct: 286 MSDTWNAQHHLPTQDIAAWLK 306