BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0260.p (237 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SP0753 [E] COG0410 ABC-type branched-chain amino acid transport ... 192 5e-49 BMEII0873 [E] COG0410 ABC-type branched-chain amino acid transpo... 190 2e-48 mll3974 Non COG 184 1e-46 DR1034 [E] COG0410 ABC-type branched-chain amino acid transport ... 182 5e-46 BMEI0261 [E] COG0410 ABC-type branched-chain amino acid transpor... 182 6e-46 >SP0753 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Spn Streptococcus pneumoniae TIGR4 Length = 236 Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 95/226 (42%), Positives = 141/226 (62%), Gaps = 3/226 (1%) Query: 1 MIALENAHVRYGQATVLSEVSITASQDEIIAIIGRNGAGKSTTLKTLIGLLPLHHGKRAY 60 M+ +EN V YG + +VS ++ E++++IG NGAGK+T L+TL GL+ GK + Sbjct: 3 MLKVENLSVHYGMIQAVRDVSFEVNEGEVVSLIGANGAGKTTILRTLSGLVRPSSGKIEF 62 Query: 61 FGRDISRLPVEQISRLGVALVPDSRRIFPNLSVMENLRMGGL---GHAPGYWSIPRVLEI 117 G++I ++P ++I G++ VP+ R +FP L+VMENL MG ++ +V Sbjct: 63 LGQEIQKMPAQKIVASGLSQVPEGRHVFPGLTVMENLEMGAFLKKNREENQANLKKVFSR 122 Query: 118 FPRLQERIGFGGDQLSGGEQQMLAIARALLGNPKILLLDEPTEGLAPLIVNNLIDIFALV 177 FPRL+ER LSGGEQQMLA+ RAL+ PK+LLLDEP+ GLAP+ + + DI + Sbjct: 123 FPRLEERKNQDAATLSGGEQQMLAMGRALMSTPKLLLLDEPSMGLAPIFIQEIFDIIQDI 182 Query: 178 HRQGTGIVLVEQNLKVPMRLAQRQYVLDHGSVAWSGTSAELAQQRE 223 +QGT ++L+EQN + ++ R YVL+ G + SGT ELA E Sbjct: 183 QKQGTTVLLIEQNANKALAISDRGYVLETGRIVLSGTGKELASSEE 228 >BMEII0873 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 252 Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 93/228 (40%), Positives = 149/228 (65%), Gaps = 4/228 (1%) Query: 1 MIALENAHVRYGQATVLSEVSITASQDEIIAIIGRNGAGKSTTLKTLIGLLPLHHGKRAY 60 M+ LE+ YG+ T+L +VS+ + EI+ I+G NGAGK+TTL+T++G + GK + Sbjct: 19 MLTLEHVDAGYGRTTILQDVSLEVKEGEIVTIVGANGAGKTTTLRTIVGQIQPRAGKITF 78 Query: 61 FGRDISRLPVEQISRLGVALVPDSRRIFPNLSVMENLRMGGL---GHAPGYWSIPRVLEI 117 G DI+ LP ++ G+ L+P+ R++FP+++V ENL+MG A + VLE+ Sbjct: 79 LGEDITHLPAHEVVDRGIILIPEGRQLFPDMTVRENLQMGTYRRAARAAQESRMEEVLEL 138 Query: 118 FPRLQERIGFGGDQLSGGEQQMLAIARALLGNPKILLLDEPTEGLAPLIVNNLIDIFALV 177 FPR++ER+ LSGGEQQM+AIAR ++ NP+IL+ DEP+ GLAP++V+ + D+ + Sbjct: 139 FPRVRERLDQTASSLSGGEQQMVAIARGMMANPRILMFDEPSLGLAPIVVSQVFDVVRKI 198 Query: 178 HRQGTGIVLVEQNLKVPMRLAQRQYVLDHGSVAWSGTSAELAQQREHV 225 GT +++VEQN+ +++A R YVL++G V + +S L +HV Sbjct: 199 AATGTTVLIVEQNVFTTLKVANRGYVLENGRVVLADSSEALLNN-DHV 245 >mll3974 Non COG Length = 242 Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 101/221 (45%), Positives = 141/221 (63%), Gaps = 3/221 (1%) Query: 1 MIALENAHVRYGQATVLSEVSITASQDEIIAIIGRNGAGKSTTLKTLIGLLPLHHGKRAY 60 ++ ++ YG L+ V +T + EI+A+IG NGAGKST + T+ G G + Sbjct: 6 LLDIKGVETYYGNIRALNGVDVTVKEGEIVALIGANGAGKSTLMMTIFGAPRARTGTITF 65 Query: 61 FGRDISRLPVEQISRLGVALVPDSRRIFPNLSVMENLRMGG-LGHAPGY-WSIPRVLEIF 118 G DI++LP +I+R+ +A P+ RRIFP ++VMENL+MG L + Y + +V +F Sbjct: 66 AGTDITQLPTHEIARMRIAQSPEGRRIFPRMTVMENLQMGASLDNLKHYDEDVEKVFTLF 125 Query: 119 PRLQERIGFGGDQLSGGEQQMLAIARALLGNPKILLLDEPTEGLAPLIVNNLIDIFALVH 178 PRL+ERI G LSGGEQQML+I RAL+ PK+LLLDEP+ GLAPLIV + D ++ Sbjct: 126 PRLKERIAQRGGTLSGGEQQMLSIGRALMARPKLLLLDEPSLGLAPLIVKQIFDAIRELN 185 Query: 179 R-QGTGIVLVEQNLKVPMRLAQRQYVLDHGSVAWSGTSAEL 218 R QG + LVEQN ++LA R YV+ +G+V SGT EL Sbjct: 186 RTQGLTVFLVEQNAFGALKLATRGYVMVNGNVTMSGTGKEL 226 >DR1034 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Dra Deinococcus radiodurans Length = 252 Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 98/224 (43%), Positives = 145/224 (64%), Gaps = 4/224 (1%) Query: 1 MIALENAHVRYGQATVLSEVSITASQDEIIAIIGRNGAGKSTTLKTLIGLLPLHHGKRAY 60 ++ L+N H YGQ L +++T ++ EI+A+IG NGAGK+TTL+T+ G++ G Y Sbjct: 17 VLELQNVHSYYGQIEALKGLNMTVNEGEIVALIGGNGAGKTTTLRTISGMMKPKTGSVTY 76 Query: 61 FGRDISRLPVEQISRLGVALVPDSRRIFPNLSVMENLRMGGL---GHAPGYWSIPRVLEI 117 G++++ +P Q+ G+A VP+ RRIFP ++V ENL +G A I E+ Sbjct: 77 LGQNVTGVPSHQLIGRGMAHVPEGRRIFPQMTVRENLEVGAYTVNDKAAINARIEEGFEL 136 Query: 118 FPRLQERIGFGGDQLSGGEQQMLAIARALLGNPKILLLDEPTEGLAPLIVNNLIDIFALV 177 FPRL+ER G +SGGEQQMLAIARAL+ PK+LLLDEP+ GL+PL V N+ I + Sbjct: 137 FPRLRERESQLGGTMSGGEQQMLAIARALMIAPKVLLLDEPSMGLSPLFVENIFSIIERL 196 Query: 178 HRQ-GTGIVLVEQNLKVPMRLAQRQYVLDHGSVAWSGTSAELAQ 220 +++ GT I+LVEQN + + +A R YVL G + SG + ++A+ Sbjct: 197 NKERGTTILLVEQNASMALAIADRAYVLQTGEIKLSGNAQDIAR 240 >BMEI0261 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 249 Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 102/238 (42%), Positives = 147/238 (61%), Gaps = 4/238 (1%) Query: 1 MIALENAHVRYGQATVLSEVSITASQDEIIAIIGRNGAGKSTTLKTLIGLLPLHHGKRAY 60 ++++E YG L + +T + EI+A+IG NGAGKST + T+ G G+ + Sbjct: 13 LLSVEKVETYYGNICALKGIDMTVDEGEIVALIGANGAGKSTLMMTIFGSPRARTGRILF 72 Query: 61 FGRDISRLPVEQISRLGVALVPDSRRIFPNLSVMENLRMGGLGHAPGYW--SIPRVLEIF 118 G+DI+ +P +I++L +A P+ RRIFP ++V+ENL+MG Y+ + + ++F Sbjct: 73 NGKDITSMPPHEIAKLRIAQSPEGRRIFPRMTVLENLQMGASLDNQQYFDEDVKLMFDLF 132 Query: 119 PRLQERIGFGGDQLSGGEQQMLAIARALLGNPKILLLDEPTEGLAPLIVNNLIDIFALVH 178 PRL+ERI G LSGGEQQMLAIARAL+ PK+LLLDEP+ GLAPLIV + + ++ Sbjct: 133 PRLKERINQRGGTLSGGEQQMLAIARALMVRPKLLLLDEPSLGLAPLIVKQIFEAIKELN 192 Query: 179 R-QGTGIVLVEQNLKVPMRLAQRQYVLDHGSVAWSGTSAELAQQREHVEAIITTGVEH 235 R QG + LVEQN ++LA R YV+ +GS+ SG+ EL E V A G H Sbjct: 193 RTQGLTVFLVEQNAFGALKLADRGYVMVNGSITMSGSGRELLSDPE-VRAAYLEGGRH 249