BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0241.p (254 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2214 [GEPR] COG0477 Permeases of the major facilitator superfa... 167 1e-41 RSc2352 [GEPR] COG0477 Permeases of the major facilitator superf... 166 5e-41 Z3504 [GEPR] COG0477 Permeases of the major facilitator superfam... 163 3e-40 CC2354 [GEPR] COG0477 Permeases of the major facilitator superfa... 161 1e-39 yfaV [GEPR] COG0477 Permeases of the major facilitator superfami... 161 2e-39 >PA2214 [GEPR] COG0477 Permeases of the major facilitator superfamily Pae Pseudomonas aeruginosa Length = 440 Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 98/254 (38%), Positives = 143/254 (56%), Gaps = 5/254 (1%) Query: 1 VLRFLLGVAEAGFFPGVIYYFTQWLPNGERGKAMAIFLSGSALASILSGPISGALLQIEG 60 VLRFLLGVAEAGFFPG+I Y T W P R +A+ +F G LA +L GP+SG LL+ G Sbjct: 114 VLRFLLGVAEAGFFPGIILYLTYWFPQRSRAQALGLFYFGLPLALVLGGPLSGWLLEFHG 173 Query: 61 -GGLHXWQWMFIIEGLASVVLCGFVWFWLDSRPADAKWLTQSERDLIGNTIAAEQAEREK 119 GL WQW+F+ EGL + ++ +F+L RP DA WL+ ++ + +A E ++ Sbjct: 174 IFGLANWQWLFVTEGLLASLVGIAAYFYLVDRPRDAGWLSDEQKRALEGELAEEDTRKQA 233 Query: 120 IKPAHISTWALLRDSQIVIFCFIYFSISLTIYGATFWLPSIIRK-MGAYSDFQVGLFNSI 178 P + LR Q++ FC +YF+I +++YG F+LP+ I + VGL +I Sbjct: 234 RGPHGF--LSALRSGQVLKFCLVYFTIQMSVYGVVFYLPTRIASFLDGQVGLNVGLITAI 291 Query: 179 PWIISIIAMYLFASLAARFKFQQAWAAAALIIAAIGMYVSTFGGPV-FAFVSICFAAVGF 237 PW+ +++ L A R + A A L +AA G+ S G + A ++ CFAA GF Sbjct: 292 PWVCALVVTRLVTRQADRSGQHRQLAVAMLGMAAAGIAASALAGNLGLAVIAFCFAASGF 351 Query: 238 KAASSLFWPIPQSY 251 + LFW +P Y Sbjct: 352 VSVQPLFWTLPTGY 365 >RSc2352 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 442 Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 97/253 (38%), Positives = 146/253 (57%), Gaps = 9/253 (3%) Query: 1 VLRFLLGVAEAGFFPGVIYYFTQWLPNGERGKAMAIFLSGSALASILSGPISGALLQIEG 60 V+RFLLG+AEAGFFPG+I Y T W P RG+ F++ AL+ ++ GPISG L+ G Sbjct: 127 VMRFLLGLAEAGFFPGIILYLTYWYPAERRGRTTTFFMTAVALSGVIGGPISGWALKTFG 186 Query: 61 G--GLHXWQWMFIIEGLASVVLCGFVWFWLDSRPADAKWLTQSERDLIGNTIAAEQAERE 118 G GL WQWMF+IEG+ SVV+ V +LD+R + A+WLT E+ L+ IAAE+A++E Sbjct: 187 GVYGLAGWQWMFLIEGIPSVVIGLCVLAYLDNRISHARWLTDEEKALLTRNIAAEEAQKE 246 Query: 119 KIKPAHISTWALLRDSQIVIFCFIYFSISLTIYGATFWLPSIIRKMGAYSDFQVGLFNSI 178 A A++ ++ + IYFS + +YG +FWLP++I++ G VGL +I Sbjct: 247 DAPIA-----AIMASPRVWLMSLIYFSFVMGLYGVSFWLPTLIKQTGVADPLSVGLLTAI 301 Query: 179 PWIISIIAMYLFASLAARFKFQQAWAAAALIIAAIGMYVST--FGGPVFAFVSICFAAVG 236 P+ +++AM L A A R + ++ A + AIG+ +S A ++ +G Sbjct: 302 PYGAAVVAMVLVARSADRTRERRWHIAIPALAGAIGLVLSAVWHTNTTLAMAALTLGTMG 361 Query: 237 FKAASSLFWPIPQ 249 LFW +P Sbjct: 362 ILTTLPLFWSLPT 374 >Z3504 [GEPR] COG0477 Permeases of the major facilitator superfamily EcZ Escherichia coli O157:H7 EDL933 Length = 442 Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 90/250 (36%), Positives = 143/250 (57%), Gaps = 7/250 (2%) Query: 1 VLRFLLGVAEAGFFPGVIYYFTQWLPNGERGKAMAIFLSGSALASILSGPISGALLQIEG 60 ++R LLG AEAGFFPG+IY +QW P R M +F G+ LA L P+SGALL++ G Sbjct: 122 IVRTLLGAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTLGSPLSGALLEMHG 181 Query: 61 -GGLHXWQWMFIIEGLASVVLCGFVWFWLDSRPADAKWLTQSERDLIGNTIAAEQAEREK 119 G W WMF+IEGL +V F +FWLD P A++L++ E+ L+ N +A+E+ ++ Sbjct: 182 FMGHPGWFWMFVIEGLLAVGAGVFTFFWLDDTPEQARFLSKLEKTLLINQLASEEQQKVT 241 Query: 120 IKPAHISTWALLRDSQIVIFCFIYFSISLTIYGATFWLPSIIRK-MGAYSDFQVGLFNSI 178 + + LR+ ++ IY +I + +YG F+LP+ + +G F + +I Sbjct: 242 SRLSDA-----LRNGRVWQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFTASVVTAI 296 Query: 179 PWIISIIAMYLFASLAARFKFQQAWAAAALIIAAIGMYVSTFGGPVFAFVSICFAAVGFK 238 PW+ ++ +L + + ++ AA L+ A IG+ +S PV A V++C AA+GF Sbjct: 297 PWVAALFGTWLIPRYSDKTGERRNVAALTLLAAGIGIGLSGLLSPVLAIVALCVAAIGFI 356 Query: 239 AASSLFWPIP 248 A +FW +P Sbjct: 357 AVQPVFWTMP 366 >CC2354 [GEPR] COG0477 Permeases of the major facilitator superfamily Ccr Caulobacter vibrioides Length = 430 Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 90/253 (35%), Positives = 142/253 (56%), Gaps = 6/253 (2%) Query: 1 VLRFLLGVAEAGFFPGVIYYFTQWLPNGERGKAMAIFLSGSALASILSGPISGALLQIEG 60 VLRFLLGVAEAGFFPGV+Y T W P R + + +F+ SA A+ + I G LL ++G Sbjct: 112 VLRFLLGVAEAGFFPGVLYVLTLWYPQAHRARMVGLFMIASAFANAVGAAIGGLLLGMDG 171 Query: 61 -GGLHXWQWMFIIEGLASVVLCGFVWFWLDSRPADAKWLTQSERDLIGNTIAAEQAEREK 119 GL WQW+F++ G +V+L +V + L S P+DA+WL E+ + +T+AAE+ Sbjct: 172 FLGLAGWQWVFLVTGAPAVLLAPYVLWRLPSGPSDARWLPDVEKSWLASTLAAERGGEVD 231 Query: 120 IKPAHISTWALLRDSQIVIFCFIYFSISLTIYGATFWLPSIIRKMGAYSDFQVGLFNSIP 179 H W + D ++++ +Y + L+ YG ++WLP+I++ G S+ G N IP Sbjct: 232 ---DHRGAWKAIFDPRVLMLAGLYIGMPLSAYGLSYWLPTIVKSFGV-SNTVNGFINVIP 287 Query: 180 WIISIIAMYLFASLAARFKFQQAWAAAALIIAAIGMYVST-FGGPVFAFVSICFAAVGFK 238 W++ +A++ AAR A +++AA+ + +S G F +C AA Sbjct: 288 WLLVAVALWFVPRHAARHGASAWHIAGPVLLAAVALSLSVILPGAALKFTMLCIAAPAIF 347 Query: 239 AASSLFWPIPQSY 251 AA +FW +P S+ Sbjct: 348 AAQPVFWSLPPSF 360 >yfaV [GEPR] COG0477 Permeases of the major facilitator superfamily Eco Escherichia coli K12 Length = 442 Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 89/250 (35%), Positives = 142/250 (56%), Gaps = 7/250 (2%) Query: 1 VLRFLLGVAEAGFFPGVIYYFTQWLPNGERGKAMAIFLSGSALASILSGPISGALLQIEG 60 ++R LL AEAGFFPG+IY +QW P R M +F G+ LA L P+SGALL++ G Sbjct: 122 IVRTLLRAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTLGSPLSGALLEMHG 181 Query: 61 -GGLHXWQWMFIIEGLASVVLCGFVWFWLDSRPADAKWLTQSERDLIGNTIAAEQAEREK 119 G W WMF+IEGL +V F +FWLD P A++L++ E+ L+ N +A+E+ ++ Sbjct: 182 FMGHPGWFWMFVIEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQLASEEQQKVT 241 Query: 120 IKPAHISTWALLRDSQIVIFCFIYFSISLTIYGATFWLPSIIRK-MGAYSDFQVGLFNSI 178 + + LR+ ++ IY +I + +YG F+LP+ + +G F + +I Sbjct: 242 SRLSDA-----LRNGRVWQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFTASVVTAI 296 Query: 179 PWIISIIAMYLFASLAARFKFQQAWAAAALIIAAIGMYVSTFGGPVFAFVSICFAAVGFK 238 PW+ ++ +L + + ++ AA L+ A IG+ +S PV A V++C AA+GF Sbjct: 297 PWVAALFGTWLIPRYSDKTGERRNVAALTLLAAGIGIGLSGLLSPVMAIVALCVAAIGFI 356 Query: 239 AASSLFWPIP 248 A +FW +P Sbjct: 357 AVQPVFWTMP 366