BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0232.p (207 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2156 [S] COG1561 Uncharacterized stress-induced protein Rso R... 254 8e-68 PM1875 [S] COG1561 Uncharacterized stress-induced protein Pmu Pa... 144 9e-35 HI0467 [S] COG1561 Uncharacterized stress-induced protein Hin Ha... 144 1e-34 YPO0043 [S] COG1561 Uncharacterized stress-induced protein Ype Y... 144 2e-34 XF1504 [S] COG1561 Uncharacterized stress-induced protein Xfa Xy... 144 2e-34 >RSc2156 [S] COG1561 Uncharacterized stress-induced protein Rso Ralstonia solanacearum Length = 311 Score = 254 bits (650), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 132/200 (66%), Positives = 158/200 (79%), Gaps = 1/200 (0%) Query: 8 APPLSVAELLRWPGVIEEAEIGQDTLQADVLATLQQTLTAFLDSRAREGAALQAVLETRI 67 A L + E+LRWPGV+ E E+ QD L+ V A ++ L L+SR REG AL+A+L R+ Sbjct: 113 AGSLRMGEVLRWPGVLAEPELTQDALREAVTAAAKEALQQLLESRRREGEALKAMLLERV 172 Query: 68 DAMEAIVARITPLVPQLVTQFQQKATERMQEALGLTSKDGAVASLPREEVLERIRQEVTL 127 DAM +IV + P+VP L+ Q Q K TER++EA GL + DG A L R+E+ ERIRQE T+ Sbjct: 173 DAMLSIVEDLVPMVPNLIQQHQDKLTERLREAFGLAAPDGTPA-LTRDELTERIRQEATV 231 Query: 128 YGIRIDIAEELARLSAHLAETRHILKKGGQVGKRLDFMMQELNREANTVGSKAAMKELAD 187 YGIRIDIAEEL+RL AHL ETRHIL+KGGQ+GKRLDFMMQELNREANT+GSKAA KELAD Sbjct: 232 YGIRIDIAEELSRLQAHLRETRHILEKGGQIGKRLDFMMQELNREANTLGSKAAAKELAD 291 Query: 188 ASMELKLLIDQMREQVQNLE 207 ASMELKLLI+QMREQVQNLE Sbjct: 292 ASMELKLLIEQMREQVQNLE 311 >PM1875 [S] COG1561 Uncharacterized stress-induced protein Pmu Pasteurella multocida Length = 287 Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 79/197 (40%), Positives = 124/197 (62%), Gaps = 13/197 (6%) Query: 11 LSVAELLRWPGVIEEAEIGQDTLQADVLATLQQTLTAFLDSRAREGAALQAVLETRIDAM 70 + + ++LR+PGV+E E D + +L+ LT F+ RAREG L +L+ R+DA+ Sbjct: 104 IHLNDVLRYPGVVEVPEQDLDLISQQLLSAFDSLLTEFIAMRAREGEKLNTLLQQRLDAV 163 Query: 71 EAIVARITPLVPQLVTQFQQKATERMQEALGLTSKDGAVASLPREEVLERIRQEVTLYGI 130 E ++ +P+++ + + +R E + P +R+ QE+ L Sbjct: 164 EVEANKVRSKMPEILQWQRDRLLQRFDEI--------QLQVDP-----QRVEQEMVLLAQ 210 Query: 131 RIDIAEELARLSAHLAETRHILKKGGQVGKRLDFMMQELNREANTVGSKAAMKELADASM 190 R+D+AEEL RL H+ ET+ IL+KGG VG++LDFMMQELNRE+NT+ SK+ E+ ++++ Sbjct: 211 RVDVAEELDRLQLHVKETKAILQKGGAVGRKLDFMMQELNRESNTLASKSISTEVTNSAV 270 Query: 191 ELKLLIDQMREQVQNLE 207 ELK+LI+QMREQ+QNLE Sbjct: 271 ELKVLIEQMREQIQNLE 287 >HI0467 [S] COG1561 Uncharacterized stress-induced protein Hin Haemophilus influenzae Length = 287 Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 78/198 (39%), Positives = 124/198 (62%), Gaps = 15/198 (7%) Query: 11 LSVAELLRWPGVIEEAEIGQDTLQADVLATLQQTLTAFLDSRAREGAALQAVLETRIDAM 70 +++ ++LR+PGV+E E D + D+L LT F+ R REG L +++ R+D++ Sbjct: 104 INLTDVLRYPGVVEAQEQDLDAISQDLLTAFDDLLTDFIAMRGREGEKLNDIIQQRLDSI 163 Query: 71 EAIVARITPLVPQLVTQFQQKATERMQEA-LGLTSKDGAVASLPREEVLERIRQEVTLYG 129 ++ +P ++ +++ +R ++A L L +R+ QE+ L Sbjct: 164 AVETDKVRSQMPAVLQWQRERLLQRFEDAQLNLDP--------------QRVEQEMILLA 209 Query: 130 IRIDIAEELARLSAHLAETRHILKKGGQVGKRLDFMMQELNREANTVGSKAAMKELADAS 189 RID+AEEL RL H+ ET +ILKKGG VG++LDFMMQELNRE+NT+ SK+ ++ ++ Sbjct: 210 QRIDVAEELDRLQMHVKETTNILKKGGAVGRKLDFMMQELNRESNTLASKSINADITASA 269 Query: 190 MELKLLIDQMREQVQNLE 207 +ELK+LI+QMREQ+QNLE Sbjct: 270 VELKVLIEQMREQIQNLE 287 >YPO0043 [S] COG1561 Uncharacterized stress-induced protein Ype Yersinia pestis Length = 287 Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 79/202 (39%), Positives = 126/202 (62%), Gaps = 15/202 (7%) Query: 7 DAPPLSVAELLRWPGVIEEAEIGQDTLQADVLATLQQTLTAFLDSRAREGAALQAVLETR 66 D ++ ++LRWPGV+ E D + +++ L L F+ SR EGAAL+ ++E R Sbjct: 100 DEGEINPVDILRWPGVMSAEEQDLDAISTELMQALDTALDDFIVSRETEGAALKTLIEQR 159 Query: 67 IDAMEAIVARITPLVPQLVTQFQQKATERMQEA-LGLTSKDGAVASLPREEVLERIRQEV 125 ++ + A V ++ +P ++ +++ +++EA + L + R+ QE+ Sbjct: 160 LEGVSAEVVKVRAHMPNILQWQRERLLNKLEEAQVQLENT--------------RLEQEL 205 Query: 126 TLYGIRIDIAEELARLSAHLAETRHILKKGGQVGKRLDFMMQELNREANTVGSKAAMKEL 185 L RID+AEEL RL AH+ ET +ILKK VG+RLDFMMQE NRE+NT+ SK+ E+ Sbjct: 206 VLMAQRIDVAEELDRLEAHVKETYNILKKKEAVGRRLDFMMQEFNRESNTLASKSINAEV 265 Query: 186 ADASMELKLLIDQMREQVQNLE 207 ++++ELK+LI+QMREQ+QN+E Sbjct: 266 TNSAIELKVLIEQMREQIQNIE 287 >XF1504 [S] COG1561 Uncharacterized stress-induced protein Xfa Xylella fastidiosa 9a5c Length = 300 Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 88/207 (42%), Positives = 125/207 (60%), Gaps = 18/207 (8%) Query: 3 AQFIDAPPLSV--AELLRWPGVIEEAEIGQDTLQADVLATLQQTLTAFLDSRAREGAALQ 60 AQF P L V AELL+ PGV++ +I TLQ +A L + L F+ +R REG +Q Sbjct: 110 AQF---PALRVTFAELLQIPGVLKGEQIDMATLQGHAVALLDKVLNNFIATREREGLKMQ 166 Query: 61 AVLETRIDAMEAIVARITPLVPQLVTQFQQKATERMQEALGLTSKDGAVASLPREEVLER 120 A++ R A+E IV + L+P + K + RM L G R Sbjct: 167 AMIAQRASAIERIVGEVRILIPTIREGQHNKLSARMNH-LSYPVDPG------------R 213 Query: 121 IRQEVTLYGIRIDIAEELARLSAHLAETRHILKKGGQVGKRLDFMMQELNREANTVGSKA 180 I QE+ L+ ++D+ EEL RLS+H++E IL++ VG+RLDF+MQE NREANT+GSK+ Sbjct: 214 IEQELVLWLQKLDVDEELDRLSSHISELHRILQQREPVGRRLDFLMQEFNREANTLGSKS 273 Query: 181 AMKELADASMELKLLIDQMREQVQNLE 207 ++A++ELK+LIDQ+REQVQN+E Sbjct: 274 VDSRTSNATIELKVLIDQIREQVQNIE 300