BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0216.p         (269 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0106 [P] COG0725 ABC-type molybdate transport system, peripla...   225   1e-58
MA2280 [P] COG0725 ABC-type molybdate transport system, periplas...   158   1e-38
MA1237 [P] COG0725 ABC-type molybdate transport system, periplas...   158   1e-38
sll0738 [P] COG0725 ABC-type molybdate transport system, peripla...   112   1e-24
BH3329 [P] COG0725 ABC-type molybdate transport system, periplas...   110   3e-24

>RSp0106 [P] COG0725 ABC-type molybdate transport system, periplasmic
           component Rso Ralstonia solanacearum
          Length = 257

 Score =  225 bits (573), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 107/160 (66%), Positives = 133/160 (83%)

Query: 5   AHATDLVVSAAASLTNAFKDLGAAFEQQNPGVKVINNFGASDILMQQIVRGAPADVFASA 64
           A A +LVVSAAASLTNAFK L  ++E Q+P  +V+ NFGASD+LMQQIVRGAPADVFASA
Sbjct: 27  AQAAELVVSAAASLTNAFKTLAQSYEAQHPDTRVVLNFGASDVLMQQIVRGAPADVFASA 86

Query: 65  DQTAMDKAIAEKAVQASTRKNFAANQIVLIVPGDSTLPLASLKDLTQPAVKKVALGNPAS 124
           DQ AMDKA++EK +Q+ +R++F ANQ+VLIVP  S +P+ +L DL +P V++VA+GNPAS
Sbjct: 87  DQEAMDKAVSEKVIQSGSRRDFVANQLVLIVPSASAVPVHALGDLARPEVQRVAIGNPAS 146

Query: 125 VPFGRYTKTALESAGLWDAILAKGVMAQNVRQSLDYVARG 164
           VP GRY K ALE+AGLW  + AK V+AQNVRQ+LDYVARG
Sbjct: 147 VPVGRYAKRALEAAGLWQPVSAKAVLAQNVRQALDYVARG 186


>MA2280 [P] COG0725 ABC-type molybdate transport system, periplasmic
           component Mac Methanosarcina acetivorans str.C2A
          Length = 274

 Score =  158 bits (399), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 78/164 (47%), Positives = 109/164 (66%), Gaps = 1/164 (0%)

Query: 2   ATPAHATD-LVVSAAASLTNAFKDLGAAFEQQNPGVKVINNFGASDILMQQIVRGAPADV 60
           A P   ++ ++VSAAASLT  F D+ + FE +NP V V  NF  S  L  QI  GAP DV
Sbjct: 39  AVPEQESETILVSAAASLTEVFTDMESQFETENPDVDVNFNFAGSGSLRTQIEGGAPVDV 98

Query: 61  FASADQTAMDKAIAEKAVQASTRKNFAANQIVLIVPGDSTLPLASLKDLTQPAVKKVALG 120
           FASA Q+ MD    E  ++ S+R++FA N +VLIVP  STL ++ ++DLT P V+++A+G
Sbjct: 99  FASASQSHMDILAGEGLIENSSREDFAQNSLVLIVPSSSTLNISGIEDLTSPEVERIAIG 158

Query: 121 NPASVPFGRYTKTALESAGLWDAILAKGVMAQNVRQSLDYVARG 164
           NP + P G+YT  +L  AG+WD +  K V+A++V+Q L YV RG
Sbjct: 159 NPETAPVGKYTTQSLTEAGIWDQLEGKTVLAEDVKQVLVYVERG 202


>MA1237 [P] COG0725 ABC-type molybdate transport system, periplasmic
           component Mac Methanosarcina acetivorans str.C2A
          Length = 276

 Score =  158 bits (399), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/185 (43%), Positives = 115/185 (62%), Gaps = 1/185 (0%)

Query: 2   ATPAHATD-LVVSAAASLTNAFKDLGAAFEQQNPGVKVINNFGASDILMQQIVRGAPADV 60
           A P   ++ ++VSAAASLT  F D+ + FE +NPGV V  NF  S  L  QI  GAP DV
Sbjct: 39  AVPGQESETILVSAAASLTEVFTDMESQFETENPGVDVNFNFAGSGSLRTQIEGGAPVDV 98

Query: 61  FASADQTAMDKAIAEKAVQASTRKNFAANQIVLIVPGDSTLPLASLKDLTQPAVKKVALG 120
           FASA Q+ MD    E  ++ S+R++FA N +VLIVP  STL ++ ++DLT   V+++A+G
Sbjct: 99  FASASQSHMDILAGEGLIENSSREDFAQNSLVLIVPSSSTLNISGIEDLTSLEVERIAIG 158

Query: 121 NPASVPFGRYTKTALESAGLWDAILAKGVMAQNVRQSLDYVARGFRHRCRRHAGQGQGRD 180
           NP + P G+YT  +L  AG+WD +  K V+A++V+Q L YV RG       +    +  +
Sbjct: 159 NPETAPVGKYTTQSLTEAGIWDQLEGKTVLAEDVKQVLVYVERGEVDAGFVYMTDAKTAE 218

Query: 181 PHSIR 185
           P +I 
Sbjct: 219 PETIE 223


>sll0738 [P] COG0725 ABC-type molybdate transport system, periplasmic
           component Syn Synechocystis
          Length = 270

 Score =  112 bits (280), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/153 (40%), Positives = 89/153 (58%)

Query: 6   HATDLVVSAAASLTNAFKDLGAAFEQQNPGVKVINNFGASDILMQQIVRGAPADVFASAD 65
            +  L VSAAASL +A + L   FE  +P ++V  NF AS  L QQI +GA  D+F SA 
Sbjct: 39  ESITLTVSAAASLQDALETLDPRFESTHPNIEVNYNFAASGTLQQQIEQGARVDLFISAA 98

Query: 66  QTAMDKAIAEKAVQASTRKNFAANQIVLIVPGDSTLPLASLKDLTQPAVKKVALGNPASV 125
              MD   A+  +   TR+N  +N +VL+VP DS L ++  + LT PAVK+++LG P SV
Sbjct: 99  SKQMDGLQAKSLIINDTRRNLLSNSLVLVVPQDSALQISKFQQLTDPAVKRISLGEPRSV 158

Query: 126 PFGRYTKTALESAGLWDAILAKGVMAQNVRQSL 158
           P G+Y +   E+  +   + +K V   +VR  L
Sbjct: 159 PAGQYAEEVFENLDILAQLQSKFVYGNSVRNVL 191


>BH3329 [P] COG0725 ABC-type molybdate transport system, periplasmic
           component Bha Bacillus halodurans
          Length = 260

 Score =  110 bits (276), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 98/159 (61%), Gaps = 15/159 (9%)

Query: 10  LVVSAAASLTNAFKDLGAAFEQQNPGVKVINNFGASDILMQQIVRGAPADVFASA--DQT 67
           + VSAAASLT+A  ++   FE  +P V+V+ NFG+S  L QQI++GAP D+F SA  D+ 
Sbjct: 39  ITVSAAASLTDALAEIKDVFEGAHPQVEVVYNFGSSGSLQQQIIQGAPVDLFFSAAEDKF 98

Query: 68  A--MDKAIAEKAVQASTRKNFAANQIVLIVPGDSTLPLASLKDLTQPAVKKVALGNPASV 125
           A  +D+ +  + V      N   NQ+VLI  G+    L S++DL +  V  VA+G P +V
Sbjct: 99  AELLDRGLVTEYV------NVVGNQLVLITSGNH---LNSIEDLHR--VGTVAIGTPETV 147

Query: 126 PFGRYTKTALESAGLWDAILAKGVMAQNVRQSLDYVARG 164
           P G Y K  L++AG+W+ +  + V AQ+VRQ L YV  G
Sbjct: 148 PAGMYAKEWLQAAGVWEELENQLVFAQDVRQVLTYVETG 186