BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0181.p         (186 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2149 [Q] COG3509 Poly(3-hydroxybutyrate) depolymerase Rso Ral...   107   1e-23

>RSc2149 [Q] COG3509 Poly(3-hydroxybutyrate) depolymerase Rso Ralstonia
           solanacearum
          Length = 343

 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 91/179 (50%), Gaps = 17/179 (9%)

Query: 8   AAMAQILALTHPQLIAAVGMHSAPLFGVSRSAVGAYGVMQHGSTQALAPIDKL--LAKTP 65
           A +A ++AL HP L AA+ +HS P+ GV+R+A  A  +M+ G+   + P++ L  +  T 
Sbjct: 174 AGLAGLMALRHPHLFAALALHSGPVLGVARTAASALNLMRRGAR--IDPVEALATMVDTG 231

Query: 66  GFPGMPAILITGDDDKIVRPINQLQLAGQFLRLNHAATQAPLAPLPPVTKDFGRTSKQFP 125
            +PG+P +L+ G  D+ V P+NQ QLA QF  LNH               D     ++  
Sbjct: 232 TYPGIPTLLLHGLRDEAVSPVNQAQLATQFRALNHLC-------------DAADVRRETT 278

Query: 126 RKNSMTVRDFATGSKVLVRSVHIARLGHAWSGGDDALPFNAKGPDAGKLMLAFFSRHRR 184
           R +   +R        L+ +      GHAWSGGD    F+A GPDA  L   F  +H R
Sbjct: 279 RGDGYVLRSDLRDDACLLATCQFTSTGHAWSGGDPRYAFHAAGPDATWLWWQFARQHAR 337