BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0156.p (231 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1118 [V] COG1136 ABC-type antimicrobial peptide transport sys... 291 1e-78 PA2987 [V] COG1136 ABC-type antimicrobial peptide transport syst... 277 1e-74 YPO1627 [V] COG1136 ABC-type antimicrobial peptide transport sys... 254 1e-67 NMB1234 [V] COG1136 ABC-type antimicrobial peptide transport sys... 251 9e-67 NMA1402 [V] COG1136 ABC-type antimicrobial peptide transport sys... 250 2e-66 >RSc1118 [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component Rso Ralstonia solanacearum Length = 244 Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 148/222 (66%), Positives = 173/222 (77%) Query: 5 DQAVLSCRGLGKTFMQGKYSVKVLNGVDIDVKPGEQVAIVGVSGSGKSTLLHLLGGLDTP 64 D AVL +GL K F QG +V VL GVDI + GE+VAIVG SGSGKSTLLH+LGGLD P Sbjct: 19 DTAVLQAQGLVKAFRQGGLNVDVLRGVDIRIGVGEKVAIVGASGSGKSTLLHVLGGLDVP 78 Query: 65 SAGSVTLMGKDFANLGETARGDLRNAALGFVYQFHHLLPEFSALDNVAMPLMIRRVKRDQ 124 ++G V+L+GK F + E R LRN ALGFVYQFHHLLPEF+ALDNVAMPL IR Q Sbjct: 79 TSGRVSLLGKPFTAMSERERNTLRNRALGFVYQFHHLLPEFTALDNVAMPLRIRGENEAQ 138 Query: 125 AQEQARTILARVGLENRVRHVPGELSGGERQRVALARALVTNPACVLADEPTGNLDRSTA 184 A+ A+ +LARVGL R H PGELSGGERQRVA+ARALV +PACVLADEPTGNLD TA Sbjct: 139 ARHTAQAMLARVGLGERTAHRPGELSGGERQRVAIARALVGSPACVLADEPTGNLDDHTA 198 Query: 185 DKTFELMIELSQTLGTAFVIVTHDIELARRCGRVLRLSENGL 226 + F+LM+EL++TLGT+FVIVTHDI+LA RC R+LRL + L Sbjct: 199 GEVFDLMLELTRTLGTSFVIVTHDIDLAGRCDRILRLRDGHL 240 >PA2987 [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component Pae Pseudomonas aeruginosa Length = 227 Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 139/224 (62%), Positives = 179/224 (79%) Query: 4 HDQAVLSCRGLGKTFMQGKYSVKVLNGVDIDVKPGEQVAIVGVSGSGKSTLLHLLGGLDT 63 +D++VLSCR L K++ +G SV+VL+GV++++ PGE+VAIVG SGSGKSTLL++LGGLDT Sbjct: 2 NDKSVLSCRNLSKSYDEGPQSVQVLSGVELNLLPGERVAIVGSSGSGKSTLLNMLGGLDT 61 Query: 64 PSAGSVTLMGKDFANLGETARGDLRNAALGFVYQFHHLLPEFSALDNVAMPLMIRRVKRD 123 PSAGSV L G++ + L ETARG LRN ALGFVYQFHHLLPEF+AL+NV MPL+I R Sbjct: 62 PSAGSVWLAGEELSALNETARGLLRNRALGFVYQFHHLLPEFTALENVCMPLLIGRTPIA 121 Query: 124 QAQEQARTILARVGLENRVRHVPGELSGGERQRVALARALVTNPACVLADEPTGNLDRST 183 +A+++A +L RVGL +R+ H P ELSGGERQRVA+ARALV P VL DEPTGNLD+ T Sbjct: 122 EARQRAAELLERVGLGHRLSHKPAELSGGERQRVAIARALVNRPQLVLLDEPTGNLDQHT 181 Query: 184 ADKTFELMIELSQTLGTAFVIVTHDIELARRCGRVLRLSENGLL 227 A ELM+ELS++L T+F++VTHD++LA R+LRL E L+ Sbjct: 182 AQGIQELMLELSRSLQTSFLVVTHDLQLAGHMDRILRLEEGRLI 225 >YPO1627 [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component Ype Yersinia pestis Length = 234 Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 124/222 (55%), Positives = 160/222 (72%) Query: 5 DQAVLSCRGLGKTFMQGKYSVKVLNGVDIDVKPGEQVAIVGVSGSGKSTLLHLLGGLDTP 64 + +L C L K + +G+ VL V ++PGE +AIVG SGSGKSTLLHLLGGLD+P Sbjct: 3 NHPLLQCINLCKRYQEGQLHTDVLRNVSFAIEPGELMAIVGSSGSGKSTLLHLLGGLDSP 62 Query: 65 SAGSVTLMGKDFANLGETARGDLRNAALGFVYQFHHLLPEFSALDNVAMPLMIRRVKRDQ 124 ++G V G+ L TA+ +LRN LGF+YQFHHLLP+F+AL+NVAMPL+I K + Sbjct: 63 TSGEVIYQGRSLNQLSSTAKAELRNRELGFIYQFHHLLPDFTALENVAMPLLIGGSKPAE 122 Query: 125 AQEQARTILARVGLENRVRHVPGELSGGERQRVALARALVTNPACVLADEPTGNLDRSTA 184 AQE+A +LA VGLE R +H P ELSGGERQRVA+AR+LV NP+ VLADEPTGNLD+ A Sbjct: 123 AQEKAHEMLAAVGLEKRSKHRPSELSGGERQRVAIARSLVNNPSLVLADEPTGNLDQRNA 182 Query: 185 DKTFELMIELSQTLGTAFVIVTHDIELARRCGRVLRLSENGL 226 D F L+ EL+ GTAF++VTHD++LA+R R L + + L Sbjct: 183 DSIFNLLGELNVRQGTAFLVVTHDLQLAKRMSRQLEMRDGQL 224 >NMB1234 [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component Nme Neisseria meningitidis MC58 Length = 231 Score = 251 bits (641), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 127/223 (56%), Positives = 160/223 (71%) Query: 6 QAVLSCRGLGKTFMQGKYSVKVLNGVDIDVKPGEQVAIVGVSGSGKSTLLHLLGGLDTPS 65 + +L C G+GK + G V+VL+G+D+++ GE I+G SGSGKSTLLH+LGGLD PS Sbjct: 3 ELILKCEGVGKRYRDGGLDVRVLHGLDLEIHAGESTGIIGSSGSGKSTLLHILGGLDMPS 62 Query: 66 AGSVTLMGKDFANLGETARGDLRNAALGFVYQFHHLLPEFSALDNVAMPLMIRRVKRDQA 125 G V LMG+D L + GDLRN LGFVYQFHHLLPEFSAL+NV MPL+I + R++A Sbjct: 63 EGRVLLMGEDLRTLNQRRLGDLRNRHLGFVYQFHHLLPEFSALENVMMPLLIGKKSREEA 122 Query: 126 QEQARTILARVGLENRVRHVPGELSGGERQRVALARALVTNPACVLADEPTGNLDRSTAD 185 E A +L +VGL++R H GELSGGERQR A+ARALVT P C+LADEPTGNLDR+ A Sbjct: 123 AEAAMAMLEKVGLKHRSTHRAGELSGGERQRAAIARALVTQPKCLLADEPTGNLDRANAR 182 Query: 186 KTFELMIELSQTLGTAFVIVTHDIELARRCGRVLRLSENGLLP 228 ++M+EL LGT V+VTHD ELA R RV+ + + L P Sbjct: 183 NVLDMMLELKTELGTGLVVVTHDDELAGRFERVMVMKDGSLHP 225 >NMA1402 [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component NmA Neisseria meningitidis Z2491 Length = 231 Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 127/223 (56%), Positives = 160/223 (71%) Query: 6 QAVLSCRGLGKTFMQGKYSVKVLNGVDIDVKPGEQVAIVGVSGSGKSTLLHLLGGLDTPS 65 + +L C G+GK + G V VL+G+D++++ GE I+G SGSGKSTLLH+LGGLD PS Sbjct: 3 ELILKCEGVGKRYRDGGLDVLVLHGLDLEIRAGESTGIIGSSGSGKSTLLHILGGLDMPS 62 Query: 66 AGSVTLMGKDFANLGETARGDLRNAALGFVYQFHHLLPEFSALDNVAMPLMIRRVKRDQA 125 G V LMG+D L + GDLRN LGFVYQFHHLLPEFSAL+NV MPL+I + R++A Sbjct: 63 EGRVLLMGEDLRTLNQRRLGDLRNRHLGFVYQFHHLLPEFSALENVMMPLLIGKKSREEA 122 Query: 126 QEQARTILARVGLENRVRHVPGELSGGERQRVALARALVTNPACVLADEPTGNLDRSTAD 185 E A +L +VGL++R H GELSGGERQR A+ARALVT P C+LADEPTGNLDR+ A Sbjct: 123 AEAAMAMLEKVGLKHRSTHRAGELSGGERQRAAIARALVTQPKCLLADEPTGNLDRANAR 182 Query: 186 KTFELMIELSQTLGTAFVIVTHDIELARRCGRVLRLSENGLLP 228 ++M+EL LGT V+VTHD ELA R RV+ + + L P Sbjct: 183 NVLDMMLELKTELGTGLVVVTHDDELAGRFERVMVMKDGSLHP 225