BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0155.p (281 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1117 [M] COG4591 ABC-type transport system, involved in lipop... 360 2e-99 XF1076 [M] COG4591 ABC-type transport system, involved in lipopr... 250 3e-66 NMA1403 [M] COG4591 ABC-type transport system, involved in lipop... 241 1e-63 PA2988 [M] COG4591 ABC-type transport system, involved in lipopr... 241 1e-63 NMB1235 [M] COG4591 ABC-type transport system, involved in lipop... 239 5e-63 >RSc1117 [M] COG4591 ABC-type transport system, involved in lipoprotein release, permease component Rso Ralstonia solanacearum Length = 416 Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 179/258 (69%), Positives = 206/258 (79%) Query: 24 GRRARPQEQADRTVKQFTVVGIXPLPRLKQFTVVGIFEAGHYEFDSSLAFIQIEDAERLF 83 G R ++ Q T+ LPRLKQFTV+G FE+GHYEFDSSLA I +EDAERLF Sbjct: 159 GLGVRQGDKVTLVAPQGTITPAGVLPRLKQFTVIGTFESGHYEFDSSLALINMEDAERLF 218 Query: 84 RLDAPSGVRLRIKDMLQAPQVTQELSTQLTGNLYLRDWSQQNSNWFAAVKTEKRMMFIIL 143 RL P+GVRL++ DM +APQV + LS LTG LY+RDWS+QN NWFAAV+TEK+MMFIIL Sbjct: 219 RLTGPTGVRLKLVDMQRAPQVAEALSRTLTGELYIRDWSRQNKNWFAAVQTEKKMMFIIL 278 Query: 144 TLIIAVAAFNLVSTLVMTVTDKQADIAILRTLGASPGSIMKIFVIQGALVGLIGTALGVA 203 TLIIAVAAFNLVSTLVMTVTDKQADIAILRT+GA PGSIMKIF++QG +G IGT LGV Sbjct: 279 TLIIAVAAFNLVSTLVMTVTDKQADIAILRTMGAQPGSIMKIFIVQGVAIGFIGTLLGVL 338 Query: 204 FGVVVALNIDVIVPAIERLLHVQFLPKSIYVISELPSDLIWSDVWTIGAVAVVLAFLATL 263 FG ++A NIDVIVPAIE L VQFLPK IY ISELPSD +D+ TIG ++ VLA +ATL Sbjct: 339 FGTLIAYNIDVIVPAIEHLFGVQFLPKDIYFISELPSDPRVNDIATIGLISFVLASVATL 398 Query: 264 YPSWAAARVKPAEALRYE 281 YPSW A+RV PAEALRYE Sbjct: 399 YPSWHASRVNPAEALRYE 416 >XF1076 [M] COG4591 ABC-type transport system, involved in lipoprotein release, permease component Xfa Xylella fastidiosa 9a5c Length = 413 Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 120/243 (49%), Positives = 180/243 (74%), Gaps = 2/243 (0%) Query: 39 QFTVVGIXPLPRLKQFTVVGIFEAGHYEFDSSLAFIQIEDAERLFRLDAPSGVRLRIKDM 98 Q T VG +PR+K+FTV G+FE G+ E D LA + +ED +++ R+D +GVRL++ DM Sbjct: 173 QTTPVGT--MPRMKRFTVSGLFEVGYNEIDRGLAVVNMEDMQKVMRMDGVTGVRLKLHDM 230 Query: 99 LQAPQVTQELSTQLTGNLYLRDWSQQNSNWFAAVKTEKRMMFIILTLIIAVAAFNLVSTL 158 A V ++L+ +L G + DW+++N+N ++++K EK +M I+L+LIIA+ AFNLVS+ Sbjct: 231 DHAWDVARDLAVRLNGPYLVSDWTRENANLYSSLKMEKTVMGILLSLIIAMGAFNLVSSQ 290 Query: 159 VMTVTDKQADIAILRTLGASPGSIMKIFVIQGALVGLIGTALGVAFGVVVALNIDVIVPA 218 VM VTDKQADIAILRTLG SP +M++F++QG+L+G+IGT GV GVV+ N++ I+ Sbjct: 291 VMLVTDKQADIAILRTLGLSPAGVMRVFMVQGSLIGIIGTLSGVIGGVVLTWNLERILKL 350 Query: 219 IERLLHVQFLPKSIYVISELPSDLIWSDVWTIGAVAVVLAFLATLYPSWAAARVKPAEAL 278 IE ++ LP+ +Y I+ LP+D+ + DV I +A+V++F+ATLYP+W AAR++PAEAL Sbjct: 351 IESTFNITLLPEDVYYITGLPTDMQFPDVVVITLMALVMSFIATLYPAWRAARIQPAEAL 410 Query: 279 RYE 281 RYE Sbjct: 411 RYE 413 >NMA1403 [M] COG4591 ABC-type transport system, involved in lipoprotein release, permease component NmA Neisseria meningitidis Z2491 Length = 415 Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 127/236 (53%), Positives = 168/236 (71%), Gaps = 2/236 (0%) Query: 48 LPRLKQFTVVGIFEAGHYEFDSSLAFIQIEDAERLFRLDAP-SGVRLRIKDMLQAPQVTQ 106 +PRLKQFTVVG+ + G YE D+SLA I+DA L+RLD +G+RL++ D AP +T Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239 Query: 107 ELSTQLTGN-LYLRDWSQQNSNWFAAVKTEKRMMFIILTLIIAVAAFNLVSTLVMTVTDK 165 +L + + +++RDW+ N ++F AV+ EKRMMFIILTLIIAVAAFNLVS+LVM VT+K Sbjct: 240 KLIPEAQRDTVWVRDWTFSNRSYFEAVELEKRMMFIILTLIIAVAAFNLVSSLVMAVTEK 299 Query: 166 QADIAILRTLGASPGSIMKIFVIQGALVGLIGTALGVAFGVVVALNIDVIVPAIERLLHV 225 QADIAILRTLG SPG +MKIF++QGA G GT GV GV++ N+ +V E LL V Sbjct: 300 QADIAILRTLGLSPGGVMKIFMVQGAFSGFFGTLAGVVCGVLLGWNVGRVVAFFENLLGV 359 Query: 226 QFLPKSIYVISELPSDLIWSDVWTIGAVAVVLAFLATLYPSWAAARVKPAEALRYE 281 + +Y I LPSD+ DV I +++ L+F+ATLYPS A++ +PAEALRYE Sbjct: 360 HLINSQVYFIDYLPSDVDMGDVALIACISLGLSFVATLYPSRRASKTQPAEALRYE 415 >PA2988 [M] COG4591 ABC-type transport system, involved in lipoprotein release, permease component Pae Pseudomonas aeruginosa Length = 416 Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 122/237 (51%), Positives = 168/237 (70%), Gaps = 3/237 (1%) Query: 48 LPRLKQFTVVGIFEAGHYEFDSSLAFIQIEDAERL--FRLDAPSGVRLRIKDMLQAPQVT 105 PR+K+FTVVG F G E D L+ I +EDA RL ++ + G+RL++ D+ QAP+V Sbjct: 180 FPRMKRFTVVGTFRVGAGELDGGLSLIHLEDAARLQRWKTNQVQGLRLKLDDLFQAPRVA 239 Query: 106 QELSTQLTGN-LYLRDWSQQNSNWFAAVKTEKRMMFIILTLIIAVAAFNLVSTLVMTVTD 164 E++ LT N Y RDW++ + N + A++ EK M+ ++L LI+AVAAFN++STLVM VTD Sbjct: 240 WEIARTLTDNDFYARDWTRSHGNLYQAIRMEKTMIGLLLLLIVAVAAFNIISTLVMVVTD 299 Query: 165 KQADIAILRTLGASPGSIMKIFVIQGALVGLIGTALGVAFGVVVALNIDVIVPAIERLLH 224 K++DIAILRTLGA+PG IM F++QG ++G+IGT +G GVV ALN+ + A+E+LL Sbjct: 300 KKSDIAILRTLGATPGQIMATFMVQGTVIGVIGTLVGGVLGVVAALNVSAWISALEKLLG 359 Query: 225 VQFLPKSIYVISELPSDLIWSDVWTIGAVAVVLAFLATLYPSWAAARVKPAEALRYE 281 QFL +Y I LPS L+ DV + A+VL+F ATLYP+W AAR +PAEALRYE Sbjct: 360 HQFLASDVYFIDYLPSQLMLDDVVLVCGAALVLSFFATLYPAWRAARTQPAEALRYE 416 >NMB1235 [M] COG4591 ABC-type transport system, involved in lipoprotein release, permease component Nme Neisseria meningitidis MC58 Length = 415 Score = 239 bits (610), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 126/236 (53%), Positives = 166/236 (70%), Gaps = 2/236 (0%) Query: 48 LPRLKQFTVVGIFEAGHYEFDSSLAFIQIEDAERLFRLDAP-SGVRLRIKDMLQAPQVTQ 106 +PRLKQFTVVG+ + G YE D+SLA I+DA L+RLD +G+RL++ D AP +T Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239 Query: 107 ELSTQLTGN-LYLRDWSQQNSNWFAAVKTEKRMMFIILTLIIAVAAFNLVSTLVMTVTDK 165 L + + +++RDW+ N ++F AV+ EKRMMFIILTLIIAVAAFNLVS+LVM VT+K Sbjct: 240 TLIPEAQRDAVWVRDWTYSNRSYFEAVELEKRMMFIILTLIIAVAAFNLVSSLVMAVTEK 299 Query: 166 QADIAILRTLGASPGSIMKIFVIQGALVGLIGTALGVAFGVVVALNIDVIVPAIERLLHV 225 QADIAILRTLG SP +MKIF++QGA G GT GV GV++ N+ +V E LL V Sbjct: 300 QADIAILRTLGLSPAGVMKIFMVQGAFSGFFGTLAGVVCGVLLGWNVGRVVAFFENLLGV 359 Query: 226 QFLPKSIYVISELPSDLIWSDVWTIGAVAVVLAFLATLYPSWAAARVKPAEALRYE 281 + +Y I LPSD+ DV I +++ L+F+ATLYPS A++ +PAEALRYE Sbjct: 360 HLINSQVYFIDYLPSDVDMGDVALIACISLGLSFVATLYPSRRASKTQPAEALRYE 415