BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0106.p (475 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1170 [D] COG0037 Predicted ATPase of the PP-loop superfamily ... 248 2e-65 PA3638 [D] COG0037 Predicted ATPase of the PP-loop superfamily i... 206 7e-53 HI0404 [D] COG0037 Predicted ATPase of the PP-loop superfamily i... 204 4e-52 STM0236 [D] COG0037 Predicted ATPase of the PP-loop superfamily ... 201 4e-51 PM0289 [D] COG0037 Predicted ATPase of the PP-loop superfamily i... 194 4e-49 >RSc1170 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Rso Ralstonia solanacearum Length = 462 Score = 248 bits (634), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 182/423 (43%), Positives = 238/423 (56%), Gaps = 18/423 (4%) Query: 37 FPVIAVAYSGGLDSSVLLHLAAAFAREQGV--RLFAFHIHHGISANADQWQAHCRAQSER 94 P +AVA SGG DS+ LLH AA+ GV RL A HIHHG+ A+AD W+A C + Sbjct: 23 VPTVAVALSGGRDSAALLHAVAAWRDAAGVPVRLVALHIHHGLQADADAWEAACARMAAA 82 Query: 95 AGAEFDTRNVTLAIKDKSGVEEAARVARYQALGQLCREHGAGLLLTAHHLDDQAETVLLQ 154 GA F R V ++ G+EEAAR ARY AL LC E GA LLLTAHHLDDQAETVLLQ Sbjct: 83 VGAAFRVRRVRVSTDAGRGIEEAAREARYAALDALCAETGATLLLTAHHLDDQAETVLLQ 142 Query: 155 MLRGSGVAGISGMDSANKAAELLGDAGLLMARPLLGAARGELEQYAQQEQVPFVEDESNS 214 +LRG+G+ G+S M A + + + RP L RG++E YA+ + +VED SN Sbjct: 143 LLRGAGLDGLSAMPMARERR-------VTLLRPWLDVPRGDIEAYARAHALAWVEDPSNG 195 Query: 215 DTRYARNALRHKVMPVLAEFFPGFQERFARAAGHAQAAQRLLTVLASQDLAACLEGEYLN 274 D RYARNALR ++ +A FP ++ AR+A H A L+ +A DLA L Sbjct: 196 DARYARNALR-PLLAGMAGHFPAYRASLARSAAHLAEAAALIEEVAQTDLARIAPAGTLA 254 Query: 275 VSALRRLDPERIDNLLRYWLGLRGLRMPSSAWLFELRTQLIDAKYDAQLCVTHPDCHVRR 334 V+ L L R LR WL GLR SS L +LR QL+ A+ D CV P VRR Sbjct: 255 VAGLAALSGPRQRAALRAWLAGAGLRAVSSRRLEDLRAQLLGARADGAPCVRLPGAQVRR 314 Query: 335 YRDRVFL----TPRRPPFDENTGPQPF-IWRGE-DKLHFPQFSGSLFFDVSEV-GFDAAW 387 YR + ++ P P D F R E ++ + G+L F ++ G DA Sbjct: 315 YRGQAWIEAAGQPGAGPADCPIAVSRFDPARAEVQRVDVAAWGGALLFSPAQAEGIDARI 374 Query: 388 LREQSLSVCLRSGGERIRLAWNRPAKSLKYHFQNMDIPAWERPYLPLVFAQEQILYAAGI 447 L + LS+ R GGERI L P+++LK +Q IPAW R LPL++A E++++AAG+ Sbjct: 375 L-QAPLSLAARRGGERIVLRPGGPSRALKQAYQEAGIPAWARARLPLLYAGERLVFAAGL 433 Query: 448 GMD 450 G D Sbjct: 434 GPD 436 >PA3638 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Pae Pseudomonas aeruginosa Length = 442 Score = 206 bits (525), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 162/427 (37%), Positives = 215/427 (50%), Gaps = 48/427 (11%) Query: 42 VAYSGGLDSSVLLHLAAAFAREQGV-RLFAFHIHHGISANADQWQAHCRAQSERAGAEFD 100 VA+SGGLDS+VLLHL A AR + + L A H+HHG+ A AD W AHC+A G Sbjct: 25 VAFSGGLDSTVLLHLLAQLARSEALPALSALHVHHGLQAAADGWPAHCQAVCRSLGIPLR 84 Query: 101 TRNVTLAIKDKSGVEEAARVARYQALGQLCREHGAGLLLTAHHLDDQAETVLLQMLRGSG 160 V +A+ +E+AAR ARY+A E +LLTA HLDDQAET+L ++LRG+G Sbjct: 85 VERVQVAVG--GSIEQAARDARYRAFQANLGE--GQVLLTAQHLDDQAETLLFRLLRGAG 140 Query: 161 VAGISGMDSANKAAELLGDAGLLMARPLLGAARGELEQYAQQEQVPFVEDESNSDTRYAR 220 + G++ M A+ LG G + RPLLG +R ELE YAQ ++ +VED SN D R++R Sbjct: 141 LRGLAAM----PASRPLG--GGRLCRPLLGVSRAELEAYAQAHRLDWVEDPSNQDPRFSR 194 Query: 221 NALRHKVMPVLAEFFPGFQERFARAAGHAQAAQRLLTVLASQDLAACLEGEYLN------ 274 N LR ++MP LA +P AR A H + A+ LL LA+ DL AC + L+ Sbjct: 195 NYLRREIMPRLASHWPQAVAGMARCAAHLREAEDLLAELAAIDLRACRQPSELDWPDWLD 254 Query: 275 -----VSALRRLDPERIDNLLRYWLGLRGLRMPSS----AWLFELRTQLIDAKYDAQLCV 325 + LRRL R NLLR WLG + R+P S W L DA DA Sbjct: 255 LPRIALEPLRRLSAARQRNLLRAWLG-QLTRLPDSDHWAGW-----ESLRDAGDDADPIW 308 Query: 326 THPDCHVRRYRDRVFLTPRRPPFDENTGPQPFIW-RGEDKLHFPQFSGSLFFDVSEVGFD 384 +RR R++ P D PF+W R L P G Sbjct: 309 RLESGELRRGAGRIWWL----PADWRAAAGPFVWERPAHPLLLPGNGRLALLGEVPAG-- 362 Query: 385 AAWLREQSLSVCLRSGGERIRLAWNRPAKSLKYHFQNMDIPAWERPYLPLVFAQEQILYA 444 L V R GGE + LA R + LK +P++ R LPL+F +++L Sbjct: 363 -------PLRVDYRRGGEVLALA-GRGRRDLKRLLNEAGVPSFLRGRLPLLFRADELLAV 414 Query: 445 AGI-GMD 450 A I G+D Sbjct: 415 ANIPGLD 421 >HI0404 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Hin Haemophilus influenzae Length = 430 Score = 204 bits (519), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 137/418 (32%), Positives = 212/418 (50%), Gaps = 27/418 (6%) Query: 42 VAYSGGLDSSVLLHLAAAFAREQG----VRLFAFHIHHGISANADQWQAHCRAQSERAGA 97 +A SGGLDS+VLL L A ++Q + + A HIHHG+S NAD W HC+ ++ Sbjct: 21 IALSGGLDSTVLLSLFAKLCQKQPHLPPLSIRAIHIHHGLSPNADSWAKHCQDLCDQFQI 80 Query: 98 EFDTRNVTLAIKDKSGVEEAARVARYQALGQLCREHGAGLLLTAHHLDDQAETVLLQMLR 157 V + +G+E AR ARYQA+ + + +L+TAHHL+DQ ET L + R Sbjct: 81 PLIIERV--QVDKTNGIEAGAREARYQAIKKYLQTQE--MLVTAHHLNDQTETFFLALKR 136 Query: 158 GSGVAGISGMDSANKAAELLGDAGLLMARPLLGAARGELEQYAQQEQVPFVEDESNSDTR 217 GSG+ G+ M + G+ + RPLLG R +LE YAQ+E++ ++ DESN D R Sbjct: 137 GSGLKGLGAMQQQSVLF------GMPILRPLLGFTRTQLENYAQKEKLNWITDESNEDNR 190 Query: 218 YARNALRHKVMPVLAEFFPGFQERFARAAGHAQAAQRLLTVLASQDLAA-CLEGEYLNVS 276 Y RN LR++++P L E + F R+A H Q+L+ L S+ C + Sbjct: 191 YDRNFLRNEILPELRERWAHFDLAVQRSAQHCFEQQQLINDLLSEIFTEHCQIKNQFKLC 250 Query: 277 ALRRLDPERIDNLLRYWLGLRGLRMPSSAWLFELRTQLIDAKYDAQLCVTHPDCHVRRYR 336 R+ + LLR WL L MPS L +L +I AK +A + +RRY+ Sbjct: 251 QFRQYSLAKQTALLRMWLAENQLEMPSKRQLTQLINDVIFAKEEANPQFQLVNKVIRRYQ 310 Query: 337 DRVFLTPRRPPFDENTGPQPFIWRGEDKLHFPQFSGSLFFDVSEVGFDAAW------LRE 390 D ++LT PF + T + + ++ L+ P G+L +E W L + Sbjct: 311 DSLYLT---KPFSDLT--KCTLKLEQNTLNLPDDLGNLTVQENEHNLIFYWQDYSVTLEK 365 Query: 391 QSLSVCLRSG-GERIRLAWNRPAKSLKYHFQNMDIPAWERPYLPLVFAQEQILYAAGI 447 +L + +R G +++ RP + +K +Q + +P WER +PL+F ++ A G Sbjct: 366 TNLPISIRFGYSGKVKHYPKRPREDIKKIWQELGVPPWERNRIPLIFYGNELKSAVGF 423 >STM0236 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Sty Salmonella typhimurium LT2 Length = 430 Score = 201 bits (510), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 148/410 (36%), Positives = 206/410 (50%), Gaps = 17/410 (4%) Query: 40 IAVAYSGGLDSSVLLH-LAAAFAREQGVRLFAFHIHHGISANADQWQAHCRAQSERAGAE 98 I A+SGGLDS+VLLH L R V L A HIHHG+S +AD W HC ER Sbjct: 16 ILAAFSGGLDSTVLLHQLVLWRERHPDVTLRAIHIHHGLSPHADSWVRHCETVCERWQVP 75 Query: 99 FDTRNVTLAIKDKSGVEEAARVARYQALGQLCREHGAGLLLTAHHLDDQAETVLLQMLRG 158 VTLA + G+E AR ARY+A Q +L TA HLDDQ ET LL + RG Sbjct: 76 LVVERVTLA-DNGLGIEAHAREARYRAFAQTLLP--GEVLATAQHLDDQCETFLLALKRG 132 Query: 159 SGVAGISGMDSANKAAELLGDAGLLMARPLLGAARGELEQYAQQEQVPFVEDESNSDTRY 218 SG AG+S M + A G L+ RPLL R LEQ+A + + ++EDESN D Y Sbjct: 133 SGPAGLSAMGERSPFA------GTLLLRPLLRETRKTLEQWAVRHGLCWIEDESNQDDAY 186 Query: 219 ARNALRHKVMPVLAEFFPGFQERFARAAGHAQAAQRLLTVLASQDLAACLEGE-YLNVSA 277 RN LR + +P+L + +P F AR+A +RLL L + DL C+ E L +S Sbjct: 187 DRNFLRLRALPLLQQRWPHFPAAVARSATLCAEQERLLDELLASDLTDCITAEGTLRLSP 246 Query: 278 LRRLDPERIDNLLRYWLGLRGLRMPSSAWLFELRTQLIDAKYDAQLCVTHPDCHVRRYRD 337 L + R +LR WL +R MPS L + ++ A+ DA C+ D +RRY+ Sbjct: 247 LMSMSDVRRAAILRRWLAMRNAPMPSRDALERIWQEVALARDDASPCLRFGDHEIRRYQS 306 Query: 338 RVFLTPRRPPFDENTGPQPFIWRGEDKLHFPQFSGSLFFDVSEVGFDAAWLREQSLSVCL 397 +++ E T P +W + L P G++ + G E+S+S+ Sbjct: 307 QLWWIKSVAGQHETTVAWP-VW--QTPLALPAGLGTV--QLVPGGELRRPREEESVSIRF 361 Query: 398 RSGGERIRLAWNRPAKSLKYHFQNMDIPAWERPYLPLVFAQEQILYAAGI 447 ++ G + + + LK +Q IP W R PL+F E ++ AAG+ Sbjct: 362 KAPGV-LHIVGRNGGRKLKKIWQEQGIPPWRRDTTPLLFYGETLIAAAGV 410 >PM0289 [D] COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control Pmu Pasteurella multocida Length = 431 Score = 194 bits (493), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 146/428 (34%), Positives = 203/428 (47%), Gaps = 46/428 (10%) Query: 42 VAYSGGLDSSVLLHLAAAFAREQ-GVRLFAFHIHHGISANADQWQAHCRAQSERAGAEFD 100 + +SGGLDS+ LL L A +Q + L A HIHHG+SANAD W HC+ ++ Sbjct: 22 IGFSGGLDSTALLLLFAKLREKQPHLMLRAIHIHHGLSANADAWVTHCQQICQQVAIPLI 81 Query: 101 TRNVTLAIKDKSGVEEAARVARYQALGQLCREH--GAGLLLTAHHLDDQAETVLLQMLRG 158 V I G+E AR ARYQA+ R+H + TAHH DQ ET L + RG Sbjct: 82 VEQV--KIDQHKGIEAGAREARYQAI----RQHLLPNEMFATAHHQQDQTETFFLALKRG 135 Query: 159 SGVAGISGMDSANKAAELLGDAGLLMARPLLGAARGELEQYAQQEQVPFVEDESNSDTRY 218 SG+AG+ M + L + RPLL R L Y +Q P+VEDESN+D+RY Sbjct: 136 SGLAGLGAMQRKSTLY------CLPICRPLLTFTRQMLLDYVKQAGCPWVEDESNTDSRY 189 Query: 219 ARNALRHKVMPVLAEFFPGFQERFARAAGHAQAAQRLLTVLASQDLAACLEG-------- 270 RN LRH+V+P L + +P F R+A H Q+LL L + A + Sbjct: 190 ERNFLRHEVLPRLRQRWPHFDNAVQRSAQHCFEQQQLLNELLHAEFAQHFDKTERTFQLR 249 Query: 271 EYLNVSALRRLDPERIDNLLRYWLGLRGLRMPSSAWLFELRTQLIDAKYDAQLCVTHPDC 330 ++ S L++ + LLR WL GL MPS L +L +I AK D+Q + Sbjct: 250 DFATRSQLKQ------NALLRLWLAQCGLSMPSKVQLTQLIQDVILAKSDSQPQFQLGEY 303 Query: 331 HVRRYRDRVFLTPRRPPFDENTGPQPFIWRGEDKLHFPQFSGSLFFDVSEVGFDAAW--- 387 VRRY+D ++LTP F + + + I GE L P G+L W Sbjct: 304 CVRRYQDTLYLTPH---FADLSSLRLPIHIGE-TLTLPDHLGTLSLQQQAGQLQVIWSHP 359 Query: 388 ---------LREQSLSVCLRSGGERIRLAWNRPAKSLKYHFQNMDIPAWERPYLPLVFAQ 438 L E + V R G ++RL+ K +K +Q +P W R +PL+F Sbjct: 360 QHTFTSILPLTEDPIEVRFRYSG-KVRLSPTSANKDIKKLWQQHAVPVWLRQRIPLIFYA 418 Query: 439 EQILYAAG 446 ++ A G Sbjct: 419 DRFKSAVG 426