BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0099.p         (162 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1164 [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamas...   219   2e-57
YPO3074 [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamas...   216   2e-56
ZppiB [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase)...   214   4e-56
ECs0587 [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamas...   214   4e-56
ppiB [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) ...   213   1e-55

>RSc1164 [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) -
           cyclophilin family Rso Ralstonia solanacearum
          Length = 179

 Score =  219 bits (559), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 107/164 (65%), Positives = 128/164 (78%), Gaps = 4/164 (2%)

Query: 3   VLFTTNHGTFTVELEAEKAPKTVENFLAYVNSGHYSGTIFHRVIDGFMIQGGGFEPG--M 60
           V   TNHG  T+ L+AEKAPK+V NF+ YV  GHY+GT+FHRVI GFMIQGGGFEPG  M
Sbjct: 15  VKLHTNHGDITLALDAEKAPKSVANFVHYVKKGHYNGTVFHRVIKGFMIQGGGFEPGADM 74

Query: 61  KQKPTNDPVENEAKNGLKNEPYTLAMARTSAPHSASAQFFVNVKNNSFLDF--PGQDGWG 118
           KQKPT+ P++NEA NGLKNE  ++AMART+ PHSA+AQFF+NV +N FL+   P   GWG
Sbjct: 75  KQKPTDAPIDNEANNGLKNERGSIAMARTNDPHSATAQFFINVVDNDFLNHTSPTPQGWG 134

Query: 119 YCVFGKVTEGTDVIDKIKNVKTTRSGMFADVPVEDVVIEKAEVV 162
           Y VFGKVTEG DV+DKI+ V+T   G   DVP+EDVVIE AEV+
Sbjct: 135 YAVFGKVTEGLDVVDKIRAVRTGNRGYHQDVPMEDVVIESAEVI 178


>YPO3074 [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) -
           cyclophilin family Ype Yersinia pestis
          Length = 164

 Score =  216 bits (550), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 104/161 (64%), Positives = 121/161 (75%), Gaps = 2/161 (1%)

Query: 3   VLFTTNHGTFTVELEAEKAPKTVENFLAYVNSGHYSGTIFHRVIDGFMIQGGGFEPGMKQ 62
           V F TNHG   +   A+KAP TVENFL Y   G Y  TIFHRVIDGFMIQGGGFEPGM Q
Sbjct: 2   VTFHTNHGDIVINTFADKAPATVENFLNYCRKGFYDNTIFHRVIDGFMIQGGGFEPGMSQ 61

Query: 63  KPTNDPVENEAKNGLKNEPYTLAMARTSAPHSASAQFFVNVKNNSFLDFPGQ--DGWGYC 120
           K T+ P++NEA NGLKN   TLAMART+ PHSA+AQFF+NV +N FL+F  +  DGWGYC
Sbjct: 62  KTTDAPIKNEANNGLKNTRGTLAMARTNDPHSATAQFFINVADNDFLNFRSERPDGWGYC 121

Query: 121 VFGKVTEGTDVIDKIKNVKTTRSGMFADVPVEDVVIEKAEV 161
           VF +VT+G DV+DKIKNV T RSGM  DVP EDV+I+   +
Sbjct: 122 VFAEVTDGLDVVDKIKNVATGRSGMHQDVPKEDVIIKSVTI 162


>ZppiB [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) -
           cyclophilin family EcZ Escherichia coli O157:H7 EDL933
          Length = 164

 Score =  214 bits (546), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 104/161 (64%), Positives = 122/161 (75%), Gaps = 2/161 (1%)

Query: 3   VLFTTNHGTFTVELEAEKAPKTVENFLAYVNSGHYSGTIFHRVIDGFMIQGGGFEPGMKQ 62
           V F TNHG   ++   +KAP+TV+NFL Y   G Y+ TIFHRVI+GFMIQGGGFEPGMKQ
Sbjct: 2   VTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQ 61

Query: 63  KPTNDPVENEAKNGLKNEPYTLAMARTSAPHSASAQFFVNVKNNSFLDFPGQ--DGWGYC 120
           K T +P++NEA NGLKN   TLAMART APHSA+AQFF+NV +N FL+F G+   GWGYC
Sbjct: 62  KATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYC 121

Query: 121 VFGKVTEGTDVIDKIKNVKTTRSGMFADVPVEDVVIEKAEV 161
           VF +V EG DV+DKIK V T RSGM  DVP EDV+IE   V
Sbjct: 122 VFAEVVEGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTV 162


>ECs0587 [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) -
           cyclophilin family Ecs Escherichia coli O157:H7
          Length = 164

 Score =  214 bits (546), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 104/161 (64%), Positives = 122/161 (75%), Gaps = 2/161 (1%)

Query: 3   VLFTTNHGTFTVELEAEKAPKTVENFLAYVNSGHYSGTIFHRVIDGFMIQGGGFEPGMKQ 62
           V F TNHG   ++   +KAP+TV+NFL Y   G Y+ TIFHRVI+GFMIQGGGFEPGMKQ
Sbjct: 2   VTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQ 61

Query: 63  KPTNDPVENEAKNGLKNEPYTLAMARTSAPHSASAQFFVNVKNNSFLDFPGQ--DGWGYC 120
           K T +P++NEA NGLKN   TLAMART APHSA+AQFF+NV +N FL+F G+   GWGYC
Sbjct: 62  KATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYC 121

Query: 121 VFGKVTEGTDVIDKIKNVKTTRSGMFADVPVEDVVIEKAEV 161
           VF +V EG DV+DKIK V T RSGM  DVP EDV+IE   V
Sbjct: 122 VFAEVVEGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTV 162


>ppiB [O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) -
           cyclophilin family Eco Escherichia coli K12
          Length = 164

 Score =  213 bits (543), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 103/161 (63%), Positives = 122/161 (75%), Gaps = 2/161 (1%)

Query: 3   VLFTTNHGTFTVELEAEKAPKTVENFLAYVNSGHYSGTIFHRVIDGFMIQGGGFEPGMKQ 62
           V F TNHG   ++   +KAP+TV+NFL Y   G Y+ TIFHRVI+GFMIQGGGFEPGMKQ
Sbjct: 2   VTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQ 61

Query: 63  KPTNDPVENEAKNGLKNEPYTLAMARTSAPHSASAQFFVNVKNNSFLDFPGQ--DGWGYC 120
           K T +P++NEA NGLKN   TLAMART APHSA+AQFF+NV +N FL+F G+   GWGYC
Sbjct: 62  KATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYC 121

Query: 121 VFGKVTEGTDVIDKIKNVKTTRSGMFADVPVEDVVIEKAEV 161
           VF +V +G DV+DKIK V T RSGM  DVP EDV+IE   V
Sbjct: 122 VFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTV 162