BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0080.p         (111 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1226 [F] COG0104 Adenylosuccinate synthase Rso Ralstonia sola...   165   3e-41
NMA1024 [F] COG0104 Adenylosuccinate synthase NmA Neisseria meni...   155   2e-38
NMB0815 [F] COG0104 Adenylosuccinate synthase Nme Neisseria meni...   150   6e-37
PA4938 [F] COG0104 Adenylosuccinate synthase Pae Pseudomonas aer...   146   1e-35
YPO0378 [F] COG0104 Adenylosuccinate synthase Ype Yersinia pestis     139   2e-33

>RSc1226 [F] COG0104 Adenylosuccinate synthase Rso Ralstonia solanacearum
          Length = 446

 Score =  165 bits (417), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 93/111 (83%)

Query: 1   VQINGVSGMCLTKLDVLDGLESLKLCTGYTLNGKTVDIFPVGAEEAAACVPIYEEMPGWK 60
           +QINGVSG+C+TKLDVLDGLE++KLC GY L+GK++DI P G++  A C P+YEE PGW 
Sbjct: 335 IQINGVSGLCMTKLDVLDGLETIKLCVGYMLDGKSIDILPRGSDAVARCQPVYEEFPGWN 394

Query: 61  ESTVGVQSLDGLPKNARAYIERIQELVGVPIDMISTGPDREETIVLRHPFK 111
            ST G++  D LP+ A+AY++R++E+ G+PI MISTGPDR+ETI+LRHP+K
Sbjct: 395 TSTFGLKEWDALPETAQAYLKRVEEVAGIPIAMISTGPDRDETILLRHPYK 445


>NMA1024 [F] COG0104 Adenylosuccinate synthase NmA Neisseria meningitidis
           Z2491
          Length = 432

 Score =  155 bits (393), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 88/111 (79%), Gaps = 1/111 (0%)

Query: 1   VQINGVSGMCLTKLDVLDGLESLKLCTGYTL-NGKTVDIFPVGAEEAAACVPIYEEMPGW 59
           +QING+SGMC+TKLDV+DG+E++ +C GY L +G   DI P G++   AC PIYE MPGW
Sbjct: 321 IQINGISGMCITKLDVMDGVETINICVGYELPDGGKTDILPCGSDAVEACKPIYETMPGW 380

Query: 60  KESTVGVQSLDGLPKNARAYIERIQELVGVPIDMISTGPDREETIVLRHPF 110
            EST GV+S D LP NA+AY++RI+E+ G P+ ++STGPDREETIVL HPF
Sbjct: 381 SESTFGVKSYDALPANAKAYLKRIEEVCGAPVAIVSTGPDREETIVLHHPF 431


>NMB0815 [F] COG0104 Adenylosuccinate synthase Nme Neisseria meningitidis
           MC58
          Length = 434

 Score =  150 bits (380), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 87/111 (78%), Gaps = 1/111 (0%)

Query: 1   VQINGVSGMCLTKLDVLDGLESLKLCTGYTL-NGKTVDIFPVGAEEAAACVPIYEEMPGW 59
           +QING+SGMC+TKLDV+DG+E++ +C GY L +G   DI P G++    C PIYE MPGW
Sbjct: 323 IQINGISGMCITKLDVMDGVETINICVGYELPDGGKTDILPCGSDAVETCKPIYETMPGW 382

Query: 60  KESTVGVQSLDGLPKNARAYIERIQELVGVPIDMISTGPDREETIVLRHPF 110
           +EST GV+    LP+NA+AY++RI+E+ G P+ ++STGPDREETIVL HPF
Sbjct: 383 RESTFGVKDYGALPENAKAYLKRIEEVCGAPVAIVSTGPDREETIVLHHPF 433


>PA4938 [F] COG0104 Adenylosuccinate synthase Pae Pseudomonas aeruginosa
          Length = 430

 Score =  146 bits (368), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 67/110 (60%), Positives = 84/110 (76%)

Query: 1   VQINGVSGMCLTKLDVLDGLESLKLCTGYTLNGKTVDIFPVGAEEAAACVPIYEEMPGWK 60
           ++IN +SG+CLTKLDVLDGL+ ++LC GY      V   P  A+      P+YEEMPGW 
Sbjct: 320 IEINSISGLCLTKLDVLDGLDVVRLCVGYKNADGDVLEAPTDADSYIGLQPVYEEMPGWS 379

Query: 61  ESTVGVQSLDGLPKNARAYIERIQELVGVPIDMISTGPDREETIVLRHPF 110
           ESTVG ++L+ LP NARAYI+R++ELVG PID+ISTGPDR ETI+LRHPF
Sbjct: 380 ESTVGAKTLEELPANARAYIKRVEELVGAPIDIISTGPDRNETIILRHPF 429


>YPO0378 [F] COG0104 Adenylosuccinate synthase Ype Yersinia pestis
          Length = 432

 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   VQINGVSGMCLTKLDVLDGLESLKLCTGYTL-NGKTVDIFPVGAEEAAACVPIYEEMPGW 59
           VQIN +SG C+TKLDVLDGL+ +KLC GY + +G+ VD  P+ AE      PIYE MPGW
Sbjct: 320 VQINSLSGFCMTKLDVLDGLKEVKLCVGYRMPDGREVDTTPLAAEGWEGIEPIYETMPGW 379

Query: 60  KESTVGVQSLDGLPKNARAYIERIQELVGVPIDMISTGPDREETIVLRHPF 110
            E+T GV+    LP+ A  YI+R++EL GVPID+ISTGPDR+ET++LR PF
Sbjct: 380 SETTFGVKEHSKLPQAALNYIQRVEELTGVPIDIISTGPDRDETMILRDPF 430