BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0079.p (328 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1226 [F] COG0104 Adenylosuccinate synthase Rso Ralstonia sola... 389 e-108 PA4938 [F] COG0104 Adenylosuccinate synthase Pae Pseudomonas aer... 353 2e-97 PM0938 [F] COG0104 Adenylosuccinate synthase Pmu Pasteurella mul... 340 3e-93 YPO0378 [F] COG0104 Adenylosuccinate synthase Ype Yersinia pestis 331 1e-90 HI1633 [F] COG0104 Adenylosuccinate synthase Hin Haemophilus inf... 331 2e-90 >RSc1226 [F] COG0104 Adenylosuccinate synthase Rso Ralstonia solanacearum Length = 446 Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust. Identities = 187/246 (76%), Positives = 209/246 (84%) Query: 5 SNAKNVVVIGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLVIGGKKTALQLIPSG 64 S +NVVVIGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTL+IGGKKT L+LIPSG Sbjct: 7 SQGRNVVVIGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLIIGGKKTILRLIPSG 66 Query: 65 IMRAGVACYIGNGVVLSVPDLLREIDKLEAAGVEVASRLKVSEACPLILPYHVALDVARE 124 IMR GVACYIGNGVVLS L +EID+LE+AGVEV SRL++SEA LILPYH+A+D ARE Sbjct: 67 IMRDGVACYIGNGVVLSPEALFKEIDELESAGVEVKSRLRISEATTLILPYHIAIDKARE 126 Query: 125 AARGAAKIGTTGKGIGPAYEDKVARRAIRVADLLNEKRFAEKLLENLDYHNFVLTQYLKT 184 RGAAKIGTTG+GIGPAYEDKVARRA+RV DL + FAE+L ENLD+HNFVLTQYL Sbjct: 127 IKRGAAKIGTTGRGIGPAYEDKVARRALRVQDLFDPAYFAERLRENLDFHNFVLTQYLNH 186 Query: 185 QPVDFQKTLDDALANVPRLKPMVADVSNDLHIANQNGSNLLFEGAQGSLLDVDHGTYPFV 244 +DFQ+TLD+ L RL PMV DVS +L AN G NL+FEGAQG+LLD+DHGTYPFV Sbjct: 187 PALDFQQTLDEMLPYGERLAPMVTDVSAELFAANAAGKNLMFEGAQGTLLDIDHGTYPFV 246 Query: 245 TSSNCV 250 TSSNCV Sbjct: 247 TSSNCV 252 >PA4938 [F] COG0104 Adenylosuccinate synthase Pae Pseudomonas aeruginosa Length = 430 Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 172/252 (68%), Positives = 198/252 (78%) Query: 7 AKNVVVIGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLVIGGKKTALQLIPSGIM 66 KNVVV+GTQWGDEGKGKIVD LT+ A VVR+QGGHNAGHTLVI G+KT L LIPSGI+ Sbjct: 2 GKNVVVLGTQWGDEGKGKIVDLLTEQAAAVVRYQGGHNAGHTLVIDGEKTVLHLIPSGIL 61 Query: 67 RAGVACYIGNGVVLSVPDLLREIDKLEAAGVEVASRLKVSEACPLILPYHVALDVAREAA 126 R GV C IGNGVVL+ LLREI KLE GV V RL++S +CPLIL YHVALD ARE A Sbjct: 62 REGVQCLIGNGVVLAPDALLREITKLEEKGVPVRERLRISPSCPLILSYHVALDQAREKA 121 Query: 127 RGAAKIGTTGKGIGPAYEDKVARRAIRVADLLNEKRFAEKLLENLDYHNFVLTQYLKTQP 186 RG AKIGTTG+GIGPAYEDKVARR +RV DL + +RFA KL E LDYHNFVL Y K Sbjct: 122 RGEAKIGTTGRGIGPAYEDKVARRGLRVGDLFHRERFAAKLGELLDYHNFVLQHYYKEPA 181 Query: 187 VDFQKTLDDALANVPRLKPMVADVSNDLHIANQNGSNLLFEGAQGSLLDVDHGTYPFVTS 246 +DFQKTLD+A+ LKPM+ADV+ LH ++G +++FEGAQGSLLD+DHGTYP+VTS Sbjct: 182 IDFQKTLDEAMEYAELLKPMMADVAATLHDLRKHGKDIMFEGAQGSLLDIDHGTYPYVTS 241 Query: 247 SNCVAGNAAAGA 258 SN AG A G+ Sbjct: 242 SNTTAGGTATGS 253 >PM0938 [F] COG0104 Adenylosuccinate synthase Pmu Pasteurella multocida Length = 432 Score = 340 bits (871), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 165/252 (65%), Positives = 195/252 (77%) Query: 7 AKNVVVIGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLVIGGKKTALQLIPSGIM 66 K+VV++G QWGDEGKGKIVD LTD + VVR+QGGHNAGHTL+I G+KT L+LIPSGI+ Sbjct: 2 GKSVVILGAQWGDEGKGKIVDLLTDRVKYVVRYQGGHNAGHTLIINGEKTVLRLIPSGIL 61 Query: 67 RAGVACYIGNGVVLSVPDLLREIDKLEAAGVEVASRLKVSEACPLILPYHVALDVAREAA 126 R V C IGNGVVLS L++E+ +LE+ G+ V RL +SEACPLILPYHVA+D AREAA Sbjct: 62 RENVTCLIGNGVVLSPAALMQEMGELESRGINVRERLLISEACPLILPYHVAMDHAREAA 121 Query: 127 RGAAKIGTTGKGIGPAYEDKVARRAIRVADLLNEKRFAEKLLENLDYHNFVLTQYLKTQP 186 G KIGTTG+GIGPAYEDKVARR +RV DL N + FAEKL LDY+NF L Y K + Sbjct: 122 LGKNKIGTTGRGIGPAYEDKVARRGLRVGDLFNREAFAEKLKTILDYYNFQLVNYYKAEA 181 Query: 187 VDFQKTLDDALANVPRLKPMVADVSNDLHIANQNGSNLLFEGAQGSLLDVDHGTYPFVTS 246 VDFQKTLDD +A + MVADV+ L A +NG N+LFEGAQG++LD+DHGTYPFVTS Sbjct: 182 VDFQKTLDDVMAVADIITGMVADVTTMLDKARKNGDNILFEGAQGTMLDIDHGTYPFVTS 241 Query: 247 SNCVAGNAAAGA 258 SN AG A GA Sbjct: 242 SNTTAGGVATGA 253 >YPO0378 [F] COG0104 Adenylosuccinate synthase Ype Yersinia pestis Length = 432 Score = 331 bits (849), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 171/280 (61%), Positives = 202/280 (72%), Gaps = 5/280 (1%) Query: 7 AKNVVVIGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLVIGGKKTALQLIPSGIM 66 KNVVV+GTQWGDEGKGK+VD LT+ A+ VVR+QGGHNAGHTLVI G+KT L LIPSGI+ Sbjct: 2 GKNVVVLGTQWGDEGKGKVVDLLTERAKYVVRYQGGHNAGHTLVINGEKTVLHLIPSGIL 61 Query: 67 RAGVACYIGNGVVLSVPDLLREIDKLEAAGVEVASRLKVSEACPLILPYHVALDVAREAA 126 R V IGNGVVL+ L++E+ +LEA GV V RL +SEACPLILPYHVALD ARE A Sbjct: 62 RENVISIIGNGVVLAPDALMKEMTELEARGVPVRERLLLSEACPLILPYHVALDNAREKA 121 Query: 127 RGAAKIGTTGKGIGPAYEDKVARRAIRVADLLNEKRFAEKLLENLDYHNFVLTQYLKTQP 186 RGA IGTTG+GIGPAYEDKVARR +RV+DL N++ FA KL E ++YHNF L Y K Sbjct: 122 RGAKAIGTTGRGIGPAYEDKVARRGLRVSDLFNKETFAIKLKEIVEYHNFQLVHYYKEAA 181 Query: 187 VDFQKTLDDALANVPRLKPMVADVSNDLHIANQNGSNLLFEGAQGSLLDVDHGTYPFVTS 246 VD+QK LDD LA L MV DVS L A + G ++FEGAQG+LLD+DHGTYP+VTS Sbjct: 182 VDYQKVLDDVLAIADILTAMVVDVSELLDNARKQGELIMFEGAQGTLLDIDHGTYPYVTS 241 Query: 247 SNCVAGNAAAGA---PXF--FLPVSVPTCCTMSWASPRPT 281 SN AG A G+ P + ++ V T A P PT Sbjct: 242 SNTTAGGVATGSGLGPRYVDYVLGIVKAYSTRVGAGPFPT 281 >HI1633 [F] COG0104 Adenylosuccinate synthase Hin Haemophilus influenzae Length = 432 Score = 331 bits (848), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 156/252 (61%), Positives = 196/252 (77%) Query: 7 AKNVVVIGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLVIGGKKTALQLIPSGIM 66 K+VV++G QWGDEGKGKIVD LTD + VVR+QGGHNAGHTL+I G+KT L+LIPSG++ Sbjct: 2 GKSVVILGAQWGDEGKGKIVDLLTDRVKYVVRYQGGHNAGHTLIINGEKTVLRLIPSGML 61 Query: 67 RAGVACYIGNGVVLSVPDLLREIDKLEAAGVEVASRLKVSEACPLILPYHVALDVAREAA 126 V C IGNGVV+S L++E+ +LE+ G++V RL +SEACPLILPYHVA+D AREAA Sbjct: 62 HPNVTCLIGNGVVVSPEALMKEMGELESRGIKVRERLLISEACPLILPYHVAMDHAREAA 121 Query: 127 RGAAKIGTTGKGIGPAYEDKVARRAIRVADLLNEKRFAEKLLENLDYHNFVLTQYLKTQP 186 G IGTTG+GIGPAYEDKVARR +RV DL N++ FAEKL L+Y+NF L Y K +P Sbjct: 122 LGKKAIGTTGRGIGPAYEDKVARRGLRVGDLFNKEAFAEKLKNILEYYNFQLVNYYKVEP 181 Query: 187 VDFQKTLDDALANVPRLKPMVADVSNDLHIANQNGSNLLFEGAQGSLLDVDHGTYPFVTS 246 VD+QKTLDD +A + MVAD++ L A +NG ++LFEGAQG++LD+DHGTYP+VTS Sbjct: 182 VDYQKTLDDVMAIADVITGMVADITTILDTARKNGEHILFEGAQGTMLDIDHGTYPYVTS 241 Query: 247 SNCVAGNAAAGA 258 SN AG A G+ Sbjct: 242 SNTTAGGVATGS 253