BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0059.p         (64 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA3623 [M] COG0739 Membrane proteins related to metalloendopepti...    91   8e-19
RSc1206 [M] COG0739 Membrane proteins related to metalloendopept...    89   2e-18
PM1614 [M] COG0739 Membrane proteins related to metalloendopepti...    89   3e-18
VC0533 [M] COG0739 Membrane proteins related to metalloendopepti...    86   2e-17
ygeR [M] COG0739 Membrane proteins related to metalloendopeptida...    85   4e-17

>PA3623 [M] COG0739 Membrane proteins related to metalloendopeptidases Pae
           Pseudomonas aeruginosa
          Length = 297

 Score = 90.5 bits (223), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 40/64 (62%), Positives = 51/64 (79%)

Query: 1   VKHSNNLLSAYAHNKTILVKEGQAVTKGQKIAEMGNSDSDSVKLHFEIRQQGKPVDPSKY 60
           +KH+   +SAY HN+ +LV+EGQ V  GQ IAEMG++ +D VKLHFEIR+QGKPVDP +Y
Sbjct: 234 IKHNETYVSAYGHNRRLLVREGQQVKVGQSIAEMGSTGTDRVKLHFEIRRQGKPVDPLQY 293

Query: 61  LPPR 64
           LP R
Sbjct: 294 LPRR 297


>RSc1206 [M] COG0739 Membrane proteins related to metalloendopeptidases Rso
           Ralstonia solanacearum
          Length = 268

 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 37/64 (57%), Positives = 51/64 (79%)

Query: 1   VKHSNNLLSAYAHNKTILVKEGQAVTKGQKIAEMGNSDSDSVKLHFEIRQQGKPVDPSKY 60
           +KH++  L+AY +N  +LV E   V KGQKIAEMG++D+D VKLHFE+R+ GKPVDP ++
Sbjct: 205 IKHNDTFLTAYGNNDKVLVTEQSTVKKGQKIAEMGSTDADRVKLHFEVRRNGKPVDPMRF 264

Query: 61  LPPR 64
           LPP+
Sbjct: 265 LPPQ 268


>PM1614 [M] COG0739 Membrane proteins related to metalloendopeptidases Pmu
           Pasteurella multocida
          Length = 467

 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 55/64 (85%)

Query: 1   VKHSNNLLSAYAHNKTILVKEGQAVTKGQKIAEMGNSDSDSVKLHFEIRQQGKPVDPSKY 60
           +KH+++ LSAYAHN++ILVK+ Q V  GQ+IA+MG+S ++SVKLHFEIR +GK VDP++Y
Sbjct: 404 IKHNDDYLSAYAHNESILVKDQQEVRAGQQIAKMGSSGTNSVKLHFEIRYKGKSVDPTRY 463

Query: 61  LPPR 64
           LP R
Sbjct: 464 LPKR 467


>VC0533 [M] COG0739 Membrane proteins related to metalloendopeptidases Vch
           Vibrio cholerae
          Length = 311

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/62 (62%), Positives = 49/62 (79%)

Query: 1   VKHSNNLLSAYAHNKTILVKEGQAVTKGQKIAEMGNSDSDSVKLHFEIRQQGKPVDPSKY 60
           +KH+ + LSAYAHN  +L KEGQ V  GQKIA MG+S ++SV+LHFEIR QGK V+P +Y
Sbjct: 250 IKHNEHYLSAYAHNDQLLAKEGQTVQAGQKIATMGSSGTNSVRLHFEIRYQGKSVNPKRY 309

Query: 61  LP 62
           LP
Sbjct: 310 LP 311


>ygeR [M] COG0739 Membrane proteins related to metalloendopeptidases Eco
           Escherichia coli K12
          Length = 259

 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 35/64 (54%), Positives = 50/64 (78%)

Query: 1   VKHSNNLLSAYAHNKTILVKEGQAVTKGQKIAEMGNSDSDSVKLHFEIRQQGKPVDPSKY 60
           +KHS + ++AYAHN T+LV  GQ+V  GQKIA MG++D+ SV+LHF+IR +   +DP +Y
Sbjct: 190 IKHSEDYITAYAHNDTMLVNNGQSVKAGQKIATMGSTDAASVRLHFQIRYRATAIDPLRY 249

Query: 61  LPPR 64
           LPP+
Sbjct: 250 LPPQ 253