BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0057.p (304 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1205 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransfe... 287 2e-77 PA3624 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransfer... 184 2e-46 VC0532 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransfer... 173 5e-43 YPO3357 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransfe... 170 3e-42 XF0857 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransfer... 166 5e-41 >RSc1205 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase Rso Ralstonia solanacearum Length = 321 Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 171/330 (51%), Positives = 211/330 (63%), Gaps = 43/330 (13%) Query: 4 KSSRFPLSLSSVVEKK-------GKAASGAPARTVVTPQTATRNAALDSGRLAAKAQAAR 56 + RFPL+L +VVE+K + +SG A ++ TP A A A R Sbjct: 6 RGRRFPLTLDAVVERKPAERQREKRISSGVNAVSLPTP--------------ARTASAER 51 Query: 57 AAQHPAPSSSAGKPATPVSRTALPTPIATANRS-------APLVSEAVRKAMVARVAKQG 109 A+ PAP + A + A R+ + S+ R+A+VARV G Sbjct: 52 ASSTPAPGPGPQRVAGVDAAVGAVAASAVQARTQAAHAAAGGMASDRARQALVARVQAAG 111 Query: 110 VSDQKVLAAMEAVPRHMFMEPGLSSQAYIDASLPIGHHQTISQPYIVARMIEIM-RDNNK 168 V+D +VLAA+ VPRH+F++ GL+SQAY DA+LPIGH QTIS+P +V RMIE++ R+ + Sbjct: 112 VTDARVLAAIGRVPRHLFVDAGLASQAYEDAALPIGHQQTISKPSVVGRMIELLLRERPE 171 Query: 169 GKA---------LERVLEIGTGCGYQAAVLSLVAKEVYSIERIKPLHELAKTNLRPLRIA 219 A L RVLEIGTGCGYQAAVLS VA EVYSIERI+PLHE AK NLRPLR+ Sbjct: 172 PSAQAAQVPAQPLSRVLEIGTGCGYQAAVLSQVAGEVYSIERIRPLHEKAKANLRPLRVP 231 Query: 220 NIRLHYGDGMLGLPQVAPFDGIILAAAGLEVPQALLEQLAIGGRLVAPV-----GGRQQM 274 NIRLHYGDGMLGLP+ APFD II+AAAGLEVPQALL+QLAIGGRL+APV GG Q Sbjct: 232 NIRLHYGDGMLGLPKAAPFDAIIVAAAGLEVPQALLDQLAIGGRLIAPVATDRAGGPSQQ 291 Query: 275 LQLIERISKFEWTSETLEECHFVPLRPGTV 304 L LIER +F++ S LE FVPL+ GTV Sbjct: 292 LVLIERRGRFQFHSTALEGVFFVPLKSGTV 321 >PA3624 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase Pae Pseudomonas aeruginosa Length = 211 Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 96/214 (44%), Positives = 144/214 (67%), Gaps = 5/214 (2%) Query: 92 LVSEAVRKAMVARVAKQGVSDQKVLAAMEAVPRHMFMEPGLSSQAYIDASLPIGHHQTIS 151 + S+ R+ ++ R+ ++G+S+ VL + PRH+F++ LS +AY D +LPIGH+QTIS Sbjct: 1 MTSQRTRERLIQRLYEEGLSNAHVLEVIRRTPRHLFVDEALSHRAYEDTALPIGHNQTIS 60 Query: 152 QPYIVARMIEIMRDNNKGKALERVLEIGTGCGYQAAVLSLVAKEVYSIERIKPLHELAKT 211 QP++VARM E++ L++V+EIGTG GYQ AVL+ + + V+S+ERI+ L + AK Sbjct: 61 QPFMVARMTELLL---AAGPLDKVMEIGTGSGYQTAVLAQLVERVFSVERIQALQDKAKE 117 Query: 212 NLRPLRIANIRLHYGDGMLGLPQVAPFDGIILAAAGLEVPQALLEQLAIGGRLVAPVGGR 271 L L + N+ +GDG G +AP++GII+ AA EVPQ+LL+QLA GGRLV PVGG Sbjct: 118 RLAELNLRNVVFRWGDGWEGWSALAPYNGIIVTAAATEVPQSLLDQLAPGGRLVIPVGGG 177 Query: 272 Q-QMLQLIERISKFEWTSETLEECHFVPLRPGTV 304 + Q L LI R ++ ++ + L+ FVPL G + Sbjct: 178 EVQQLMLIVR-TEDGFSRQVLDSVRFVPLLNGPI 210 >VC0532 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase Vch Vibrio cholerae Length = 208 Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 94/204 (46%), Positives = 130/204 (63%), Gaps = 5/204 (2%) Query: 101 MVARVAKQGVSDQKVLAAMEAVPRHMFMEPGLSSQAYIDASLPIGHHQTISQPYIVARMI 160 ++ + +QG++ +VLAA+ A+PR F+ P + QAY + +LPIG QTISQPYIVA+M Sbjct: 9 LIQFLTEQGITSPQVLAAIHALPREFFVAPAMMHQAYDNNALPIGQGQTISQPYIVAKMT 68 Query: 161 EIMRDNNKGKALERVLEIGTGCGYQAAVLSLVAKEVYSIERIKPLHELAKTNLRPLRIAN 220 E++ + K VLEIGTG GYQ AVL+ + V+++ERIK L AK L+ L I N Sbjct: 69 ELLALTPETK----VLEIGTGSGYQTAVLAKLVNHVFTVERIKTLQWDAKRRLKQLDIYN 124 Query: 221 IRLHYGDGMLGLPQVAPFDGIILAAAGLEVPQALLEQLAIGGRLVAPVGGRQQMLQLIER 280 + +GDG G P PFD I++ AA +VPQ+LL+QLA GGR+V PVG +Q L I R Sbjct: 125 VSTKHGDGWQGWPARGPFDAILVTAAAAKVPQSLLDQLAEGGRMVIPVGEDEQYLYKIVR 184 Query: 281 ISKFEWTSETLEECHFVPLRPGTV 304 ++ SE +E FVPL G + Sbjct: 185 QGG-QFISERVEAVRFVPLVAGDL 207 >YPO3357 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase Ype Yersinia pestis Length = 208 Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 94/206 (45%), Positives = 133/206 (64%), Gaps = 5/206 (2%) Query: 99 KAMVARVAKQGVSDQKVLAAMEAVPRHMFMEPGLSSQAYIDASLPIGHHQTISQPYIVAR 158 + ++ ++ +QG+ D+++L A+EAVPR F++ L+ +AY + +LPIG QTISQPY+VAR Sbjct: 7 QTLLMQLRQQGIHDERLLQAIEAVPRERFVDEALAHKAYENTALPIGAGQTISQPYMVAR 66 Query: 159 MIEIMRDNNKGKALERVLEIGTGCGYQAAVLSLVAKEVYSIERIKPLHELAKTNLRPLRI 218 M E+++ RVLEIGTG GYQ A+L+ + V S+ERIK L AK L+ L + Sbjct: 67 MTELLQLTPTS----RVLEIGTGSGYQTAILAHLVDHVCSVERIKGLQWQAKRRLKQLDL 122 Query: 219 ANIRLHYGDGMLGLPQVAPFDGIILAAAGLEVPQALLEQLAIGGRLVAPVGGRQQMLQLI 278 N+ +GDG LG PFD II+ AA E+P ALLEQL GG LV PVG + Q L+ + Sbjct: 123 HNVSTRHGDGWLGWQSRGPFDAIIVTAAPPEIPDALLEQLDEGGILVLPVGEQFQTLKYV 182 Query: 279 ERISKFEWTSETLEECHFVPLRPGTV 304 +R + E+ ET+E FVPL G + Sbjct: 183 QRRNN-EYHIETVEAVRFVPLVKGEL 207 >XF0857 [O] COG2518 Protein-L-isoaspartate carboxylmethyltransferase Xfa Xylella fastidiosa 9a5c Length = 225 Score = 166 bits (421), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 97/214 (45%), Positives = 135/214 (63%), Gaps = 10/214 (4%) Query: 92 LVSEAVRKAMVARVAKQGVSDQKVLAAMEAVPRHMFMEPGLSSQAYIDASLPIGHHQTIS 151 + S+ VR +V R+ + G+ D++VL + VPRH+F++ L+ +AY D +LPIGH QTIS Sbjct: 16 MTSQRVRDRLVERLRECGIQDERVLTTIRIVPRHLFIDEALALRAYEDTALPIGHGQTIS 75 Query: 152 QPYIVARMIE-IMRDNNKGKALERVLEIGTGCGYQAAVLSLVAKEVYSIERIKPLHELAK 210 QP++VARM E +M+ K ++LEIGTG GYQ+A+L+ + EVY+IERI L A+ Sbjct: 76 QPWVVARMTEAVMQVAPK-----KILEIGTGSGYQSAILASLGLEVYTIERIGKLLRQAR 130 Query: 211 TNLRPLRIANIRLHYGDGMLGLPQVAPFDGIILAAAGLEVPQALLEQLAIGGRLVAPVG- 269 R L I IR + DG +G + AP++ I++ AA + L+EQLAIGGRLVAPVG Sbjct: 131 KRFRQLGI-KIRSKHDDGSIGWTEHAPYNAILVTAAAPTLIDTLIEQLAIGGRLVAPVGT 189 Query: 270 -GRQQMLQLIERISKFEWTSETLEECHFVPLRPG 302 Q ++QL I T E LE FV L PG Sbjct: 190 ASEQALVQLTRTIDG-NITHEILEPVTFVSLLPG 222