BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0048.p         (181 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1272 [R] COG1485 Predicted ATPase Rso Ralstonia solanacearum       259   2e-69
PA4438 [R] COG1485 Predicted ATPase Pae Pseudomonas aeruginosa        154   1e-37
NMB1306 [R] COG1485 Predicted ATPase Nme Neisseria meningitidis ...   142   3e-34
NMA1520 [R] COG1485 Predicted ATPase NmA Neisseria meningitidis ...   142   3e-34
VC0568 [R] COG1485 Predicted ATPase Vch Vibrio cholerae               130   2e-30

>RSc1272 [R] COG1485 Predicted ATPase Rso Ralstonia solanacearum
          Length = 365

 Score =  259 bits (662), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 120/164 (73%), Positives = 140/164 (85%)

Query: 11  AGVDYRKRALEQVRIYHTPLNAATDSELREAFAAVAETADEDTRVHIEAREIRALRRAGS 70
           AG+DYRKRA+EQV+ YHTPL A  +S LR+AFAAVAE  DE   +HIE REIRA R+AG 
Sbjct: 195 AGIDYRKRAMEQVQAYHTPLGAQANSALRDAFAAVAEAPDESPILHIEHREIRAQRKAGG 254

Query: 71  AIWFDFATLCGGPRSQNDYLEIASRFQTVILSGIPRMSAAMSSEARRFTWLIDVFYDHKV 130
            +WFDFATLCGGPRSQNDYLEIA+RF TVIL+ +P+M+  M+SEARRFTWLIDV YDHKV
Sbjct: 255 VVWFDFATLCGGPRSQNDYLEIAARFHTVILADVPKMTPRMASEARRFTWLIDVLYDHKV 314

Query: 131 KLIMSAEVEPEELYTEGMLANEFHRTVSRIIEMQSREYMDSERR 174
           KL+MSAEV  + LYTEG +ANEFHRTVSRIIEMQSREY+++ RR
Sbjct: 315 KLLMSAEVPADALYTEGQMANEFHRTVSRIIEMQSREYLEAPRR 358


>PA4438 [R] COG1485 Predicted ATPase Pae Pseudomonas aeruginosa
          Length = 364

 Score =  154 bits (389), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 79/167 (47%), Positives = 104/167 (62%), Gaps = 3/167 (1%)

Query: 11  AGVDYRKRALEQVRIYHTPLNAATDSELREAFAAVAE---TADEDTRVHIEAREIRALRR 67
           +GVDYR RALEQ  ++H PL+   + E+  +F A+      A  D  + IE REIRA   
Sbjct: 197 SGVDYRLRALEQAELFHWPLSEQVEEEMARSFKALTPDCAKAQRDEALMIENREIRARLT 256

Query: 68  AGSAIWFDFATLCGGPRSQNDYLEIASRFQTVILSGIPRMSAAMSSEARRFTWLIDVFYD 127
                WF+F  LC GPRSQNDY+E+A  F  V++S + +M       ARRF  L+D FYD
Sbjct: 257 CDDVAWFEFRELCDGPRSQNDYIELAKIFHAVLISNVEQMGVTKDDMARRFINLVDEFYD 316

Query: 128 HKVKLIMSAEVEPEELYTEGMLANEFHRTVSRIIEMQSREYMDSERR 174
             VKLI+SAEVE ++LY+ G L  EF RT+SR++EMQS EY+    R
Sbjct: 317 RSVKLIISAEVELKDLYSGGRLEFEFQRTLSRLLEMQSHEYLTRPHR 363


>NMB1306 [R] COG1485 Predicted ATPase Nme Neisseria meningitidis MC58
          Length = 383

 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/161 (44%), Positives = 97/161 (60%), Gaps = 1/161 (0%)

Query: 11  AGVDYRKRALEQVRIYHTPLNAATDSELREAFAAVAETADEDTRVH-IEAREIRALRRAG 69
            G DYR R L    I+ TP N   +++L + F  +    D +  +  I  REI     +G
Sbjct: 210 GGEDYRLRTLRPAEIFFTPANEENEAKLAKLFKEMTGITDLNPGISTIHGREIPHKAESG 269

Query: 70  SAIWFDFATLCGGPRSQNDYLEIASRFQTVILSGIPRMSAAMSSEARRFTWLIDVFYDHK 129
            AIWFDF  LC GPRSQ+DYL +A  ++ V +SG+ ++S    +EARR TWLIDV YD +
Sbjct: 270 RAIWFDFRALCFGPRSQSDYLYLAEHYEMVFISGLEQLSPQEKAEARRLTWLIDVLYDFR 329

Query: 130 VKLIMSAEVEPEELYTEGMLANEFHRTVSRIIEMQSREYMD 170
           VKL  +  V+   +YTEG  A EF RT SR++EMQS  Y++
Sbjct: 330 VKLCATGAVDVNHIYTEGDFAEEFTRTASRMVEMQSEVYLE 370


>NMA1520 [R] COG1485 Predicted ATPase NmA Neisseria meningitidis Z2491
          Length = 383

 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/161 (44%), Positives = 97/161 (60%), Gaps = 1/161 (0%)

Query: 11  AGVDYRKRALEQVRIYHTPLNAATDSELREAFAAVAETADEDTRVH-IEAREIRALRRAG 69
            G DYR R L    I+ TP N   +++L + F  +    D +  +  I  REI     +G
Sbjct: 210 GGEDYRLRTLRPAEIFFTPANEENEAKLAKLFKEMTGITDLNPGISTIHGREIPHKAESG 269

Query: 70  SAIWFDFATLCGGPRSQNDYLEIASRFQTVILSGIPRMSAAMSSEARRFTWLIDVFYDHK 129
            AIWFDF  LC GPRSQ+DYL +A  ++ V +SG+ ++S    +EARR TWLIDV YD +
Sbjct: 270 RAIWFDFRALCFGPRSQSDYLYLAEHYEMVFISGLEQLSPQEKAEARRLTWLIDVLYDFR 329

Query: 130 VKLIMSAEVEPEELYTEGMLANEFHRTVSRIIEMQSREYMD 170
           VKL  +  V+   +YTEG  A EF RT SR++EMQS  Y++
Sbjct: 330 VKLCATGAVDVNHIYTEGDFAEEFTRTASRMVEMQSEVYLE 370


>VC0568 [R] COG1485 Predicted ATPase Vch Vibrio cholerae
          Length = 367

 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 100/163 (61%), Gaps = 1/163 (0%)

Query: 11  AGVDYRKRALEQVRIYHTPLNA-ATDSELREAFAAVAETADEDTRVHIEAREIRALRRAG 69
           +GVDYR R L+Q  IYH PL++ ATD+  R     ++     +T++ +  R I       
Sbjct: 202 SGVDYRLRTLQQAEIYHYPLDSKATDNLQRYFQQLISSEQTPETQIDVNHRMITVEAAGD 261

Query: 70  SAIWFDFATLCGGPRSQNDYLEIASRFQTVILSGIPRMSAAMSSEARRFTWLIDVFYDHK 129
             ++  FA LC   RSQNDY+E++  + TV+L+ + +M+ +    ARRF  L+D FY+  
Sbjct: 262 GVLYATFAQLCQTARSQNDYIELSKIYHTVLLADVKQMNKSSDDAARRFIALVDEFYERH 321

Query: 130 VKLIMSAEVEPEELYTEGMLANEFHRTVSRIIEMQSREYMDSE 172
           VKLI+SAEV   +LYT+G+L  EF R  SR+IEMQS +Y+  E
Sbjct: 322 VKLIISAEVPLTDLYTDGLLEFEFKRCQSRLIEMQSHDYLAKE 364