BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0018.p         (64 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGpA545 [R] COG3668 Plasmid stabilization system protein Atu Agr...    74   1e-13
PA4877 [R] COG3668 Plasmid stabilization system protein Pae Pseu...    63   1e-10

>AGpA545 [R] COG3668 Plasmid stabilization system protein Atu
          Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 97

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/43 (79%), Positives = 37/43 (86%)

Query: 7  MPRGDKSSYTDKQKRQAAHIEAGYEKRGVGHKEAERRAWATEN 49
          MPRGDKS+YTDKQKR+A HIE GYE RGV  +EAERRAWAT N
Sbjct: 1  MPRGDKSAYTDKQKRKAEHIEEGYEDRGVSEREAERRAWATVN 43


>PA4877 [R] COG3668 Plasmid stabilization system protein Pae Pseudomonas
          aeruginosa
          Length = 135

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/44 (65%), Positives = 34/44 (77%)

Query: 7  MPRGDKSSYTDKQKRQAAHIEAGYEKRGVGHKEAERRAWATENK 50
          MPRGDKS Y+DKQ+R+A HIE  Y+ +GV   EAE RAWAT NK
Sbjct: 1  MPRGDKSKYSDKQQRKAEHIEESYKAKGVSESEAEARAWATVNK 44