BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0165.p         (142 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll2589 [GEPR] COG0477 Permeases of the major facilitator superf...   150   9e-37
AGl781 [GEPR] COG0477 Permeases of the major facilitator superfa...   101   4e-22
SMc03167 [GEPR] COG0477 Permeases of the major facilitator super...    94   1e-19
BMEII1119 [GEPR] COG0477 Permeases of the major facilitator supe...    93   2e-19
mlr4819 [GEPR] COG0477 Permeases of the major facilitator superf...    83   2e-16

>mll2589 [GEPR] COG0477 Permeases of the major facilitator superfamily Mlo
           Mesorhizobium loti
          Length = 518

 Score =  150 bits (379), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 80/145 (55%), Positives = 96/145 (66%), Gaps = 7/145 (4%)

Query: 1   VAPVVTLTLGALKPERLKQASGLFNLMRNLGGAIGIAVCGTILNDRTNLHFLRLAEHLNS 60
           VAP V L LG+L PERLK ASGLFN MRNLGGA+GIA+CG ILNDRTN HFL +A HL  
Sbjct: 378 VAPSVNLGLGSLPPERLKYASGLFNTMRNLGGAVGIAICGAILNDRTNFHFLTIASHLTP 437

Query: 61  ANESMNNLLQNTGANMLAWG-LDGGSAP--TGALQQLWKLTMREAQTQTFADAFLAVMAC 117
            NE+   ++       L +G L G  A   T +L+QLW L  REA T  +ADAFL +MA 
Sbjct: 438 QNEAAMRVVDTIA---LRYGQLPGAVAAGHTASLKQLWALAYREASTMAYADAFLVIMAA 494

Query: 118 FLVAIVLIPLMHKVAPPKAPSADAH 142
           F++A  L+P +  V  PKAP  DAH
Sbjct: 495 FVIATALVPFLRNVT-PKAPPPDAH 518


>AGl781 [GEPR] COG0477 Permeases of the major facilitator superfamily Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 527

 Score =  101 bits (252), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 54/129 (41%), Positives = 80/129 (62%), Gaps = 3/129 (2%)

Query: 1   VAPVVTLTLGALKPERLKQASGLFNLMRNLGGAIGIAVCGTILNDRTNLHFLRLAEHLNS 60
           + P+  + LG L P R++ ASGLFNL RNLGGA+G+AV  T+L+ RT+ H++RLAEH++ 
Sbjct: 390 MVPINNIALGTLPPARIRNASGLFNLTRNLGGAVGLAVINTLLSQRTDDHYVRLAEHVSY 449

Query: 61  ANESMNNLLQNTGANMLAWGLDGGSAPTGALQQLWKLTMREAQTQTFADAFLAVMACFLV 120
           +N      L N GAN  ++GLDG S    A+++L  +  ++A    FAD F A+   F  
Sbjct: 450 SNPQALEWLNNVGANYDSYGLDGASV---AIKKLVGMVSQQAWMLAFADVFFALTLLFGS 506

Query: 121 AIVLIPLMH 129
            I +  L+ 
Sbjct: 507 LIFMTVLIQ 515


>SMc03167 [GEPR] COG0477 Permeases of the major facilitator superfamily Sme
           Sinorhizobium meliloti
          Length = 529

 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 3/130 (2%)

Query: 1   VAPVVTLTLGALKPERLKQASGLFNLMRNLGGAIGIAVCGTILNDRTNLHFLRLAEHLNS 60
           + P+  + LG L P R++ ASGL+NL RNLGGA+G+AV  TIL  R + H+ RLAEH+  
Sbjct: 392 MVPINNIALGTLPPARIRNASGLYNLTRNLGGAVGLAVINTILTQRQDFHYARLAEHVEW 451

Query: 61  ANESMNNLLQNTGANMLAWGLDGGSAPTGALQQLWKLTMREAQTQTFADAFLAVMACFLV 120
            N      ++N  +   A GLDG +A   A++QL  +  ++A   +F D F+ +   FL 
Sbjct: 452 GNPVAVERMRNIASTFTAHGLDGTTA---AVKQLAAMVQQQAVIMSFIDVFVLLTVLFLS 508

Query: 121 AIVLIPLMHK 130
            I  + ++ K
Sbjct: 509 MIAGVLMIAK 518


>BMEII1119 [GEPR] COG0477 Permeases of the major facilitator superfamily Bme
           Brucella melitensis
          Length = 525

 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 3/142 (2%)

Query: 1   VAPVVTLTLGALKPERLKQASGLFNLMRNLGGAIGIAVCGTILNDRTNLHFLRLAEHLNS 60
           + P+  L LG L P  +K ASGLFNL RNLGGA+G+AV  TIL  R ++H+ RLAEH+ +
Sbjct: 387 MVPINNLALGTLPPSLMKNASGLFNLTRNLGGAVGLAVINTILTRRGDMHYARLAEHVRN 446

Query: 61  ANESMNNLLQNTGANMLAWGLDGGSAPTGALQQLWKLTMREAQTQTFADAFLAVMACFLV 120
            N    N++ N  A   A G+DG S    A+ +L  +  ++A   +F D F  +   F  
Sbjct: 447 GNAEAENMIANLTAKYNAAGMDGASI---AIAKLSGMVRQQATLLSFIDVFFILTMMFCS 503

Query: 121 AIVLIPLMHKVAPPKAPSADAH 142
             +   L+ K +P        H
Sbjct: 504 LAICAMLLRKPSPAAGGGGGGH 525


>mlr4819 [GEPR] COG0477 Permeases of the major facilitator superfamily Mlo
           Mesorhizobium loti
          Length = 531

 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 74/143 (51%), Gaps = 4/143 (2%)

Query: 1   VAPVVTLTLGALKPERLKQASGLFNLMRNLGGAIGIAVCGTILNDRTNLHFLRLAEHLNS 60
           + P+  + LG L P+RLK ASGLFNL RNLGGA+G+A+  T+L +R   H+ RL EH+  
Sbjct: 392 MVPINNIALGTLPPDRLKNASGLFNLTRNLGGAVGLALINTVLINRNAFHYARLGEHVQW 451

Query: 61  ANESMNNLLQNTGANM-LAWGLDGGSAPTGALQQLWKLTMREAQTQTFADAFLAVMACFL 119
            + +    LQN   N     GLD   A   A+ +L  +  ++A   +F D F  +   F 
Sbjct: 452 GSAAAQTKLQNMTLNFEQTSGLDAAGA---AISKLSGMVHQQAALLSFMDVFYMLTVLFA 508

Query: 120 VAIVLIPLMHKVAPPKAPSADAH 142
              +   L++K A P       H
Sbjct: 509 TLGLFAMLINKPAAPGGGGGGGH 531