BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0128.p (179 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEII0816 [IQR] COG1028 Dehydrogenases with different specificit... 276 3e-74 PA2554 [IQR] COG1028 Dehydrogenases with different specificities... 268 4e-72 RSc2534 [IQR] COG1028 Dehydrogenases with different specificitie... 261 5e-70 SMa1452 [IQR] COG1028 Dehydrogenases with different specificitie... 256 2e-68 mlr2803 [IQR] COG1028 Dehydrogenases with different specificitie... 231 5e-61 >BMEII0816 [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Bme Brucella melitensis Length = 255 Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 127/173 (73%), Positives = 153/173 (88%) Query: 7 LINCAGIAPAEKVLGKEGVHRLESFVRAVNINLIGTFNMARLAVEAISENEPSENGERGV 66 L+NCAG+AP EKVLG+EG H+LE+F R ++INLIGTFNM RLA EA+++NEP + GERGV Sbjct: 83 LVNCAGVAPGEKVLGREGAHKLETFTRTISINLIGTFNMLRLAAEAMAKNEPGQGGERGV 142 Query: 67 IINTASIAAFDGQVGQAAYAASKGGVVAMTLPLARELSRYGIRVMTIAPGIIETPMMLDM 126 IINTAS+AAFDGQ+GQAAY+ASKGGV AMTLP+AREL+R+GIRVMTIAPGI +TPMM M Sbjct: 143 IINTASVAAFDGQIGQAAYSASKGGVAAMTLPVARELARHGIRVMTIAPGIFKTPMMAGM 202 Query: 127 PAEVLSSLGKMVPFPPRLGKPSEFASLVEHILENRYLNGEVIRMDGALRMGAK 179 P EV +LG VPFPPRLG+P+E+A+LV HI+EN+ LNGEVIR+DGALRM AK Sbjct: 203 PQEVQDALGASVPFPPRLGEPAEYAALVRHIVENQMLNGEVIRLDGALRMAAK 255 >PA2554 [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Pae Pseudomonas aeruginosa Length = 255 Score = 268 bits (685), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 125/179 (69%), Positives = 150/179 (83%) Query: 1 MGSVVGLINCAGIAPAEKVLGKEGVHRLESFVRAVNINLIGTFNMARLAVEAISENEPSE 60 G + GL NCAG+APAEKVLG+ G+H LESF R ++INL+G+FNM RLA EA+S+ +P E Sbjct: 77 FGGLHGLANCAGVAPAEKVLGRNGIHALESFRRVIDINLVGSFNMLRLAAEAMSQGQPDE 136 Query: 61 NGERGVIINTASIAAFDGQVGQAAYAASKGGVVAMTLPLARELSRYGIRVMTIAPGIIET 120 GERGVI+NTAS+AAFDGQ+GQAAY+ASK GVV MTLP+AREL+R+GIRVMTIAPGI ET Sbjct: 137 GGERGVIVNTASVAAFDGQIGQAAYSASKSGVVGMTLPIARELARFGIRVMTIAPGIFET 196 Query: 121 PMMLDMPAEVLSSLGKMVPFPPRLGKPSEFASLVEHILENRYLNGEVIRMDGALRMGAK 179 PMM MP EV SLG VPFPPRLG+P E+A+LV I+EN LNGEVIR+DGA+RM A+ Sbjct: 197 PMMAGMPQEVRDSLGASVPFPPRLGRPDEYAALVRQIIENSMLNGEVIRLDGAIRMAAR 255 >RSc2534 [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Rso Ralstonia solanacearum Length = 252 Score = 261 bits (668), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 125/179 (69%), Positives = 147/179 (82%) Query: 1 MGSVVGLINCAGIAPAEKVLGKEGVHRLESFVRAVNINLIGTFNMARLAVEAISENEPSE 60 +G++ GL+NCAGIAPA + +GK G H L+ F R +NINLIGTFNM RLA A++ N P+ Sbjct: 74 LGALAGLVNCAGIAPASRTVGKAGPHPLDQFARVININLIGTFNMIRLAATAMTANAPNA 133 Query: 61 NGERGVIINTASIAAFDGQVGQAAYAASKGGVVAMTLPLARELSRYGIRVMTIAPGIIET 120 GERGVIINTAS+AAFDGQ+GQAAYAASKGGVVAMTL +AR+LSR GIRVMTIAPGI ET Sbjct: 134 GGERGVIINTASVAAFDGQIGQAAYAASKGGVVAMTLAIARDLSRDGIRVMTIAPGIFET 193 Query: 121 PMMLDMPAEVLSSLGKMVPFPPRLGKPSEFASLVEHILENRYLNGEVIRMDGALRMGAK 179 PM+L MP EV +LGKMVPFPPRLGKP+E+A L I+EN LNGE IR+DGA+RM K Sbjct: 194 PMLLGMPPEVQDALGKMVPFPPRLGKPAEYAQLARAIIENPMLNGETIRLDGAIRMQPK 252 >SMa1452 [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Sme Sinorhizobium meliloti Length = 255 Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 121/179 (67%), Positives = 144/179 (80%) Query: 1 MGSVVGLINCAGIAPAEKVLGKEGVHRLESFVRAVNINLIGTFNMARLAVEAISENEPSE 60 G V GL+NCAG AP EK+LG+ G H L+SF R V +NLIGTFNM RLA E +S+ EP Sbjct: 77 FGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDA 136 Query: 61 NGERGVIINTASIAAFDGQVGQAAYAASKGGVVAMTLPLARELSRYGIRVMTIAPGIIET 120 +GERGVI+NTASIAAFDGQ+GQAAYAASKGGV A+TLP AREL+R+GIRV+TIAPGI +T Sbjct: 137 DGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDT 196 Query: 121 PMMLDMPAEVLSSLGKMVPFPPRLGKPSEFASLVEHILENRYLNGEVIRMDGALRMGAK 179 PMM MP +V +L VPFPPRLG+ E+A+LV+HI EN LNGEVIR+DGALRM + Sbjct: 197 PMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICENTMLNGEVIRLDGALRMAPR 255 >mlr2803 [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Mlo Mesorhizobium loti Length = 253 Score = 231 bits (590), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 109/173 (63%), Positives = 136/173 (78%) Query: 7 LINCAGIAPAEKVLGKEGVHRLESFVRAVNINLIGTFNMARLAVEAISENEPSENGERGV 66 L+NCAGIA K +GK+G H L+ + + + +NLIGTFNM RL + + EP + GERGV Sbjct: 81 LVNCAGIAIGVKTIGKDGPHPLDQYRKVIEVNLIGTFNMIRLVADRAASLEPLQGGERGV 140 Query: 67 IINTASIAAFDGQVGQAAYAASKGGVVAMTLPLARELSRYGIRVMTIAPGIIETPMMLDM 126 I+NTAS+AA+DGQ+GQAAY+ASKGGVV MTLP+AR+L+R GIRV TIAPGI +TPMM M Sbjct: 141 IVNTASVAAYDGQIGQAAYSASKGGVVGMTLPVARDLARSGIRVCTIAPGIFKTPMMAGM 200 Query: 127 PAEVLSSLGKMVPFPPRLGKPSEFASLVEHILENRYLNGEVIRMDGALRMGAK 179 P EV SLG VPFP RLG+PSE+A+L HI+EN+ LNGE IR+DGA+RM K Sbjct: 201 PQEVQDSLGAAVPFPSRLGEPSEYAALALHIIENQMLNGETIRLDGAIRMAPK 253