BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0036.p (575 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0656 [Q] COG2132 Putative multicopper oxidases Rso Ralstonia ... 784 0.0 PA2065 [Q] COG2132 Putative multicopper oxidases Pae Pseudomonas... 610 e-174 XF0132 [Q] COG2132 Putative multicopper oxidases Xfa Xylella fas... 577 e-164 CC0964 Non COG 457 e-128 Cgl2906 [Q] COG2132 Putative multicopper oxidases Cgl Corynebact... 142 2e-33 >RSp0656 [Q] COG2132 Putative multicopper oxidases Rso Ralstonia solanacearum Length = 605 Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/575 (65%), Positives = 442/575 (76%), Gaps = 32/575 (5%) Query: 11 PILTGNVFDLVVAESVVNFTGKQTTATTINGSLPAPTLRWKEGEMVTINVTNKLREHTSI 70 P+L G FDLV+ E+ VNFTGK ATT+NG LP PTLRW+EG+ VT+ VTN+LRE TSI Sbjct: 53 PVLRGTEFDLVIDETPVNFTGKPAMATTVNGMLPGPTLRWREGDTVTLRVTNRLREPTSI 112 Query: 71 HWHGIILPFRMDGVPGISFAGIAPGETFTYQFKVKQSGTYWYHSHSGMQEQTGMYGAIVI 130 HWHGI+LPF+MDGVPG+SF GIAPGETFTY+F+V+QSG+YWYHSHSG QE TG+YG ++I Sbjct: 113 HWHGILLPFQMDGVPGLSFHGIAPGETFTYRFQVRQSGSYWYHSHSGFQEMTGVYGGLII 172 Query: 131 EPIDSGKKMVDREHVVLFSDWMDENPMSVLSKLKKQGDFYNLNRLTAGDFVRDARKDGVK 190 +P S DR++ VL +DW DE+PM +L+KLK Q D+YN ++ T DF RD DG + Sbjct: 173 DPAGSDPIRADRDYTVLLADWTDEDPMRILAKLKTQSDYYNYHQPTVADFFRDVASDGWQ 232 Query: 191 AALGNRAMWNEMRMNPTDLGDLSAAVLTYLANGVTPAGNWTALFKPGEKVRLRCINGSGN 250 AAL R MWN+MRM+PTDL DLS A LT+LANG+TPAGNWT LF PGE VRLR ING+G+ Sbjct: 233 AALAKRRMWNQMRMSPTDLADLSGATLTHLANGITPAGNWTGLFAPGETVRLRFINGAGS 292 Query: 251 TFYDVRVPGLKLKVIQVDGVDIEPVSVDEFRFGPGETCDVVVEPKDEAYTIFAQSMERTG 310 TFYDVR+PGLKLKV+QVDG DIEPV+VDEFRFGPGETCDV+V PKD+A+TIF QSM+RTG Sbjct: 293 TFYDVRIPGLKLKVVQVDGQDIEPVTVDEFRFGPGETCDVLVSPKDDAHTIFCQSMDRTG 352 Query: 311 YAMGTLAVRAGLAAPVPDIDKPEWL--------SMNDMMGDMSSMGGMDHGAMANMPLMN 362 YA GTLAVR G+ APVP +D P+WL D M MD G + M + Sbjct: 353 YARGTLAVRPGMQAPVPALDTPQWLTMTDMMGDMGGMGGMDHGGMTMMDAGDITPMAPAD 412 Query: 363 MDSMSGMDSMDSMAGGVQPMQGMDHSRHQMASGNP--LKVPSKKARHASTEYGASTDSKV 420 D M+ MD SG P L+VPS+K RHA TEYG TD +V Sbjct: 413 TDGMAMMD----------------------GSGGPDDLRVPSRKVRHARTEYGPGTDMRV 450 Query: 421 DSARTNLDDPGVGLRNNGRRVLTLADMHTIGGALDDRGPEREVELHLTGNMERYAWSLDG 480 D+ RTNLDDPG+GLR NGRRVL LAD HT+GG LD RGP+RE+E+HLTGNMERY WS+DG Sbjct: 451 DTPRTNLDDPGIGLRGNGRRVLVLADQHTLGGPLDRRGPQREIEMHLTGNMERYTWSIDG 510 Query: 481 LEFGKSTPVHFRYGERLRVILHNDTMMTHPMHLHGLWSELETPNGDFLARRHTIPVQPAQ 540 +E+G+S P+HFR+GERLRVILHNDTMMTHPMHLHG+WSELE P+G F RRHT+PVQPAQ Sbjct: 511 VEYGRSAPIHFRHGERLRVILHNDTMMTHPMHLHGMWSELEAPDGRFQVRRHTVPVQPAQ 570 Query: 541 RISFLVTADALGRWAWHCHLMYHMDMGMFREVIVS 575 RISFLVTADALGRWAWHCHLM HMD GMFRE +V+ Sbjct: 571 RISFLVTADALGRWAWHCHLMLHMDAGMFREAVVA 605 >PA2065 [Q] COG2132 Putative multicopper oxidases Pae Pseudomonas aeruginosa Length = 632 Score = 610 bits (1574), Expect = e-174, Method: Compositional matrix adjust. Identities = 315/607 (51%), Positives = 400/607 (65%), Gaps = 44/607 (7%) Query: 4 PARGPAAP----ILTGNVFDLVVAESVVNFTGKQTTATTINGSLPAPTLRWKEGEMVTIN 59 PA A P +L G+ FDL + E+ VN +G A TINGSLP PTLRW+EG+ VT+ Sbjct: 28 PAWALAGPGQQNLLAGDSFDLFIGETPVNLSGSPAAAMTINGSLPGPTLRWREGDNVTLR 87 Query: 60 VTNKLREHTSIHWHGIILPFRMDGVPGISFAGIAPGETFTYQFKVKQSGTYWYHSHSGMQ 119 V N+L E TSIHWHGIILP MDGVPG+SF GIAPG + Y+FKV+Q+GTYWYHSHSG+Q Sbjct: 88 VRNRLAEDTSIHWHGIILPANMDGVPGLSFEGIAPGGLYEYRFKVRQNGTYWYHSHSGLQ 147 Query: 120 EQTGMYGAIVIEPIDSGKKMVDREHVVLFSDWMDENPMSVLSKLKKQGDFYNLNRLTAGD 179 EQ G+YGA+VI+ + DR++VVL SDW DE P +L+KLKKQ D+YN ++ T GD Sbjct: 148 EQAGVYGALVIDAREPEPFSYDRDYVVLLSDWSDEKPQRILAKLKKQSDYYNFHKRTVGD 207 Query: 180 FVRDARKDGVKAALGNRAMWNEMRMNPTDLGDLSAAVLTYLANGVTPAGNWTALFKPGEK 239 F+ D +G A L +R MW EM+M+PTDL D+S TYL NG P GNWT LF+PGEK Sbjct: 208 FIDDVSANGWAATLADRKMWAEMKMSPTDLADVSGYTYTYLLNGQPPDGNWTGLFRPGEK 267 Query: 240 VRLRCINGSGNTFYDVRVPGLKLKVIQVDGVDIEPVSVDEFRFGPGETCDVVVEPKDE-A 298 +RLR +N S +++DVR+PGLK+ V+ DG +EPVSVDE R ET DV+VEP E A Sbjct: 268 LRLRFVNASAMSYFDVRIPGLKMTVVAADGQHVEPVSVDELRIAVAETYDVIVEPGGERA 327 Query: 299 YTIFAQSMERTGYAMGTLAVRAGLAAPVPDID--------------------------KP 332 YT+FAQSM+R+GYA GTLA+ GL+APVP D +P Sbjct: 328 YTLFAQSMDRSGYARGTLALAEGLSAPVPTPDPRPLIGMDDMGMGGMDHGAMGHGAATRP 387 Query: 333 EWLSMNDMMGDMSSMGGMDHGAMANMPLMNMD--SMSGMD--SMDSMAGGVQPMQGMDHS 388 + M M + GMDH MA M + MD M+GMD MD M GMDHS Sbjct: 388 ASEMDHSKMSGM-DVNGMDHSKMAGMDMSGMDHSKMAGMDMNGMDHSKMAGMDMNGMDHS 446 Query: 389 RHQMASGNPLKVPSKKARHASTEYGAS-TDSKVDSARTNLDDPGVGLRNNGRRVLTLADM 447 R M + +P + H ++E G D + + L DPG+GLR+NGRRVLT AD+ Sbjct: 447 RMGMGA-----MPMQS--HPASEDGNPLVDMQTMTPTPKLADPGLGLRDNGRRVLTYADL 499 Query: 448 HTIGGALDDRGPEREVELHLTGNMERYAWSLDGLEFGKSTPVHFRYGERLRVILHNDTMM 507 + D R P R +ELHLTG+ME++AWS DG++F + P+ YGERLR++L NDTMM Sbjct: 500 RSRFADPDGREPGRTIELHLTGHMEKFAWSFDGIKFSDAEPLRLTYGERLRIVLVNDTMM 559 Query: 508 THPMHLHGLWSELETPNGDFLARRHTIPVQPAQRISFLVTADALGRWAWHCHLMYHMDMG 567 THP+HLHG+WS+LE G+FL R+HTI + P R S+ VTADALGRWA+HCHL++HM+MG Sbjct: 560 THPIHLHGMWSDLEDEQGNFLVRKHTIDMPPGTRRSYRVTADALGRWAYHCHLLFHMEMG 619 Query: 568 MFREVIV 574 MFREV V Sbjct: 620 MFREVRV 626 >XF0132 [Q] COG2132 Putative multicopper oxidases Xfa Xylella fastidiosa 9a5c Length = 611 Score = 577 bits (1488), Expect = e-164, Method: Compositional matrix adjust. Identities = 287/562 (51%), Positives = 374/562 (66%), Gaps = 15/562 (2%) Query: 18 FDLVVAESVVNFTGKQTTATTINGSLPAPTLRWKEGEMVTINVTNKLRE-HTSIHWHGII 76 +L + +S VNFTG+ A T+N SLP P LRW++G+ V I+VTN L + TSIHWHGI+ Sbjct: 58 LELRIGQSSVNFTGRMRPAITVNNSLPGPVLRWRQGDTVQIHVTNTLPDVMTSIHWHGIV 117 Query: 77 LPFRMDGVPGISFAGIAPGETFTYQFKVKQSGTYWYHSHSGMQEQTGMYGAIVIEPIDSG 136 LP MDGVPG+SF GIAPGE + Y+F++ QSGTYWYHSH+ QEQ G+YGA++I+P++ Sbjct: 118 LPSNMDGVPGMSFDGIAPGEHYLYRFQLHQSGTYWYHSHAMFQEQAGLYGALIIDPLEPP 177 Query: 137 KKMVDREHVVLFSDWMDENPMSVLSKLKKQGDFYNLNRLTAGDFVRDARKDGVKAALGNR 196 DREH++LFSDW D +P ++ +LKK + N + T DF D R+DG++ L +R Sbjct: 178 PYRADREHILLFSDWTDLDPAALFRRLKKMSSYDNTYQRTVRDFFHDIRRDGLRTTLADR 237 Query: 197 AMWNEMRMNPTDLGDLSAAVLTYLANGVTPAGNWTALFKPGEKVRLRCINGSGNTFYDVR 256 MW MRM PTDL D++A TYL NG TPAG WT LF+PGEKV LR INGS T++DVR Sbjct: 238 RMWGRMRMTPTDLSDVNAHTYTYLLNGTTPAGAWTGLFRPGEKVLLRLINGSAMTYFDVR 297 Query: 257 VPGLKLKVIQVDGVDIEPVSVDEFRFGPGETCDVVVEPK-DEAYTIFAQSMERTGYAMGT 315 +PGLKL V+ VDG + PV+VDE R ET DV+++P +A+ IFAQ M RTGYA GT Sbjct: 298 IPGLKLTVVAVDGQYVHPVTVDELRIALAETYDVLIQPHGQDAFAIFAQDMGRTGYACGT 357 Query: 316 LAVRAGLAAPVPDIDKPEWLSMNDMMGDMS-SMGGMDHGAMANMPLMNMDSMSGMDSMDS 374 LAVR GL AP+P +D L+M DM M+ G MA+MP M G D Sbjct: 358 LAVRPGLHAPLPALDPRPRLTMQDMGHGMAHGQHGSRASEMADMPGMTHPGRLG----DH 413 Query: 375 MAGGVQ-PMQGMDHSRHQMASGNPLKVPSKKARH-ASTEYGASTDSKVDSARTNLDDPGV 432 + Q P Q + H H + + RH AS + + VD+ + L+DPG+ Sbjct: 414 ASHASQPPAQTIPHGSHSLPADR------TAPRHPASEQNNPLVEMHVDAPQPLLNDPGI 467 Query: 433 GLRNNGRRVLTLADMHTIGGALDDRGPEREVELHLTGNMERYAWSLDGLEFGKSTPVHFR 492 GLR+NGR VLT AD+H++ D R P RE+ELHLTG+ME++AWS DG+ F + P+ Sbjct: 468 GLRDNGRHVLTYADLHSLFDDPDGREPGREIELHLTGHMEKFAWSFDGIPFASAQPLRLN 527 Query: 493 YGERLRVILHNDTMMTHPMHLHGLWSELETPNGDFLARRHTIPVQPAQRISFLVTADALG 552 YGER+R++L NDTMM HP+HLHGLWS+LE N F R+HTI + P R S+ V ADALG Sbjct: 528 YGERVRIVLVNDTMMAHPIHLHGLWSDLEDANAAFQVRKHTIDMPPGTRRSYRVRADALG 587 Query: 553 RWAWHCHLMYHMDMGMFREVIV 574 RWA+HCH++YHM+ GM REV V Sbjct: 588 RWAYHCHMLYHMESGMMREVQV 609 >CC0964 Non COG Length = 570 Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust. Identities = 249/569 (43%), Positives = 336/569 (59%), Gaps = 53/569 (9%) Query: 9 AAPILTGNVFDLVVAESVVNFTGKQTTATTINGSLPAPTLRWKEGEMVTINVTNKLREHT 68 + P L+G L V ++ GK A T+NG++P P +R KEG+ V ++VTN L E T Sbjct: 44 SPPALSGEEIKLTVGHTMAKIDGKAGHAVTVNGAIPGPLIRLKEGQNVRLSVTNTLDEDT 103 Query: 69 SIHWHGIILPFRMDGVPGISFAGIAPGETFTYQFKVKQSGTYWYHSHSGMQEQTGMYGAI 128 SIHWHG+++PF+MDGVPG+SF GI PGETFTY+F ++QSGTYW+HSHSG+QEQ G YG + Sbjct: 104 SIHWHGLLVPFQMDGVPGVSFPGIKPGETFTYEFPIRQSGTYWWHSHSGLQEQMGHYGPM 163 Query: 129 VIEPIDSGKKMVDREHVVLFSDWMDENPMSVLSKLKKQGDFYNLNRLTAGDFVRDARKDG 188 +I+P DREHVV+ SDW +P + KLK +N + T ++ G Sbjct: 164 IIDPAGEDPVAYDREHVVVLSDWSFLHPHELFRKLKVSAGHFNRQKQTVAGLLK-----G 218 Query: 189 VKAALGNRAMWNEMRMNPTDLGDLSAAVLTYLANGVTPAGNWTALFKPGEKVRLRCINGS 248 +L +R W +MRM+PTD+ D++ +V TYL NG P NWT LF PGE+VRLR IN Sbjct: 219 QDQSLKDRVAWGQMRMDPTDIADVTGSVYTYLMNGHGPGDNWTGLFAPGERVRLRFINAG 278 Query: 249 GNTFYDVRVPGLKLKVIQVDGVDIEPVSVDEFRFGPGETCDVVVEP-KDEAYTIFAQSME 307 T ++VR+PGL L+V+ DG + PV+VDEF+ P ET DV+V P +D+A+T+ A++ + Sbjct: 279 AMTIFNVRIPGLSLEVVGTDGQLVSPVAVDEFQIAPAETFDVIVRPTEDKAFTLVAEASD 338 Query: 308 RTGYAMGTLAVRAGLAAPVPDIDKPEWLSMNDMMGDMSSMGGMDHGAMANMPLMNMDSMS 367 R+G A GTLA R G+ A VP + + +M DM MG M HG Sbjct: 339 RSGMARGTLAPRLGMTAAVPPLRRRPLANMKDM-----GMGNMHHG-------------- 379 Query: 368 GMDSMDSMAGGVQPMQGMDHSRHQMASGNPLKVPSKKARHASTEYGASTDSKVDSARTNL 427 MD M GMD S A N VP G T S + R + Sbjct: 380 ----MD--------MPGMDMSMR--AQSNAPNVPLTP--------GVQTISPMPMDR--M 415 Query: 428 DDPGVGLRNNGRRVLTLADMHTIGGALDDRGPEREVELHLTGNMERYAWSLDGLEFGK-S 486 +P GL + G RVLT AD+ ++ D R P R +E+HLTGNMER+ W+ DG FG Sbjct: 416 VEPPQGLEDAGHRVLTYADLASLYPPKDSRAPGRTIEIHLTGNMERFMWAFDGEAFGPLK 475 Query: 487 TPVHFRYGERLRVILHNDTMMTHPMHLHGLWSELETPNG-DFLARRHTIPVQPAQRISFL 545 P+ F+ ER RV+L NDTMM HP+HLHG + EL NG + +HT+ V P +++F Sbjct: 476 KPIAFQRDERARVVLINDTMMAHPIHLHGHFFELV--NGQERQPLKHTVNVAPGGKVAFD 533 Query: 546 VTADALGRWAWHCHLMYHMDMGMFREVIV 574 +TAD G WA+HCH++ HM GMF V V Sbjct: 534 LTADEPGDWAFHCHMLLHMHAGMFNVVTV 562 >Cgl2906 [Q] COG2132 Putative multicopper oxidases Cgl Corynebacterium glutamicum Length = 493 Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 95/285 (33%), Positives = 141/285 (49%), Gaps = 22/285 (7%) Query: 53 GEMVTINVTNKLREHTSIHWHGIILPFRMDGVPGISFAGIAPGETFTYQFKVKQSGTYWY 112 G+++ +++TN+L E TSIHWHGI L DGVPG++ I PGE+F+Y F+V GTY+Y Sbjct: 92 GDVLQVDITNELPESTSIHWHGIALHNAADGVPGMTQDPIEPGESFSYVFEVPHGGTYFY 151 Query: 113 HSHSGMQEQTGMYGAIVI-EPIDSGKKMVDREHVVLFSDWMD---ENPMSVLSKLKKQGD 168 HSH+G+Q G++ ++I +P D+ + D E ++ DW+D P L KL G Sbjct: 152 HSHTGLQLDRGLHAPLIIRDPQDAEDQ--DVEWTIVLDDWVDGIQGTPDDELDKLTGMGS 209 Query: 169 FYNLNRLTAGDFVRDARKDGVKAALGNRAMWNEMRMNPTDLGDLSAAVLTYLANGVTPAG 228 D G R+ D+GD+ YL NG P Sbjct: 210 -------------GDHNGRMGMGGHGQMMHGTPDRVLGGDVGDVMYP--HYLINGRIPRA 254 Query: 229 NWTALFKPGEKVRLRCINGSGNTFYDVRVPGLKLKVIQVDGVDIEPVSVDEFRFGPGETC 288 + T +PG+K RLR IN G+T + V + G ++ V DG ++P + GE Sbjct: 255 HRTFEARPGDKARLRFINSGGDTIFKVALGGHRMTVTHTDGFPVQPWETESIYLSMGERV 314 Query: 289 DVVVEPKDEAYTIFAQSMERTGYAMGTLAVRAGLAAPVPDIDKPE 333 DV V D + + A ++ + A + AG AP PD+D PE Sbjct: 315 DVEVILGDGIFPLTALAVGKDDRAFAVIRT-AGGQAPRPDVDFPE 358 Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 5/114 (4%) Query: 459 PEREVELHLTGNMERYAWSLDGLEFGKSTPVHFRYGERLRVILHNDTMMTHPMHLHGLWS 518 P+REV + L G M Y WS+ L G+S+ + G+RLR+++ N TMM HPMH+HG Sbjct: 382 PDREVSIDLGGQMMPYEWSI--LTDGQSSSATVQEGQRLRMVMRNRTMMPHPMHIHGHTW 439 Query: 519 ELETPNGDFLARRHTIPVQPAQRISFLVTADALGRWAWHCHLMYHMDMGMFREV 572 L G R+ T+ ++ + + + AD G WA+HCH YHM+ GM + Sbjct: 440 ALPGSGG---LRKDTVLLRHGETMIADLIADNPGEWAFHCHNAYHMETGMVSSL 490