BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0031.p         (189 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc3097 [R] COG2249 Putative NADPH-quinone reductase (modulator ...   178   8e-45
CC0205 [R] COG2249 Putative NADPH-quinone reductase (modulator o...   175   6e-44
STM3458 [R] COG2249 Putative NADPH-quinone reductase (modulator ...   147   9e-36
ZyheR [R] COG2249 Putative NADPH-quinone reductase (modulator of...   147   2e-35
YPO0190 [R] COG2249 Putative NADPH-quinone reductase (modulator ...   147   2e-35

>RSc3097 [R] COG2249 Putative NADPH-quinone reductase (modulator of drug
           activity B) Rso Ralstonia solanacearum
          Length = 182

 Score =  178 bits (451), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 89/176 (50%), Positives = 109/176 (61%)

Query: 1   MTTSRILILYAHPAHERSRANRAMIEAARTLPNVRIHDLYECYPDFHIDVDYEQTQLHEA 60
           M   RIL++YAHPA  RSRAN+ +      LP V +HDLY  YP+F IDV  EQ  L  A
Sbjct: 1   MHPPRILVIYAHPAPRRSRANKPLARMLAGLPGVALHDLYWHYPEFDIDVRAEQQALEAA 60

Query: 61  DLIVFHHPIHWYSMPALQKEWTDLVLERGWAFGPGGDALRGKDFWLVASTGGDETSYQPG 120
           DL+V   P+ WY+ P+L KEW D+VLE GWA+GPGG ALRGK   ++A+TGG   +Y   
Sbjct: 61  DLVVLQFPVQWYATPSLLKEWLDVVLEMGWAYGPGGTALRGKHMLVLATTGGRAHAYSRD 120

Query: 121 GRHGHPFDDFLPPYQQTARLCGMQWKTPYLLHGAHQIDNNAMTLHAANYRALLDSY 176
           G HGH FD FL P QQTA LCGM W  P++LH A       +  H    RA L  +
Sbjct: 121 GIHGHAFDLFLLPLQQTAALCGMHWLPPHVLHDADDASPEVLDAHLEQVRASLQPW 176


>CC0205 [R] COG2249 Putative NADPH-quinone reductase (modulator of drug
           activity B) Ccr Caulobacter vibrioides
          Length = 185

 Score =  175 bits (443), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 82/174 (47%), Positives = 112/174 (64%)

Query: 2   TTSRILILYAHPAHERSRANRAMIEAARTLPNVRIHDLYECYPDFHIDVDYEQTQLHEAD 61
            TS +L++ AHPA ERSRANRA+ +AA+ L  V   DLYE YPDF ID++ EQ  L   D
Sbjct: 4   ATSGVLLVLAHPALERSRANRALAKAAKGLSGVTFKDLYEIYPDFVIDIESEQAALSAHD 63

Query: 62  LIVFHHPIHWYSMPALQKEWTDLVLERGWAFGPGGDALRGKDFWLVASTGGDETSYQPGG 121
           ++    P++WYS PAL KEW DLV   G+A+G GG+AL+GK  ++  +TG    +Y   G
Sbjct: 64  VVALQFPLYWYSTPALMKEWLDLVWLHGFAYGEGGEALKGKKLFVACTTGAGAKAYHAHG 123

Query: 122 RHGHPFDDFLPPYQQTARLCGMQWKTPYLLHGAHQIDNNAMTLHAANYRALLDS 175
            +    D+FL P +QTA LCGM W+ P+++HGA   D+ A+   A  YRA + S
Sbjct: 124 YNRFSMDEFLRPLEQTAHLCGMVWEAPFVVHGAAVKDDAALKAEAERYRARVAS 177


>STM3458 [R] COG2249 Putative NADPH-quinone reductase (modulator of drug
           activity B) Sty Salmonella typhimurium LT2
          Length = 183

 Score =  147 bits (372), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 74/166 (44%), Positives = 103/166 (62%)

Query: 4   SRILILYAHPAHERSRANRAMIEAARTLPNVRIHDLYECYPDFHIDVDYEQTQLHEADLI 63
           +++L+LYAHP  + S ANR +++ A    NV +HDLY  YPDF ID  YEQ  L E D+I
Sbjct: 5   AKVLLLYAHPESQDSVANRVLLKPAIQHNNVTVHDLYARYPDFFIDTPYEQALLREHDVI 64

Query: 64  VFHHPIHWYSMPALQKEWTDLVLERGWAFGPGGDALRGKDFWLVASTGGDETSYQPGGRH 123
           VF HP++ YS PAL KEW D VL RG+A GPGG+ L GK +  V +TG  E++Y+    +
Sbjct: 65  VFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLVGKYWRSVITTGEPESAYRYDALN 124

Query: 124 GHPFDDFLPPYQQTARLCGMQWKTPYLLHGAHQIDNNAMTLHAANY 169
            +P  D L P++ TA +C M W  P +++ A +     +  HA  Y
Sbjct: 125 RYPMSDVLRPFELTAAMCRMHWMPPIIVYWARRQSPQTLASHAKAY 170


>ZyheR [R] COG2249 Putative NADPH-quinone reductase (modulator of drug
           activity B) EcZ Escherichia coli O157:H7 EDL933
          Length = 184

 Score =  147 bits (370), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/166 (43%), Positives = 104/166 (62%)

Query: 4   SRILILYAHPAHERSRANRAMIEAARTLPNVRIHDLYECYPDFHIDVDYEQTQLHEADLI 63
           +++L+LYAHP  + S ANR +++ A  L NV +HDLY  YPDF ID+  EQ  L E ++I
Sbjct: 6   AKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHYPDFFIDIPREQALLREHEVI 65

Query: 64  VFHHPIHWYSMPALQKEWTDLVLERGWAFGPGGDALRGKDFWLVASTGGDETSYQPGGRH 123
           VF HP++ YS PAL KEW D VL RG+A GPGG+ L GK +  V +TG  E++Y+    +
Sbjct: 66  VFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAGKYWRSVITTGEPESAYRYDALN 125

Query: 124 GHPFDDFLPPYQQTARLCGMQWKTPYLLHGAHQIDNNAMTLHAANY 169
            +P  D L P++  A +C M W +P +++ A +     +  HA  Y
Sbjct: 126 RYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSAQELASHARXY 171


>YPO0190 [R] COG2249 Putative NADPH-quinone reductase (modulator of drug
           activity B) Ype Yersinia pestis
          Length = 183

 Score =  147 bits (370), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/171 (43%), Positives = 106/171 (61%)

Query: 5   RILILYAHPAHERSRANRAMIEAARTLPNVRIHDLYECYPDFHIDVDYEQTQLHEADLIV 64
           ++L+LYAHP  + S ANR +++  + L +V +HDLY  YPDF ID+ +EQ  L +  +IV
Sbjct: 7   KVLLLYAHPESQDSVANRVLLQPVQQLEHVTVHDLYAHYPDFFIDIHHEQQLLRDHQVIV 66

Query: 65  FHHPIHWYSMPALQKEWTDLVLERGWAFGPGGDALRGKDFWLVASTGGDETSYQPGGRHG 124
           F HP++ YS PAL KEW D VL RG+A G GG AL GK +  V +TG  E +Y+ GG + 
Sbjct: 67  FQHPLYTYSCPALLKEWLDRVLARGFANGVGGHALTGKHWRSVITTGEQEGTYRIGGYNR 126

Query: 125 HPFDDFLPPYQQTARLCGMQWKTPYLLHGAHQIDNNAMTLHAANYRALLDS 175
           +P +D L P++ TA +C M W  P +++ A +     +  HA  Y   L S
Sbjct: 127 YPMEDILRPFELTAAMCHMHWINPMIIYWARRQKPETLASHAQAYVQWLQS 177